RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 ATXN7O15265 892 aaPredicted RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 GRIN3BO60391 1043 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 BRINP1O60477 761 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 EIF4EBP3O60516 100 aaPredicted RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 KATNA1O75449 491 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 RFPL1O75677 317 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 TRPA1O75762 1119 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SMNDC1O75940 238 aaKnown RBP eCLIP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 HTR3BO95264 441 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 U2AF1L5P0DN76 240 aaPredicted RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 ACRP10323 421 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 NME1P15531 152 aaKnown RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 RHOQP17081 205 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 PAX3P23760 479 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 L1CAMP32004 1257 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 RAB27AP51159 221 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 ZNF157P51786 506 aaPredicted RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SIK1P57059 783 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 GPLD1P80108 840 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 U2AF1Q01081 240 aaKnown RBP eCLIP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SLC7A5Q01650 507 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SPEM2Q0P670 501 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 FOXC1Q12948 553 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 NEUROD1Q13562 356 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 MTMR1Q13613 665 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 DHX8Q14562 1220 aaKnown RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 HSP90AA2PQ14568 343 aaPredicted RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 LRRC41Q15345 812 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 DHCR24Q15392 516 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 PCSK7Q16549 785 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 ZNF423Q2M1K9 1284 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 GFOD2Q3B7J2 385 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 BBS9Q3SYG4 887 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SYCP2LQ5T4T6 812 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 FAM102BQ5T8I3 360 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 ZNF697Q5TEC3 545 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 CDCP2Q5VXM1 449 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SPTY2D1Q68D10 685 aaPredicted RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 KIAA1211LQ6NV74 962 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 CNNM4Q6P4Q7 775 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 C11orf96Q7Z7L8 435 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 C14orf80Q86SX3 495 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 ZNF598Q86UK7 904 aaKnown RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 PASD1Q8IV76 773 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 TCEAL8Q8IYN2 117 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SVIPQ8NHG7 77 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 WDR66Q8TBY9 1149 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 GRIN3AQ8TCU5 1115 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 CHMP4CQ96CF2 233 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 EVI5LQ96CN4 794 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 ATG4CQ96DT6 458 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SCYL1Q96KG9 808 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 EXOC2Q96KP1 924 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 CLUHP3Q96NS8 147 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 MPHOSPH6Q99547 160 aaKnown RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 KRTAP3-3Q9BYR6 98 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 KRTAP3-2Q9BYR7 98 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 PUS7LQ9H0K6 701 aaKnown RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 CDH19Q9H159 772 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 RASSF4Q9H2L5 321 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 ANTXR1Q9H6X2 564 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 CNNM2Q9H8M5 875 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 GPAMQ9HCL2 828 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 CACNA2D2Q9NY47 1150 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SLC5A4Q9NY91 659 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 ZIM2Q9NZV7 527 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 MARK1Q9P0L2 795 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 PKD2L1Q9P0L9 805 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 MRPS23Q9Y3D9 190 aaKnown RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SNCAIPQ9Y6H5 919 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 TRBV23-1A0A0A0MS06 115 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 A0A1W2PQU0 124 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 GPR39O43194 453 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 EFCAB14O75071 495 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 GHRHP01286 108 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 CENPBP07199 599 aaPredicted RBP2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 FGFR1P11362 822 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 BMP2P12643 396 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 PTPRAP18433 802 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 SDSP20132 328 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 SUMO1P63165 101 aaKnown RBP2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 HNRNPUQ00839 825 aaKnown RBP eCLIP2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 TNP2Q05952 138 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 PTPN11Q06124 597 aaPredicted RBP2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 PDE4BQ07343 736 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 ITKQ08881 620 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 AP3B2Q13367 1082 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 PIN1Q13526 163 aaPredicted RBP2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 MORC3Q14149 939 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 MLC1Q15049 377 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 ZYXQ15942 572 aaKnown RBP2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 GNPTABQ3T906 1256 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 SV2CQ496J9 727 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 TRIM61Q5EBN2 209 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 FAM209AQ5JX71 171 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 TMEM201Q5SNT2 666 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 ZFYVE27Q5T4F4 411 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 FOXB2Q5VYV0 432 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 OVOS1Q6IE37 1185 aa2.16□□□□□ -2.06
TRAJ39-201ENST00000390498 ADAMTSL4Q6UY14 1074 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms