RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 C4AP0C0L4 1744 aa1.79□□□□□ -2.12
RNU6-42P-201ENST00000384165 COL5A3P25940 1745 aaPredicted RBP1.79□□□□□ -2.12
RNU6-42P-201ENST00000384165 ANKRD26Q9UPS8 1709 aa1.79□□□□□ -2.12
RNU6-42P-201ENST00000384165 KMT2EQ8IZD2 1858 aa1.79□□□□□ -2.12
RNU6-42P-201ENST00000384165 ALPK3Q96L96 1907 aa1.79□□□□□ -2.12
RNU6-42P-201ENST00000384165 CSPG4Q6UVK1 2322 aa1.79□□□□□ -2.12
RNU6-42P-201ENST00000384165 OTOGQ6ZRI0 2925 aa1.79□□□□□ -2.12
RNU6-42P-201ENST00000384165 A0A0G2JMZ2 1700 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 KIAA1109Q2LD37 5005 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 USP54Q70EL1 1684 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 ABCC6O95255 1503 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 CDHR2Q9BYE9 1310 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 TRIM43BA6NCK2 446 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 SERINC4A6NH21 518 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 BTBD11A6QL63 1104 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 YDJCA8MPS7 323 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 TBC1D4O60343 1298 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 ALX3O95076 343 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 AFPP02771 609 aaKnown RBP1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 SP9P0CG40 484 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 IL12RB1P42701 662 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 FLT3LGP49771 235 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 RABGGTBP53611 331 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 ZNF252P-AS1Q0IIN9 211 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 SCAPQ12770 1279 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 GRB10Q13322 594 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 PROX2Q3B8N5 592 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 TMEM67Q5HYA8 995 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 PRAMEF18Q5VWM3 479 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 UBALD2Q8IYN6 164 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 FAM26EQ8N5C1 309 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 DNERQ8NFT8 737 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 C7orf43Q8WVR3 580 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 MAP4K1Q92918 833 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 TRIM43Q96BQ3 446 aaPredicted RBP1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 WNK4Q96J92 1243 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 BUD13Q9BRD0 619 aaKnown RBP eCLIP1.78□□□□□ -2.121e-24■■■■■ 56.7
RNU6-42P-201ENST00000384165 BCAS3Q9H6U6 928 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 PARD6AQ9NPB6 346 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 STK26Q9P289 416 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 ZNRF3Q9ULT6 936 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 WASF3Q9UPY6 502 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 AXIN2Q9Y2T1 843 aa1.78□□□□□ -2.12
RNU6-42P-201ENST00000384165 RYR3Q15413 4870 aa1.78□□□□□ -2.13
RNU6-42P-201ENST00000384165 RALGAPA2Q2PPJ7 1873 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 CCDC141Q6ZP82 1450 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 URB1O60287 2271 aaKnown RBP1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 ZNF521Q96K83 1311 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 MYBBP1AQ9BQG0 1328 aaKnown RBP1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 PCDH11YQ9BZA8 1340 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 TEX51A0A1B0GUA7 166 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 TESPA1A2RU30 521 aaPredicted RBP1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 TM4SF5O14894 197 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 SPTLC1O15269 473 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 NCK2O43639 380 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 HYAL3O43820 417 aaPredicted RBP1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 GDF9O60383 454 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 LRP3O75074 770 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 PEPDP12955 493 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 ICAM3P32942 547 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 ABCG1P45844 678 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 TDGQ13569 410 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 LBRQ14739 615 aaKnown RBP1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 PTPN21Q16825 1174 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 AASDHQ4L235 1098 aaPredicted RBP1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 LDLRAD1Q5T700 205 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 RC3H1Q5TC82 1133 aaKnown RBP1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 LHX8Q68G74 356 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 ATG14Q6ZNE5 492 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 PRR23CQ6ZRP0 262 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 GPR155Q7Z3F1 870 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 KRT25Q7Z3Z0 450 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 SH3RF1Q7Z6J0 888 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 MCUQ8NE86 351 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 WBP1Q96G27 269 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 NLRP3Q96P20 1036 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 PSMD1Q99460 953 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 TMX4Q9H1E5 349 aaPredicted RBP1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 SRP68Q9UHB9 627 aaKnown RBP1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 DENND2AQ9ULE3 1009 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 GABRQQ9UN88 632 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 TBC1D2BQ9UPU7 963 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 HYDINQ4G0P3 5121 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 KDM3BQ7LBC6 1761 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 E9PCH4 1651 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 KIF1AQ12756 1690 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 ALS2Q96Q42 1657 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 QRICH2Q9H0J4 1663 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 CHD9Q3L8U1 2897 aa1.77□□□□□ -2.13
RNU6-42P-201ENST00000384165 NPC1L1Q9UHC9 1359 aa1.76□□□□□ -2.13
RNU6-42P-201ENST00000384165 VPS37CA5D8V6 355 aaPredicted RBP1.76□□□□□ -2.13
RNU6-42P-201ENST00000384165 KIAA1324LA8MWY0 1029 aaPredicted RBP1.76□□□□□ -2.13
RNU6-42P-201ENST00000384165 LOC730098B7Z3J9 87 aa1.76□□□□□ -2.13
RNU6-42P-201ENST00000384165 APBB1O00213 710 aa1.76□□□□□ -2.13
RNU6-42P-201ENST00000384165 PI15O43692 258 aa1.76□□□□□ -2.13
RNU6-42P-201ENST00000384165 RAD17O75943 681 aa1.76□□□□□ -2.13
RNU6-42P-201ENST00000384165 FGBP02675 491 aa1.76□□□□□ -2.13
RNU6-42P-201ENST00000384165 CAPNS1P04632 268 aa1.76□□□□□ -2.13
RNU6-42P-201ENST00000384165 SRGNP10124 158 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms