RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 ARHGAP39Q9C0H5 1083 aa23.11■■□□□ 1.29
TMEM88B-201ENST00000378821 DHX36Q9H2U1 1008 aaKnown RBP23.11■■□□□ 1.29
TMEM88B-201ENST00000378821 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.11■■□□□ 1.29
TMEM88B-201ENST00000378821 AATFQ9NY61 560 aaKnown RBP eCLIP23.11■■□□□ 1.29
TMEM88B-201ENST00000378821 HERC5Q9UII4 1024 aaKnown RBP23.11■■□□□ 1.29
TMEM88B-201ENST00000378821 EXOC6BQ9Y2D4 811 aa23.11■■□□□ 1.29
TMEM88B-201ENST00000378821 ATAD5Q96QE3 1844 aa23.1■■□□□ 1.29
TMEM88B-201ENST00000378821 PRMT2P55345 433 aa23.1■■□□□ 1.29
TMEM88B-201ENST00000378821 PARK7Q99497 189 aaKnown RBP23.1■■□□□ 1.29
TMEM88B-201ENST00000378821 PI4KBQ9UBF8 816 aa23.1■■□□□ 1.29
TMEM88B-201ENST00000378821 BCRP11274 1271 aa23.09■■□□□ 1.29
TMEM88B-201ENST00000378821 CTGFP29279 349 aa23.09■■□□□ 1.29
TMEM88B-201ENST00000378821 CAP2P40123 477 aa23.09■■□□□ 1.29
TMEM88B-201ENST00000378821 ZNF333Q96JL9 665 aa23.09■■□□□ 1.29
TMEM88B-201ENST00000378821 TBC1D2Q9BYX2 928 aa23.09■■□□□ 1.29
TMEM88B-201ENST00000378821 CPA4Q9UI42 421 aa23.09■■□□□ 1.29
TMEM88B-201ENST00000378821 PTCH2Q9Y6C5 1203 aa23.09■■□□□ 1.29
TMEM88B-201ENST00000378821 FAM196BA6NMK8 535 aa23.08■■□□□ 1.29
TMEM88B-201ENST00000378821 RRP1BQ14684 758 aaKnown RBP23.08■■□□□ 1.29
TMEM88B-201ENST00000378821 RHPN1Q8TCX5 695 aa23.08■■□□□ 1.29
TMEM88B-201ENST00000378821 FLT1P17948 1338 aa23.08■■□□□ 1.28
TMEM88B-201ENST00000378821 PDE4DIPQ5VU43 2346 aa23.07■■□□□ 1.28
TMEM88B-201ENST00000378821 POTEFA5A3E0 1075 aa23.07■■□□□ 1.28
TMEM88B-201ENST00000378821 AACSQ86V21 672 aa23.07■■□□□ 1.28
TMEM88B-201ENST00000378821 CERS3Q8IU89 383 aa23.07■■□□□ 1.28
TMEM88B-201ENST00000378821 TGFBRAP1Q8WUH2 860 aa23.07■■□□□ 1.28
TMEM88B-201ENST00000378821 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
TMEM88B-201ENST00000378821 LOC285556D6RIA3 1793 aa23.06■■□□□ 1.28
TMEM88B-201ENST00000378821 HMMRO75330 724 aa23.06■■□□□ 1.28
TMEM88B-201ENST00000378821 NBPF11Q86T75 865 aa23.06■■□□□ 1.28
TMEM88B-201ENST00000378821 FOXP4Q8IVH2 680 aaPredicted RBP23.06■■□□□ 1.28
TMEM88B-201ENST00000378821 TRIM47Q96LD4 638 aa23.06■■□□□ 1.28
TMEM88B-201ENST00000378821 MGAMO43451 1857 aa23.06■■□□□ 1.28
TMEM88B-201ENST00000378821 TRIM75PA6NK02 468 aa23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 CYP2C8P10632 490 aa23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 CYP7A1P22680 504 aa23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 PSMC4P43686 418 aa23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 SLC9C1Q4G0N8 1177 aa23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 PROCA1Q8NCQ7 364 aaPredicted RBP23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 KIF1BPQ96EK5 621 aa23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 CRBNQ96SW2 442 aa23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 ANTXR1Q9H6X2 564 aa23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 SRRDQ9UH36 339 aa23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 AGTPBP1Q9UPW5 1226 aa23.05■■□□□ 1.28
TMEM88B-201ENST00000378821 CCDC84Q86UT8 332 aaPredicted RBP23.04■■□□□ 1.28
TMEM88B-201ENST00000378821 ZNF280CQ8ND82 737 aa23.04■■□□□ 1.28
TMEM88B-201ENST00000378821 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.04■■□□□ 1.28
TMEM88B-201ENST00000378821 DNAJC18Q9H819 358 aa23.04■■□□□ 1.28
TMEM88B-201ENST00000378821 IL1RAPL2Q9NP60 686 aa23.04■■□□□ 1.28
TMEM88B-201ENST00000378821 RAB11FIP3O75154 756 aa23.03■■□□□ 1.28
TMEM88B-201ENST00000378821 IDH1O75874 414 aaKnown RBP23.03■■□□□ 1.28
TMEM88B-201ENST00000378821 SH3D19Q5HYK7 790 aa23.03■■□□□ 1.28
TMEM88B-201ENST00000378821 GADL1Q6ZQY3 521 aa23.03■■□□□ 1.28
TMEM88B-201ENST00000378821 MAPKAPK5Q8IW41 473 aa23.03■■□□□ 1.28
TMEM88B-201ENST00000378821 WDR18Q9BV38 432 aa23.03■■□□□ 1.28
TMEM88B-201ENST00000378821 GINM1Q9NU53 330 aa23.03■■□□□ 1.28
TMEM88B-201ENST00000378821 NDUFB9Q9Y6M9 179 aa23.03■■□□□ 1.28
TMEM88B-201ENST00000378821 KIAA0100Q14667 2235 aaKnown RBP23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 USP17L5A8MUK1 530 aa23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 OSBPP22059 807 aa23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 HOXD10P28358 340 aa23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 DYNLL1P63167 89 aaKnown RBP23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 MAP3K12Q12852 859 aa23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 SPP2Q13103 211 aa23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 CLASRPQ8N2M8 674 aaKnown RBP23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 MAGEB6Q8N7X4 407 aa23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 PALD1Q9ULE6 856 aa23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 MYH1P12882 1939 aa23.02■■□□□ 1.28
TMEM88B-201ENST00000378821 TTF1Q15361 905 aaPredicted RBP23.01■■□□□ 1.27
TMEM88B-201ENST00000378821 BRCA2P51587 3418 aa23.01■■□□□ 1.27
TMEM88B-201ENST00000378821 ASNSP08243 561 aa23■■□□□ 1.27
TMEM88B-201ENST00000378821 JAG1P78504 1218 aa23■■□□□ 1.27
TMEM88B-201ENST00000378821 TREML2Q5T2D2 321 aa23■■□□□ 1.27
TMEM88B-201ENST00000378821 APBB1O00213 710 aa22.99■■□□□ 1.27
TMEM88B-201ENST00000378821 FMNL1O95466 1100 aaPredicted RBP22.99■■□□□ 1.27
TMEM88B-201ENST00000378821 EN2P19622 333 aaPredicted RBP22.99■■□□□ 1.27
TMEM88B-201ENST00000378821 FCGRTP55899 365 aa22.99■■□□□ 1.27
TMEM88B-201ENST00000378821 PRPF38BQ5VTL8 546 aaKnown RBP22.99■■□□□ 1.27
TMEM88B-201ENST00000378821 RIOK1Q9BRS2 568 aaKnown RBP22.99■■□□□ 1.27
TMEM88B-201ENST00000378821 TMEM106CQ9BVX2 250 aa22.99■■□□□ 1.27
TMEM88B-201ENST00000378821 AS3MTQ9HBK9 375 aa22.99■■□□□ 1.27
TMEM88B-201ENST00000378821 MKI67P46013 3256 aaKnown RBP22.99■■□□□ 1.27
TMEM88B-201ENST00000378821 MIGA1Q8NAN2 632 aa22.98■■□□□ 1.27
TMEM88B-201ENST00000378821 SH3TC2Q8TF17 1288 aa22.98■■□□□ 1.27
TMEM88B-201ENST00000378821 EHD4Q9H223 541 aa22.98■■□□□ 1.27
TMEM88B-201ENST00000378821 PNMA3Q9UL41 463 aa22.98■■□□□ 1.27
TMEM88B-201ENST00000378821 SUPT16HQ9Y5B9 1047 aaKnown RBP22.98■■□□□ 1.27
TMEM88B-201ENST00000378821 PCDHB15Q9Y5E8 787 aa22.98■■□□□ 1.27
TMEM88B-201ENST00000378821 DDX60LQ5H9U9 1706 aaKnown RBP22.97■■□□□ 1.27
TMEM88B-201ENST00000378821 HLA-DOAP06340 250 aa22.97■■□□□ 1.27
TMEM88B-201ENST00000378821 HMGCS2P54868 508 aa22.97■■□□□ 1.27
TMEM88B-201ENST00000378821 TATDN1Q6P1N9 297 aa22.97■■□□□ 1.27
TMEM88B-201ENST00000378821 CRACR2BQ8N4Y2 399 aaPredicted RBP22.97■■□□□ 1.27
TMEM88B-201ENST00000378821 SAP30BPQ9UHR5 308 aaKnown RBP22.97■■□□□ 1.27
TMEM88B-201ENST00000378821 MYPNQ86TC9 1320 aa22.97■■□□□ 1.27
TMEM88B-201ENST00000378821 IFIT2P09913 472 aaKnown RBP22.96■■□□□ 1.27
TMEM88B-201ENST00000378821 BACE1P56817 501 aa22.96■■□□□ 1.27
TMEM88B-201ENST00000378821 SMCR8Q8TEV9 937 aaPredicted RBP22.96■■□□□ 1.27
TMEM88B-201ENST00000378821 TCRBV5S4A2TA0A5A2 114 aa22.95■■□□□ 1.26
TMEM88B-201ENST00000378821 C19orf81C9J6K1 198 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms