RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00654-201ENST00000379053 NUP153P49790 1475 aaKnown RBP12.23□□□□□ -0.45
LINC00654-201ENST00000379053 PSMC4P43686 418 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
LINC00654-201ENST00000379053 KRT25Q7Z3Z0 450 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 SNX29Q8TEQ0 813 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 ANO3Q9BYT9 981 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 MTUS1Q9ULD2 1270 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 LUC7L2Q9Y383 392 aaKnown RBP12.23□□□□□ -0.45
LINC00654-201ENST00000379053 LZTS2Q9BRK4 669 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 DNM3Q9UQ16 869 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 TESPA1A2RU30 521 aaPredicted RBP12.23□□□□□ -0.45
LINC00654-201ENST00000379053 ALAS1P13196 640 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 TNFAIP3P21580 790 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 PPP1R2P41236 205 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 NCAPG2Q86XI2 1143 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 SUCLG2Q96I99 432 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 LRWD1Q9UFC0 647 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 SKILP12757 684 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 CD19P15391 556 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 KLHL40Q2TBA0 621 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 LIN9Q5TKA1 542 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 ARHGEF16Q5VV41 709 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 CNNM4Q6P4Q7 775 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 FBXO41Q8TF61 875 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 IBTKQ9P2D0 1353 aaPredicted RBP12.22□□□□□ -0.45
LINC00654-201ENST00000379053 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 SEL1L2Q5TEA6 688 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 ANKRD35Q8N283 1001 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 ZNF532Q9HCE3 1301 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 EDC4Q6P2E9 1401 aaKnown RBP12.22□□□□□ -0.45
LINC00654-201ENST00000379053 SPOPO43791 374 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 MYCT1Q8N699 235 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 ZAP70P43403 619 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 ZSCAN23Q3MJ62 389 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 NSMCE1Q8WV22 266 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 PPP1R9BQ96SB3 815 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 NOC4LQ9BVI4 516 aaKnown RBP12.22□□□□□ -0.45
LINC00654-201ENST00000379053 CARD14Q9BXL6 1004 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 PRPF6O94906 941 aaKnown RBP12.22□□□□□ -0.45
LINC00654-201ENST00000379053 MAP7D1Q3KQU3 841 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 CCDC125Q86Z20 511 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 STMN4Q9H169 189 aaPredicted RBP12.22□□□□□ -0.45
LINC00654-201ENST00000379053 GUCA1BQ9UMX6 200 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 NOC2LQ9Y3T9 749 aaKnown RBP12.22□□□□□ -0.45
LINC00654-201ENST00000379053 CETN3O15182 167 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 USPL1Q5W0Q7 1092 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 PPP1R21Q6ZMI0 780 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 CCDC25Q86WR0 208 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 FAM193BQ96PV7 902 aaPredicted RBP12.22□□□□□ -0.45
LINC00654-201ENST00000379053 DNAI1Q9UI46 699 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 TNNQ9UQP3 1299 aa12.22□□□□□ -0.45
LINC00654-201ENST00000379053 IL13P35225 146 aa12.21□□□□□ -0.45
LINC00654-201ENST00000379053 CTSWP56202 376 aa12.21□□□□□ -0.45
LINC00654-201ENST00000379053 SKIV2LQ15477 1246 aaKnown RBP12.21□□□□□ -0.45
LINC00654-201ENST00000379053 FAM47AQ5JRC9 791 aa12.21□□□□□ -0.45
LINC00654-201ENST00000379053 SMC1BQ8NDV3 1235 aa12.21□□□□□ -0.45
LINC00654-201ENST00000379053 CALCOCO2Q13137 446 aa12.21□□□□□ -0.46
LINC00654-201ENST00000379053 HERC4Q5GLZ8 1057 aaPredicted RBP12.21□□□□□ -0.46
LINC00654-201ENST00000379053 RIOK1Q9BRS2 568 aaKnown RBP12.21□□□□□ -0.46
LINC00654-201ENST00000379053 ABCC2Q92887 1545 aa12.21□□□□□ -0.46
LINC00654-201ENST00000379053 IQCA1LA6NCM1 817 aa12.21□□□□□ -0.46
LINC00654-201ENST00000379053 PALM3A6NDB9 673 aaPredicted RBP12.21□□□□□ -0.46
LINC00654-201ENST00000379053 TTC38Q5R3I4 469 aa12.21□□□□□ -0.46
LINC00654-201ENST00000379053 CCT6BQ92526 530 aa12.21□□□□□ -0.46
LINC00654-201ENST00000379053 EXOC3O60645 756 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 GEN1Q17RS7 908 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 OTUD6AQ7L8S5 288 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 DEPTORQ8TB45 409 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 ARPP21Q9UBL0 812 aaPredicted RBP12.2□□□□□ -0.46
LINC00654-201ENST00000379053 CTNND2Q9UQB3 1225 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 CTAGE9A4FU28 777 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 CRCPO75575 148 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 STK10O94804 968 aaKnown RBP12.2□□□□□ -0.46
LINC00654-201ENST00000379053 ARID4AP29374 1257 aaPredicted RBP12.2□□□□□ -0.46
LINC00654-201ENST00000379053 ZBTB16Q05516 673 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 DIS3L2Q8IYB7 885 aaKnown RBP12.2□□□□□ -0.46
LINC00654-201ENST00000379053 IPO4Q8TEX9 1081 aaKnown RBP12.2□□□□□ -0.46
LINC00654-201ENST00000379053 MYL10Q9BUA6 226 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 CARD10Q9BWT7 1032 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 NSRP1Q9H0G5 558 aaKnown RBP12.2□□□□□ -0.46
LINC00654-201ENST00000379053 USP19O94966 1318 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 CALCRLQ16602 461 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 CAPZA3Q96KX2 299 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 MTIF3Q9H2K0 278 aaKnown RBP12.2□□□□□ -0.46
LINC00654-201ENST00000379053 ZEB2O60315 1214 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 SORBS3O60504 671 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 GAS7O60861 476 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 RPS6KB1P23443 525 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 PLEKHM2Q8IWE5 1019 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 MTRF1LQ9UGC7 380 aaKnown RBP12.2□□□□□ -0.46
LINC00654-201ENST00000379053 ELP1O95163 1332 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 CPA1P15085 419 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 VWA3BQ502W6 1294 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 MIER3Q7Z3K6 550 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 DPP9Q86TI2 863 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 KBTBD3Q8NAB2 608 aa12.2□□□□□ -0.46
LINC00654-201ENST00000379053 CSRNP2Q9H175 543 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms