RNA–Protein interactions for RNA: ENST00000383829.6

BRPF1-201, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-201ENST00000383829 IFNL3Q8IZI9 196 aa19.4■□□□□ 0.7
BRPF1-201ENST00000383829 GOLGA6L10A0A0M3HER8 536 aa19.39■□□□□ 0.7
BRPF1-201ENST00000383829 GNPATO15228 680 aa19.39■□□□□ 0.7
BRPF1-201ENST00000383829 RBM6P78332 1123 aaKnown RBP19.39■□□□□ 0.7
BRPF1-201ENST00000383829 LMTK2Q8IWU2 1503 aa19.39■□□□□ 0.7
BRPF1-201ENST00000383829 LRRC7Q96NW7 1537 aa19.39■□□□□ 0.7
BRPF1-201ENST00000383829 POLR1AO95602 1720 aaPredicted RBP19.39■□□□□ 0.69
BRPF1-201ENST00000383829 PRAMEF22A3QJZ6 481 aa19.39■□□□□ 0.69
BRPF1-201ENST00000383829 IVLP07476 585 aa19.39■□□□□ 0.69
BRPF1-201ENST00000383829 MRPL12P52815 198 aaKnown RBP19.39■□□□□ 0.69
BRPF1-201ENST00000383829 SASH1O94885 1247 aa19.39■□□□□ 0.69
BRPF1-201ENST00000383829 RHOXF2BP0C7M4 288 aa19.39■□□□□ 0.69
BRPF1-201ENST00000383829 PDE4DQ08499 809 aa19.39■□□□□ 0.69
BRPF1-201ENST00000383829 CYP26C1Q6V0L0 522 aa19.39■□□□□ 0.69
BRPF1-201ENST00000383829 TMTC1Q8IUR5 882 aa19.39■□□□□ 0.69
BRPF1-201ENST00000383829 RHOXF2Q9BQY4 288 aa19.39■□□□□ 0.69
BRPF1-201ENST00000383829 RTEL1Q9NZ71 1219 aa19.39■□□□□ 0.69
BRPF1-201ENST00000383829 OPA1O60313 960 aa19.38■□□□□ 0.69
BRPF1-201ENST00000383829 PPARAQ07869 468 aa19.38■□□□□ 0.69
BRPF1-201ENST00000383829 SMAP1Q8IYB5 467 aaPredicted RBP19.38■□□□□ 0.69
BRPF1-201ENST00000383829 TDRD7Q8NHU6 1098 aaKnown RBP19.38■□□□□ 0.69
BRPF1-201ENST00000383829 C8orf37Q96NL8 207 aa19.38■□□□□ 0.69
BRPF1-201ENST00000383829 MTX1Q13505 466 aa19.38■□□□□ 0.69
BRPF1-201ENST00000383829 ZRSR2Q15696 482 aaKnown RBP19.38■□□□□ 0.69
BRPF1-201ENST00000383829 CARD6Q9BX69 1037 aa19.38■□□□□ 0.69
BRPF1-201ENST00000383829 AATFQ9NY61 560 aaKnown RBP eCLIP19.38■□□□□ 0.69
BRPF1-201ENST00000383829 MRVI1Q9Y6F6 885 aa19.38■□□□□ 0.69
BRPF1-201ENST00000383829 ANKARQ7Z5J8 1434 aa19.38■□□□□ 0.69
BRPF1-201ENST00000383829 KRT13P13646 458 aa19.38■□□□□ 0.69
BRPF1-201ENST00000383829 SPECC1LQ69YQ0 1117 aa19.38■□□□□ 0.69
BRPF1-201ENST00000383829 NSUN7Q8NE18 718 aaKnown RBP19.38■□□□□ 0.69
BRPF1-201ENST00000383829 LMBR1Q8WVP7 490 aa19.38■□□□□ 0.69
BRPF1-201ENST00000383829 NOC4LQ9BVI4 516 aaKnown RBP19.38■□□□□ 0.69
BRPF1-201ENST00000383829 MAP2K1Q02750 393 aaPredicted RBP19.37■□□□□ 0.69
BRPF1-201ENST00000383829 PNOCQ13519 176 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 KIAA0753Q2KHM9 967 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 CNNM4Q6P4Q7 775 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 CTNNBL1Q8WYA6 563 aaPredicted RBP19.37■□□□□ 0.69
BRPF1-201ENST00000383829 CAPZA3Q96KX2 299 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 NAPGQ99747 312 aaPredicted RBP19.37■□□□□ 0.69
BRPF1-201ENST00000383829 ATG3Q9NT62 314 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 PTPN12Q05209 780 aaKnown RBP19.37■□□□□ 0.69
BRPF1-201ENST00000383829 LRMPQ12912 555 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 PLVAPQ9BX97 442 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 TSGA10Q9BZW7 698 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 CCDC174Q6PII3 467 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 VPS54Q9P1Q0 977 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 SERTAD1Q9UHV2 236 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 ELF2Q15723 593 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 CSGALNACT2Q8N6G5 542 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 CNBD1Q8NA66 436 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 MAP3K15Q6ZN16 1313 aa19.37■□□□□ 0.69
BRPF1-201ENST00000383829 PDE8BO95263 885 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 PRPHP41219 470 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 ARID5AQ03989 594 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 PUS3Q9BZE2 481 aaKnown RBP19.36■□□□□ 0.69
BRPF1-201ENST00000383829 MACROD2A1Z1Q3 448 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 ANKRD62A6NC57 917 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 HS2ST1Q7LGA3 356 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 TRMT1LQ7Z2T5 733 aaKnown RBP19.36■□□□□ 0.69
BRPF1-201ENST00000383829 HDXQ7Z353 690 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 USP37Q86T82 979 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 CCDC65Q8IXS2 484 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 FANCBQ8NB91 859 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 BCL2L12Q9HB09 334 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 MAST3O60307 1309 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 MAPK8IP1Q9UQF2 711 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 U2AF2P26368 475 aaKnown RBP eCLIP19.36■□□□□ 0.69
BRPF1-201ENST00000383829 TRAPPC3LQ5T215 181 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 RNF187Q5TA31 235 aaPredicted RBP19.36■□□□□ 0.69
BRPF1-201ENST00000383829 KRT25Q7Z3Z0 450 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 LZTS2Q9BRK4 669 aa19.36■□□□□ 0.69
BRPF1-201ENST00000383829 KRT9P35527 623 aa19.35■□□□□ 0.69
BRPF1-201ENST00000383829 TMEM87AQ8NBN3 555 aa19.35■□□□□ 0.69
BRPF1-201ENST00000383829 TULP4Q9NRJ4 1543 aa19.35■□□□□ 0.69
BRPF1-201ENST00000383829 CAPN2P17655 700 aa19.35■□□□□ 0.69
BRPF1-201ENST00000383829 GIGYF2Q6Y7W6 1299 aaKnown RBP19.35■□□□□ 0.69
BRPF1-201ENST00000383829 NUP58Q9BVL2 599 aa19.35■□□□□ 0.69
BRPF1-201ENST00000383829 RCOR1Q9UKL0 485 aa19.35■□□□□ 0.69
BRPF1-201ENST00000383829 LARGE1O95461 756 aa19.35■□□□□ 0.69
BRPF1-201ENST00000383829 NDUFA8P51970 172 aa19.35■□□□□ 0.69
BRPF1-201ENST00000383829 SMC1AQ14683 1233 aaKnown RBP19.35■□□□□ 0.69
BRPF1-201ENST00000383829 NONOQ15233 471 aaKnown RBP eCLIP19.35■□□□□ 0.69
BRPF1-201ENST00000383829 SAP30BPQ9UHR5 308 aaKnown RBP19.35■□□□□ 0.69
BRPF1-201ENST00000383829 CHMP4BP1P59074 171 aa19.34■□□□□ 0.69
BRPF1-201ENST00000383829 LRRC8AQ8IWT6 810 aa19.34■□□□□ 0.69
BRPF1-201ENST00000383829 TRIML1Q8N9V2 468 aa19.34■□□□□ 0.69
BRPF1-201ENST00000383829 MED23Q9ULK4 1368 aa19.34■□□□□ 0.69
BRPF1-201ENST00000383829 TRAF5O00463 557 aa19.34■□□□□ 0.69
BRPF1-201ENST00000383829 VAV2P52735 878 aa19.34■□□□□ 0.69
BRPF1-201ENST00000383829 TRMT44Q8IYL2 757 aaKnown RBP19.34■□□□□ 0.69
BRPF1-201ENST00000383829 CNKSR2Q8WXI2 1034 aa19.34■□□□□ 0.69
BRPF1-201ENST00000383829 ADORA1P30542 326 aa19.34■□□□□ 0.69
BRPF1-201ENST00000383829 CLEC17AQ6ZS10 378 aa19.34■□□□□ 0.69
BRPF1-201ENST00000383829 NCAPD2Q15021 1401 aa19.34■□□□□ 0.69
BRPF1-201ENST00000383829 UFL1O94874 794 aa19.33■□□□□ 0.69
BRPF1-201ENST00000383829 RPL13P26373 211 aaKnown RBP19.33■□□□□ 0.69
BRPF1-201ENST00000383829 EYA3Q99504 573 aa19.33■□□□□ 0.69
BRPF1-201ENST00000383829 CARMIL3Q8ND23 1372 aa19.33■□□□□ 0.69
BRPF1-201ENST00000383829 KRBA2Q6ZNG9 492 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms