RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 PIH1D3Q9NQM4 214 aaKnown RBP17.37■□□□□ 0.37
SHOX-202ENST00000381575 EXOC6BQ9Y2D4 811 aa17.37■□□□□ 0.37
SHOX-202ENST00000381575 PRPF38BQ5VTL8 546 aaKnown RBP17.36■□□□□ 0.37
SHOX-202ENST00000381575 EAF2Q96CJ1 260 aaPredicted RBP17.36■□□□□ 0.37
SHOX-202ENST00000381575 PARK7Q99497 189 aaKnown RBP17.36■□□□□ 0.37
SHOX-202ENST00000381575 NOP58Q9Y2X3 529 aaKnown RBP17.36■□□□□ 0.37
SHOX-202ENST00000381575 LOC285556D6RIA3 1793 aa17.36■□□□□ 0.37
SHOX-202ENST00000381575 FMNL1O95466 1100 aaPredicted RBP17.35■□□□□ 0.37
SHOX-202ENST00000381575 OSBPP22059 807 aa17.35■□□□□ 0.37
SHOX-202ENST00000381575 SLC4A8Q2Y0W8 1093 aa17.35■□□□□ 0.37
SHOX-202ENST00000381575 MAPKAPK5Q8IW41 473 aa17.35■□□□□ 0.37
SHOX-202ENST00000381575 NOL10Q9BSC4 688 aaKnown RBP17.35■□□□□ 0.37
SHOX-202ENST00000381575 COL2A1P02458 1487 aaPredicted RBP17.35■□□□□ 0.37
SHOX-202ENST00000381575 BCRP11274 1271 aa17.34■□□□□ 0.37
SHOX-202ENST00000381575 DYNLL1P63167 89 aaKnown RBP17.34■□□□□ 0.37
SHOX-202ENST00000381575 NBPF11Q86T75 865 aa17.34■□□□□ 0.37
SHOX-202ENST00000381575 TGFBRAP1Q8WUH2 860 aa17.34■□□□□ 0.37
SHOX-202ENST00000381575 TMEM106CQ9BVX2 250 aa17.34■□□□□ 0.37
SHOX-202ENST00000381575 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
SHOX-202ENST00000381575 TBC1D12O60347 775 aa17.33■□□□□ 0.36
SHOX-202ENST00000381575 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
SHOX-202ENST00000381575 SHROOM1Q2M3G4 852 aaPredicted RBP17.33■□□□□ 0.36
SHOX-202ENST00000381575 TREML2Q5T2D2 321 aa17.33■□□□□ 0.36
SHOX-202ENST00000381575 FASTKD5Q7L8L6 764 aaKnown RBP17.33■□□□□ 0.36
SHOX-202ENST00000381575 SRRDQ9UH36 339 aa17.33■□□□□ 0.36
SHOX-202ENST00000381575 SAP30BPQ9UHR5 308 aaKnown RBP17.33■□□□□ 0.36
SHOX-202ENST00000381575 MYPNQ86TC9 1320 aa17.33■□□□□ 0.36
SHOX-202ENST00000381575 APBB1O00213 710 aa17.32■□□□□ 0.36
SHOX-202ENST00000381575 IDH1O75874 414 aaKnown RBP17.32■□□□□ 0.36
SHOX-202ENST00000381575 SLC34A2O95436 690 aa17.32■□□□□ 0.36
SHOX-202ENST00000381575 MTFR1Q15390 333 aa17.32■□□□□ 0.36
SHOX-202ENST00000381575 IL1RAPL2Q9NP60 686 aa17.32■□□□□ 0.36
SHOX-202ENST00000381575 FLT1P17948 1338 aa17.32■□□□□ 0.36
SHOX-202ENST00000381575 BAG3O95817 575 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 MAP4K4O95819 1239 aaPredicted RBP17.31■□□□□ 0.36
SHOX-202ENST00000381575 CYP7A1P22680 504 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 PRKCZQ05513 592 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 SPP2Q13103 211 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 AACSQ86V21 672 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 MIGA1Q8NAN2 632 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 RAET1EQ8TD07 263 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 ANTXR1Q9H6X2 564 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 DNAJC18Q9H819 358 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 PALD1Q9ULE6 856 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 GABRQQ9UN88 632 aa17.31■□□□□ 0.36
SHOX-202ENST00000381575 GNRH1P01148 92 aa17.3■□□□□ 0.36
SHOX-202ENST00000381575 CAP2P40123 477 aa17.3■□□□□ 0.36
SHOX-202ENST00000381575 HMGCS2P54868 508 aa17.3■□□□□ 0.36
SHOX-202ENST00000381575 PPP4CP60510 307 aa17.3■□□□□ 0.36
SHOX-202ENST00000381575 JAG1P78504 1218 aa17.3■□□□□ 0.36
SHOX-202ENST00000381575 SMCR8Q8TEV9 937 aaPredicted RBP17.3■□□□□ 0.36
SHOX-202ENST00000381575 ZNF512BQ96KM6 892 aaPredicted RBP17.3■□□□□ 0.36
SHOX-202ENST00000381575 AGTPBP1Q9UPW5 1226 aa17.3■□□□□ 0.36
SHOX-202ENST00000381575 COG6Q9Y2V7 657 aa17.3■□□□□ 0.36
SHOX-202ENST00000381575 NAV1Q8NEY1 1877 aa17.3■□□□□ 0.36
SHOX-202ENST00000381575 GDF11O95390 407 aa17.29■□□□□ 0.36
SHOX-202ENST00000381575 PLCG2P16885 1265 aa17.29■□□□□ 0.36
SHOX-202ENST00000381575 FCGRTP55899 365 aa17.29■□□□□ 0.36
SHOX-202ENST00000381575 MAGEB6Q8N7X4 407 aa17.29■□□□□ 0.36
SHOX-202ENST00000381575 ZNF280CQ8ND82 737 aa17.29■□□□□ 0.36
SHOX-202ENST00000381575 HOXD10P28358 340 aa17.28■□□□□ 0.36
SHOX-202ENST00000381575 GRK4P32298 578 aa17.28■□□□□ 0.36
SHOX-202ENST00000381575 PRMT2P55345 433 aa17.28■□□□□ 0.36
SHOX-202ENST00000381575 ANKRD13CQ8N6S4 541 aa17.28■□□□□ 0.36
SHOX-202ENST00000381575 PI4KBQ9UBF8 816 aa17.28■□□□□ 0.36
SHOX-202ENST00000381575 BIN2Q9UBW5 565 aaPredicted RBP17.28■□□□□ 0.36
SHOX-202ENST00000381575 HERC5Q9UII4 1024 aaKnown RBP17.28■□□□□ 0.36
SHOX-202ENST00000381575 USP17L5A8MUK1 530 aa17.28■□□□□ 0.36
SHOX-202ENST00000381575 CRACR2BQ8N4Y2 399 aaPredicted RBP17.28■□□□□ 0.36
SHOX-202ENST00000381575 DHX36Q9H2U1 1008 aaKnown RBP17.28■□□□□ 0.36
SHOX-202ENST00000381575 SLC45A1Q9Y2W3 748 aa17.28■□□□□ 0.36
SHOX-202ENST00000381575 TRIOBPQ9H2D6 2365 aa17.27■□□□□ 0.36
SHOX-202ENST00000381575 MTMR2Q13614 643 aa17.27■□□□□ 0.35
SHOX-202ENST00000381575 ERC1Q8IUD2 1116 aa17.27■□□□□ 0.35
SHOX-202ENST00000381575 PROCA1Q8NCQ7 364 aaPredicted RBP17.27■□□□□ 0.35
SHOX-202ENST00000381575 RHPN1Q8TCX5 695 aa17.27■□□□□ 0.35
SHOX-202ENST00000381575 SHISA4Q96DD7 197 aa17.27■□□□□ 0.35
SHOX-202ENST00000381575 TRIM34Q9BYJ4 488 aa17.27■□□□□ 0.35
SHOX-202ENST00000381575 TAOK2Q9UL54 1235 aa17.27■□□□□ 0.35
SHOX-202ENST00000381575 DDX60LQ5H9U9 1706 aaKnown RBP17.26■□□□□ 0.35
SHOX-202ENST00000381575 TNPO2O14787 897 aaKnown RBP17.26■□□□□ 0.35
SHOX-202ENST00000381575 ELNP15502 786 aa17.26■□□□□ 0.35
SHOX-202ENST00000381575 FLT3LGP49771 235 aa17.26■□□□□ 0.35
SHOX-202ENST00000381575 SIRT2Q8IXJ6 389 aa17.26■□□□□ 0.35
SHOX-202ENST00000381575 MYH7P12883 1935 aa17.25■□□□□ 0.35
SHOX-202ENST00000381575 PLXNB2O15031 1838 aa17.25■□□□□ 0.35
SHOX-202ENST00000381575 PEX10O60683 326 aa17.25■□□□□ 0.35
SHOX-202ENST00000381575 CCL5P13501 91 aa17.25■□□□□ 0.35
SHOX-202ENST00000381575 USP5P45974 858 aa17.25■□□□□ 0.35
SHOX-202ENST00000381575 ASCC2Q9H1I8 757 aaPredicted RBP17.25■□□□□ 0.35
SHOX-202ENST00000381575 PNMA3Q9UL41 463 aa17.25■□□□□ 0.35
SHOX-202ENST00000381575 MYH8P13535 1937 aa17.25■□□□□ 0.35
SHOX-202ENST00000381575 BAZ2AQ9UIF9 1905 aaKnown RBP17.25■□□□□ 0.35
SHOX-202ENST00000381575 ADCY3O60266 1144 aa17.24■□□□□ 0.35
SHOX-202ENST00000381575 HLA-DOAP06340 250 aa17.24■□□□□ 0.35
SHOX-202ENST00000381575 ASNSP08243 561 aa17.24■□□□□ 0.35
SHOX-202ENST00000381575 MAP3K12Q12852 859 aa17.24■□□□□ 0.35
SHOX-202ENST00000381575 METTL16Q86W50 562 aaKnown RBP17.24■□□□□ 0.35
SHOX-202ENST00000381575 EDC3Q96F86 508 aaKnown RBP17.24■□□□□ 0.35
SHOX-202ENST00000381575 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms