RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 PABPC4Q13310 644 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRBV4-1-201ENST00000390357 METTL16Q86W50 562 aaKnown RBP16.58■□□□□ 0.24
TRBV4-1-201ENST00000390357 RHPN1Q8TCX5 695 aa16.58■□□□□ 0.24
TRBV4-1-201ENST00000390357 CPA4Q9UI42 421 aa16.58■□□□□ 0.24
TRBV4-1-201ENST00000390357 PNMA3Q9UL41 463 aa16.58■□□□□ 0.24
TRBV4-1-201ENST00000390357 EXOC6BQ9Y2D4 811 aa16.58■□□□□ 0.24
TRBV4-1-201ENST00000390357 PHIPQ8WWQ0 1821 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 MAST2Q6P0Q8 1798 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 RBBP6Q7Z6E9 1792 aaKnown RBP16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 ADGRA2Q96PE1 1338 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 USP17L5A8MUK1 530 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 FMNL1O95466 1100 aaPredicted RBP16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 CYP7A1P22680 504 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 PDE3AQ14432 1141 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 GADL1Q6ZQY3 521 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 AACSQ86V21 672 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 ZNF280CQ8ND82 737 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 TGFBRAP1Q8WUH2 860 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 ZNF333Q96JL9 665 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 TRIM34Q9BYJ4 488 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 AGTPBP1Q9UPW5 1226 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 PTCH2Q9Y6C5 1203 aa16.57■□□□□ 0.24
TRBV4-1-201ENST00000390357 HLA-DOAP06340 250 aa16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 ASNSP08243 561 aa16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 BCRP11274 1271 aa16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 CAPN2P17655 700 aa16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 FCGRTP55899 365 aa16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 CAP1Q01518 475 aa16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 PIH1D3Q9NQM4 214 aaKnown RBP16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 SRRDQ9UH36 339 aa16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 PTPRFP10586 1907 aa16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 MYO5AQ9Y4I1 1855 aaKnown RBP16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 FOCADQ5VW36 1801 aa16.56■□□□□ 0.24
TRBV4-1-201ENST00000390357 TRIM75PA6NK02 468 aa16.55■□□□□ 0.24
TRBV4-1-201ENST00000390357 C19orf81C9J6K1 198 aa16.55■□□□□ 0.24
TRBV4-1-201ENST00000390357 IDH1O75874 414 aaKnown RBP16.55■□□□□ 0.24
TRBV4-1-201ENST00000390357 SPP2Q13103 211 aa16.55■□□□□ 0.24
TRBV4-1-201ENST00000390357 SH3D19Q5HYK7 790 aa16.55■□□□□ 0.24
TRBV4-1-201ENST00000390357 CRACR2BQ8N4Y2 399 aaPredicted RBP16.55■□□□□ 0.24
TRBV4-1-201ENST00000390357 TRIM47Q96LD4 638 aa16.55■□□□□ 0.24
TRBV4-1-201ENST00000390357 WDR18Q9BV38 432 aa16.55■□□□□ 0.24
TRBV4-1-201ENST00000390357 TLR7Q9NYK1 1049 aaKnown RBP16.55■□□□□ 0.24
TRBV4-1-201ENST00000390357 COG6Q9Y2V7 657 aa16.55■□□□□ 0.24
TRBV4-1-201ENST00000390357 FLT1P17948 1338 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 IFIT2P09913 472 aaKnown RBP16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 CYP2C8P10632 490 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 OSBPP22059 807 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 GCLCP48506 637 aaPredicted RBP16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 SLC4A8Q2Y0W8 1093 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 PRPF38BQ5VTL8 546 aaKnown RBP16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 ADGRA1Q86SQ6 560 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 TTC6Q86TZ1 520 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 MAPKAPK5Q8IW41 473 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 RAET1EQ8TD07 263 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 SMCR8Q8TEV9 937 aaPredicted RBP16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 ARHGAP39Q9C0H5 1083 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 ATAD5Q96QE3 1844 aa16.54■□□□□ 0.24
TRBV4-1-201ENST00000390357 MGAMO43451 1857 aa16.53■□□□□ 0.24
TRBV4-1-201ENST00000390357 USP5P45974 858 aa16.53■□□□□ 0.24
TRBV4-1-201ENST00000390357 MAGEB6Q8N7X4 407 aa16.53■□□□□ 0.24
TRBV4-1-201ENST00000390357 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
TRBV4-1-201ENST00000390357 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
TRBV4-1-201ENST00000390357 SLURP2P0DP57 97 aa16.52■□□□□ 0.24
TRBV4-1-201ENST00000390357 NKX2-3Q8TAU0 364 aa16.52■□□□□ 0.24
TRBV4-1-201ENST00000390357 IL1RAPL2Q9NP60 686 aa16.52■□□□□ 0.24
TRBV4-1-201ENST00000390357 PALD1Q9ULE6 856 aa16.52■□□□□ 0.24
TRBV4-1-201ENST00000390357 MYPNQ86TC9 1320 aa16.51■□□□□ 0.23
TRBV4-1-201ENST00000390357 MYH1P12882 1939 aa16.51■□□□□ 0.23
TRBV4-1-201ENST00000390357 FAM196BA6NMK8 535 aa16.51■□□□□ 0.23
TRBV4-1-201ENST00000390357 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
TRBV4-1-201ENST00000390357 GRK4P32298 578 aa16.51■□□□□ 0.23
TRBV4-1-201ENST00000390357 BACE1P56817 501 aa16.51■□□□□ 0.23
TRBV4-1-201ENST00000390357 UBXN2AP68543 259 aa16.51■□□□□ 0.23
TRBV4-1-201ENST00000390357 SIRT2Q8IXJ6 389 aa16.51■□□□□ 0.23
TRBV4-1-201ENST00000390357 EHD4Q9H223 541 aa16.51■□□□□ 0.23
TRBV4-1-201ENST00000390357 TMOD4Q9NZQ9 345 aa16.51■□□□□ 0.23
TRBV4-1-201ENST00000390357 PDE4DIPQ5VU43 2346 aa16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 EN2P19622 333 aaPredicted RBP16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 CTGFP29279 349 aa16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 HOXA7P31268 230 aaPredicted RBP16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 DYNLL1P63167 89 aaKnown RBP16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 IRF5Q13568 498 aa16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 FAM110CQ1W6H9 321 aa16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 TATDN1Q6P1N9 297 aa16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 SLAIN1Q8ND83 568 aa16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 PXYLP1Q8TE99 480 aa16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 COA7Q96BR5 231 aa16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 ANTXR1Q9H6X2 564 aa16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 SERPINB13Q9UIV8 391 aa16.5■□□□□ 0.23
TRBV4-1-201ENST00000390357 KIAA0100Q14667 2235 aaKnown RBP16.49■□□□□ 0.23
TRBV4-1-201ENST00000390357 TNRC18O15417 2968 aaPredicted RBP16.49■□□□□ 0.23
TRBV4-1-201ENST00000390357 MAGEB6P1A0A0J9YX57 407 aa16.49■□□□□ 0.23
TRBV4-1-201ENST00000390357 HMGCS2P54868 508 aa16.49■□□□□ 0.23
TRBV4-1-201ENST00000390357 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
TRBV4-1-201ENST00000390357 SLC9C2Q5TAH2 1124 aa16.49■□□□□ 0.23
TRBV4-1-201ENST00000390357 SH3TC2Q8TF17 1288 aa16.49■□□□□ 0.23
TRBV4-1-201ENST00000390357 GCC1Q96CN9 775 aa16.49■□□□□ 0.23
TRBV4-1-201ENST00000390357 TNPO2O14787 897 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms