RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SLC17A8Q8NDX2 589 aa21.99■■□□□ 1.11
PDLIM4-202ENST00000379018 FAM163AQ96GL9 167 aaPredicted RBP21.99■■□□□ 1.11
PDLIM4-202ENST00000379018 API5Q9BZZ5 524 aaKnown RBP21.99■■□□□ 1.11
PDLIM4-202ENST00000379018 RAI14Q9P0K7 980 aa21.99■■□□□ 1.11
PDLIM4-202ENST00000379018 ZMYND8Q9ULU4 1186 aaPredicted RBP21.99■■□□□ 1.11
PDLIM4-202ENST00000379018 HDAC5Q9UQL6 1122 aa21.99■■□□□ 1.11
PDLIM4-202ENST00000379018 GPR75-ASB3A0A0A6YYF3 556 aa21.98■■□□□ 1.11
PDLIM4-202ENST00000379018 SRGAP3O43295 1099 aa21.98■■□□□ 1.11
PDLIM4-202ENST00000379018 TRIM32Q13049 653 aa21.98■■□□□ 1.11
PDLIM4-202ENST00000379018 NECAB2Q7Z6G3 386 aa21.98■■□□□ 1.11
PDLIM4-202ENST00000379018 PROCA1Q8NCQ7 364 aaPredicted RBP21.98■■□□□ 1.11
PDLIM4-202ENST00000379018 ZNF280CQ8ND82 737 aa21.98■■□□□ 1.11
PDLIM4-202ENST00000379018 ZNF384Q8TF68 577 aa21.98■■□□□ 1.11
PDLIM4-202ENST00000379018 AKAP2Q9Y2D5 859 aa21.98■■□□□ 1.11
PDLIM4-202ENST00000379018 PDS5AQ29RF7 1337 aaKnown RBP21.98■■□□□ 1.11
PDLIM4-202ENST00000379018 LOC285556D6RIA3 1793 aa21.97■■□□□ 1.11
PDLIM4-202ENST00000379018 HMGCRP04035 888 aa21.97■■□□□ 1.11
PDLIM4-202ENST00000379018 CRISPLD2Q9H0B8 497 aa21.97■■□□□ 1.11
PDLIM4-202ENST00000379018 OSBPL5Q9H0X9 879 aaPredicted RBP21.97■■□□□ 1.11
PDLIM4-202ENST00000379018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.97■■□□□ 1.11
PDLIM4-202ENST00000379018 TBC1D12O60347 775 aa21.96■■□□□ 1.11
PDLIM4-202ENST00000379018 GSTO1P78417 241 aa21.96■■□□□ 1.11
PDLIM4-202ENST00000379018 RRP1BQ14684 758 aaKnown RBP21.96■■□□□ 1.11
PDLIM4-202ENST00000379018 TEX11Q8IYF3 940 aa21.96■■□□□ 1.11
PDLIM4-202ENST00000379018 ASCC2Q9H1I8 757 aaPredicted RBP21.96■■□□□ 1.11
PDLIM4-202ENST00000379018 HMG20BQ9P0W2 317 aa21.96■■□□□ 1.11
PDLIM4-202ENST00000379018 LDHCP07864 332 aa21.95■■□□□ 1.1
PDLIM4-202ENST00000379018 GCLCP48506 637 aaPredicted RBP21.95■■□□□ 1.1
PDLIM4-202ENST00000379018 PABPC4Q13310 644 aaKnown RBP eCLIP21.95■■□□□ 1.14e-7■■■■□ 24.4
PDLIM4-202ENST00000379018 SPATA5Q8NB90 893 aa21.95■■□□□ 1.1
PDLIM4-202ENST00000379018 USP17L5A8MUK1 530 aa21.94■■□□□ 1.1
PDLIM4-202ENST00000379018 PEX10O60683 326 aa21.94■■□□□ 1.1
PDLIM4-202ENST00000379018 SYN1P17600 705 aa21.94■■□□□ 1.1
PDLIM4-202ENST00000379018 CAP2P40123 477 aa21.94■■□□□ 1.1
PDLIM4-202ENST00000379018 NSUN4Q96CB9 384 aaKnown RBP21.94■■□□□ 1.1
PDLIM4-202ENST00000379018 DDX60LQ5H9U9 1706 aaKnown RBP21.94■■□□□ 1.1
PDLIM4-202ENST00000379018 A0A1W2PPC1 479 aa21.93■■□□□ 1.1
PDLIM4-202ENST00000379018 DLL1O00548 723 aa21.93■■□□□ 1.1
PDLIM4-202ENST00000379018 CYP2B6P20813 491 aa21.93■■□□□ 1.1
PDLIM4-202ENST00000379018 IRX3P78415 501 aaPredicted RBP21.93■■□□□ 1.1
PDLIM4-202ENST00000379018 MTMR2Q13614 643 aa21.93■■□□□ 1.1
PDLIM4-202ENST00000379018 NOL10Q9BSC4 688 aaKnown RBP21.93■■□□□ 1.1
PDLIM4-202ENST00000379018 HMX1Q9NP08 348 aaPredicted RBP21.93■■□□□ 1.1
PDLIM4-202ENST00000379018 LRP2BPQ9P2M1 347 aa21.93■■□□□ 1.1
PDLIM4-202ENST00000379018 SH3RF3Q8TEJ3 882 aaPredicted RBP21.92■■□□□ 1.1
PDLIM4-202ENST00000379018 AS3MTQ9HBK9 375 aa21.92■■□□□ 1.1
PDLIM4-202ENST00000379018 RPTORQ8N122 1335 aa21.91■■□□□ 1.1
PDLIM4-202ENST00000379018 GNAI3P08754 354 aa21.91■■□□□ 1.1
PDLIM4-202ENST00000379018 TRIB2Q92519 343 aa21.91■■□□□ 1.1
PDLIM4-202ENST00000379018 NBPF3Q9H094 633 aa21.91■■□□□ 1.1
PDLIM4-202ENST00000379018 AATFQ9NY61 560 aaKnown RBP eCLIP21.91■■□□□ 1.1
PDLIM4-202ENST00000379018 TMOD4Q9NZQ9 345 aa21.91■■□□□ 1.1
PDLIM4-202ENST00000379018 GJD2Q9UKL4 321 aa21.91■■□□□ 1.1
PDLIM4-202ENST00000379018 ZBTB22O15209 634 aa21.9■■□□□ 1.1
PDLIM4-202ENST00000379018 NPM3O75607 178 aaKnown RBP21.9■■□□□ 1.1
PDLIM4-202ENST00000379018 CAPN2P17655 700 aa21.9■■□□□ 1.1
PDLIM4-202ENST00000379018 MCAMP43121 646 aa21.9■■□□□ 1.1
PDLIM4-202ENST00000379018 TRIM34Q9BYJ4 488 aa21.9■■□□□ 1.1
PDLIM4-202ENST00000379018 TBC1D2Q9BYX2 928 aa21.9■■□□□ 1.1
PDLIM4-202ENST00000379018 C11orf49Q9H6J7 331 aa21.9■■□□□ 1.1
PDLIM4-202ENST00000379018 SNRKQ9NRH2 765 aa21.9■■□□□ 1.1
PDLIM4-202ENST00000379018 COL2A1P02458 1487 aaPredicted RBP21.9■■□□□ 1.1
PDLIM4-202ENST00000379018 PLXNB2O15031 1838 aa21.9■■□□□ 1.1
PDLIM4-202ENST00000379018 LAMA3Q16787 3333 aa21.89■■□□□ 1.1
PDLIM4-202ENST00000379018 GDF11O95390 407 aa21.89■■□□□ 1.09
PDLIM4-202ENST00000379018 SHROOM1Q2M3G4 852 aaPredicted RBP21.89■■□□□ 1.09
PDLIM4-202ENST00000379018 MAPKAPK5Q8IW41 473 aa21.89■■□□□ 1.09
PDLIM4-202ENST00000379018 ANKLE1Q8NAG6 615 aa21.89■■□□□ 1.09
PDLIM4-202ENST00000379018 HERC5Q9UII4 1024 aaKnown RBP21.89■■□□□ 1.09
PDLIM4-202ENST00000379018 SIPA1L1O43166 1804 aa21.88■■□□□ 1.09
PDLIM4-202ENST00000379018 PRKAR2AP13861 404 aaKnown RBP21.88■■□□□ 1.09
PDLIM4-202ENST00000379018 ARID4AP29374 1257 aaPredicted RBP21.88■■□□□ 1.09
PDLIM4-202ENST00000379018 G3BP1Q13283 466 aaKnown RBP eCLIP21.88■■□□□ 1.09
PDLIM4-202ENST00000379018 CCAR1Q8IX12 1150 aaKnown RBP21.88■■□□□ 1.09
PDLIM4-202ENST00000379018 CRACR2BQ8N4Y2 399 aaPredicted RBP21.88■■□□□ 1.09
PDLIM4-202ENST00000379018 P2RX7Q99572 595 aaKnown RBP21.88■■□□□ 1.09
PDLIM4-202ENST00000379018 GDF15Q99988 308 aa21.88■■□□□ 1.09
PDLIM4-202ENST00000379018 PI4KBQ9UBF8 816 aa21.88■■□□□ 1.09
PDLIM4-202ENST00000379018 COL6A3P12111 3177 aa21.87■■□□□ 1.09
PDLIM4-202ENST00000379018 MAP4K4O95819 1239 aaPredicted RBP21.87■■□□□ 1.09
PDLIM4-202ENST00000379018 CT47B1P0C2W7 299 aaPredicted RBP21.87■■□□□ 1.09
PDLIM4-202ENST00000379018 MAGEA10P43363 369 aaPredicted RBP21.87■■□□□ 1.09
PDLIM4-202ENST00000379018 SH3D19Q5HYK7 790 aa21.87■■□□□ 1.09
PDLIM4-202ENST00000379018 NAA16Q6N069 864 aaPredicted RBP21.87■■□□□ 1.09
PDLIM4-202ENST00000379018 Q7L0L9 218 aa21.87■■□□□ 1.09
PDLIM4-202ENST00000379018 TGFBRAP1Q8WUH2 860 aa21.87■■□□□ 1.09
PDLIM4-202ENST00000379018 PAGR1Q9BTK6 254 aa21.87■■□□□ 1.09
PDLIM4-202ENST00000379018 TXNRD2Q9NNW7 524 aa21.87■■□□□ 1.09
PDLIM4-202ENST00000379018 MNX1P50219 401 aaPredicted RBP21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 RARSP54136 660 aaKnown RBP21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 BACE1P56817 501 aa21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 HERVK_113P62684 666 aa21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 JAG1P78504 1218 aa21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 PDE3AQ14432 1141 aa21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 TTC39AQ5SRH9 613 aa21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 TRMT2AQ8IZ69 625 aaKnown RBP21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 DEFB123Q8N688 67 aa21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 NUDT12Q9BQG2 462 aa21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 CWC22Q9HCG8 908 aaKnown RBP21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 MORF4L1Q9UBU8 362 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms