RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PTPN12Q05209 780 aaKnown RBP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 PPP2R3AQ06190 1150 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 ZNF211Q13398 564 aaPredicted RBP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 ORC1Q13415 861 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 ZC3H12AQ5D1E8 599 aaKnown RBP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 RPS26P11Q5JNZ5 115 aaPredicted RBP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 PPM1JQ5JR12 505 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 MPRIPQ6WCQ1 1025 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 DTHD1Q6ZMT9 781 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 CDC37L1Q7L3B6 337 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 FAM214BQ7L5A3 538 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 TTC6Q86TZ1 520 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 C12orf40Q86WS4 652 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 NPAS4Q8IUM7 802 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 SULF2Q8IWU5 870 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 ABHD4Q8TB40 342 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 STK35Q8TDR2 534 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 GPBAR1Q8TDU6 330 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 EPS8L3Q8TE67 593 aaKnown RBP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 RELTQ969Z4 430 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 CCDC74AQ96AQ1 378 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 CCDC97Q96F63 343 aaPredicted RBP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 C20orf173Q96LM9 149 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 NIF3L1Q9GZT8 377 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 IRF2BPLQ9H1B7 796 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 EPB41L4BQ9H329 900 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 ZCCHC4Q9H5U6 513 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 WDR26Q9H7D7 661 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 CBX8Q9HC52 389 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 ATP13A1Q9HD20 1204 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 ABCB6Q9NP58 842 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 PRDM5Q9NQX1 630 aaPredicted RBP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 KRT82Q9NSB4 513 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 TMEM39AQ9NV64 488 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 RAPGEFL1Q9UHV5 662 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 SMG5Q9UPR3 1016 aaKnown RBP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 AKAP2Q9Y2D5 859 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 PCDHGC5Q9Y5F6 944 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 PITPNM2Q9BZ72 1349 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 DCDC2CA8MYV0 355 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 PRR33A8MZF0 331 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 RBAK-RBAKDNI3L0D1 243 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 EIF1AYO14602 144 aaKnown RBP1.28□□□□□ -2.2
SNORD28-201ENST00000384706 NDUFB5O43674 189 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 FOXD2O60548 495 aaPredicted RBP1.28□□□□□ -2.2
SNORD28-201ENST00000384706 CBX7O95931 251 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 EOMESO95936 686 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 RAC2P15153 192 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 GLDCP23378 1020 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 ARNTP27540 789 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 CLCN7P51798 805 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 HK2P52789 917 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 ERVFC1P60507 584 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 PDE3BQ13370 1112 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 GRM2Q14416 872 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 TMEM132EQ6IEE7 984 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 UBE3DQ7Z6J8 389 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 PDZD3Q86UT5 571 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 GLYCTKQ8IVS8 523 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 GRIN3AQ8TCU5 1115 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 MYLIPQ8WY64 445 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 UBE2FQ969M7 185 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 ALPK1Q96QP1 1244 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 FOXQ1Q9C009 403 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 PARD6AQ9NPB6 346 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 CD320Q9NPF0 282 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 SEMA3GQ9NS98 782 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 C19orf73Q9NVV2 129 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 NLRP2Q9NX02 1062 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 SLAMF8Q9P0V8 285 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 ZSWIM5Q9P217 1185 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 SERPINA10Q9UK55 444 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 TPX2Q9ULW0 747 aaKnown RBP1.28□□□□□ -2.2
SNORD28-201ENST00000384706 TRAK1Q9UPV9 953 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 CNTNAP4Q9C0A0 1308 aa1.28□□□□□ -2.2
SNORD28-201ENST00000384706 DNAJC25-GNG10A0A024R161 153 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 PRAMEF27A3QJZ7 478 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 ARID3CA6NKF2 412 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 TMEM88BA6NKF7 163 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 H3BRB1 525 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 FANCGO15287 622 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 ICMTO60725 284 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 SLITRK5O94991 958 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 MED14OSP0DP75 135 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 NME2P22392 152 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 NTF4P34130 210 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 TRHRP34981 398 aaPredicted RBP1.27□□□□□ -2.21
SNORD28-201ENST00000384706 LINC00310P59036 64 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 FGD1P98174 961 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 RALGPS1Q5JS13 557 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 SFRP5Q5T4F7 317 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 PHLDB3Q6NSJ2 640 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 PRPF40BQ6NWY9 871 aaKnown RBP1.27□□□□□ -2.21
SNORD28-201ENST00000384706 NXPE4Q6UWF7 544 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 PI16Q6UXB8 463 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 DBX2Q6ZNG2 339 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 ARMCX6Q7L4S7 300 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 ZNF605Q86T29 641 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 MFSD4AQ8N468 514 aa1.27□□□□□ -2.21
SNORD28-201ENST00000384706 RIN3Q8TB24 985 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms