RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 MAP3K19Q56UN5 1328 aa23.75■■□□□ 1.39
NKX3-2-201ENST00000382438 KLHL33A6NCF5 533 aa23.75■■□□□ 1.39
NKX3-2-201ENST00000382438 RASSF9O75901 435 aa23.75■■□□□ 1.39
NKX3-2-201ENST00000382438 MRPS25P82663 173 aaKnown RBP23.75■■□□□ 1.39
NKX3-2-201ENST00000382438 POGZQ7Z3K3 1410 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 PEX19P40855 299 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 ARHGAP25P42331 645 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 SMTNP53814 917 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 IFT88Q13099 833 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 SND1Q7KZF4 910 aaKnown RBP eCLIP23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 FAM228AQ86W67 206 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 ZNF483Q8TF39 744 aaPredicted RBP23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 SH3BP1Q9Y3L3 701 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 CDR1P51861 262 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 CCNI2Q6ZMN8 369 aaPredicted RBP23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 MED15Q96RN5 788 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 SLF1Q9BQI6 1058 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 VCPKMTQ9H867 229 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 TFR2Q9UP52 801 aa23.74■■□□□ 1.39
NKX3-2-201ENST00000382438 A0A1B0GUA9 196 aa23.73■■□□□ 1.39
NKX3-2-201ENST00000382438 GCKP35557 465 aa23.73■■□□□ 1.39
NKX3-2-201ENST00000382438 KIF9Q9HAQ2 790 aa23.73■■□□□ 1.39
NKX3-2-201ENST00000382438 TTF2Q9UNY4 1162 aaKnown RBP23.73■■□□□ 1.39
NKX3-2-201ENST00000382438 MYO1BO43795 1136 aa23.72■■□□□ 1.39
NKX3-2-201ENST00000382438 HDGFP51858 240 aaKnown RBP23.72■■□□□ 1.39
NKX3-2-201ENST00000382438 FXR1P51114 621 aaKnown RBP eCLIP23.72■■□□□ 1.39
NKX3-2-201ENST00000382438 TTMPQ5BVD1 217 aa23.72■■□□□ 1.39
NKX3-2-201ENST00000382438 SLC9C2Q5TAH2 1124 aa23.72■■□□□ 1.39
NKX3-2-201ENST00000382438 KLHDC4Q8TBB5 520 aa23.72■■□□□ 1.39
NKX3-2-201ENST00000382438 U3KPZ7 1027 aaPredicted RBP23.72■■□□□ 1.39
NKX3-2-201ENST00000382438 EDC4Q6P2E9 1401 aaKnown RBP23.72■■□□□ 1.39
NKX3-2-201ENST00000382438 MCM3P25205 808 aa23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 AMPHP49418 695 aa23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 GRIK3Q13003 919 aa23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 SNCBQ16143 134 aa23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 NAA35Q5VZE5 725 aa23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 HPSEQ9Y251 543 aa23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 ATP1A1P05023 1023 aaKnown RBP23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 SEC24CP53992 1094 aa23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 NAP1L1P55209 391 aaKnown RBP23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 ERVK-24P63145 666 aa23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 CCDC102BQ68D86 513 aa23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 C9orf78Q9NZ63 289 aaPredicted RBP23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 MAN1B1Q9UKM7 699 aa23.71■■□□□ 1.39
NKX3-2-201ENST00000382438 GUCY1A3Q02108 690 aa23.7■■□□□ 1.39
NKX3-2-201ENST00000382438 SLC39A14Q15043 492 aa23.7■■□□□ 1.39
NKX3-2-201ENST00000382438 STK11IPQ8N1F8 1099 aa23.7■■□□□ 1.39
NKX3-2-201ENST00000382438 JCADQ9P266 1359 aa23.7■■□□□ 1.38
NKX3-2-201ENST00000382438 MFAP3LO75121 409 aa23.7■■□□□ 1.38
NKX3-2-201ENST00000382438 CDC25AP30304 524 aa23.7■■□□□ 1.38
NKX3-2-201ENST00000382438 GBP2P32456 591 aaPredicted RBP23.7■■□□□ 1.38
NKX3-2-201ENST00000382438 G3BP1Q13283 466 aaKnown RBP eCLIP23.7■■□□□ 1.38
NKX3-2-201ENST00000382438 TRAPPC11Q7Z392 1133 aa23.7■■□□□ 1.38
NKX3-2-201ENST00000382438 GRAMD1CQ8IYS0 662 aa23.7■■□□□ 1.38
NKX3-2-201ENST00000382438 ZNF526Q8TF50 670 aaPredicted RBP23.7■■□□□ 1.38
NKX3-2-201ENST00000382438 NAA15Q9BXJ9 866 aaKnown RBP23.7■■□□□ 1.38
NKX3-2-201ENST00000382438 CPS1P31327 1500 aa23.7■■□□□ 1.38
NKX3-2-201ENST00000382438 TMCO5BA8MYB1 307 aa23.69■■□□□ 1.38
NKX3-2-201ENST00000382438 STX17P56962 302 aa23.69■■□□□ 1.38
NKX3-2-201ENST00000382438 PARP9Q8IXQ6 854 aa23.69■■□□□ 1.38
NKX3-2-201ENST00000382438 CCDC114Q96M63 670 aa23.69■■□□□ 1.38
NKX3-2-201ENST00000382438 A0A1B0GTH6 734 aa23.69■■□□□ 1.38
NKX3-2-201ENST00000382438 EZRP15311 586 aaKnown RBP23.69■■□□□ 1.38
NKX3-2-201ENST00000382438 NUTM2AQ8IVF1 878 aaPredicted RBP23.69■■□□□ 1.38
NKX3-2-201ENST00000382438 ZNF185O15231 689 aa23.69■■□□□ 1.38
NKX3-2-201ENST00000382438 AP1G2O75843 785 aa23.69■■□□□ 1.38
NKX3-2-201ENST00000382438 ARMC2Q8NEN0 867 aa23.69■■□□□ 1.38
NKX3-2-201ENST00000382438 CLTCQ00610 1675 aaKnown RBP23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 LMTK2Q8IWU2 1503 aa23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 GOLGA8KD6RF30 607 aa23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 CCDC9Q9Y3X0 531 aaKnown RBP23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 EXOSC10Q01780 885 aaKnown RBP23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 C2orf54Q08AI8 447 aa23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 ZKSCAN8Q15776 578 aaPredicted RBP23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 EZH2Q15910 746 aaKnown RBP23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 KLHL10Q6JEL2 608 aa23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 CYB5D1Q6P9G0 228 aa23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 CHPF2Q9P2E5 772 aa23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 TPX2Q9ULW0 747 aaKnown RBP23.68■■□□□ 1.38
NKX3-2-201ENST00000382438 RNF225M0QZC1 329 aaPredicted RBP23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 HDLBPQ00341 1268 aaKnown RBP23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 AP1ARQ63HQ0 302 aa23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 CAGE1Q8TC20 777 aa23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 ENOX1Q8TC92 643 aaKnown RBP23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 ZNF473Q8WTR7 871 aaKnown RBP23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 HDAC7Q8WUI4 952 aa23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 KCNH3Q9ULD8 1083 aa23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 ATXN2Q99700 1313 aaKnown RBP23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 APBA1Q02410 837 aa23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 MICALCLQ6ZW33 695 aa23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 PARD3BQ8TEW8 1205 aa23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 SAR1BQ9Y6B6 198 aa23.67■■□□□ 1.38
NKX3-2-201ENST00000382438 GYPCP04921 128 aa23.66■■□□□ 1.38
NKX3-2-201ENST00000382438 SPRED3Q2MJR0 410 aa23.66■■□□□ 1.38
NKX3-2-201ENST00000382438 TLDC1Q6P9B6 456 aa23.66■■□□□ 1.38
NKX3-2-201ENST00000382438 TICAM2Q86XR7 235 aa23.66■■□□□ 1.38
NKX3-2-201ENST00000382438 TATDN2Q93075 761 aa23.66■■□□□ 1.38
NKX3-2-201ENST00000382438 SPDL1Q96EA4 605 aa23.66■■□□□ 1.38
NKX3-2-201ENST00000382438 RNPC3Q96LT9 517 aaKnown RBP23.66■■□□□ 1.38
NKX3-2-201ENST00000382438 AIFM3Q96NN9 605 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms