RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ERICH2A1L162 156 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 F8W031 263 aaPredicted RBP20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 H3BQV1 296 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 FOSBP53539 338 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 RESTQ13127 1097 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 IFFO2Q5TF58 517 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 MAPKAPK5Q8IW41 473 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 ADAMTSL1Q8N6G6 1762 aa20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 GOLGA8AA7E2F4 631 aa20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 SLC3A2P08195 630 aaKnown RBP20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 KCNA3P22001 575 aa20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 NTRK3Q16288 839 aa20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 TEX11Q8IYF3 940 aa20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 TMTC2Q8N394 836 aa20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 ENAHQ8N8S7 591 aaPredicted RBP20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 ZSCAN10Q96SZ4 725 aaPredicted RBP20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 ORC3Q9UBD5 711 aaPredicted RBP20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 ROBO3Q96MS0 1386 aa20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 C21orf2O43822 256 aa20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 PLCG2P16885 1265 aa20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 CC2D2BQ6DHV5 1058 aa20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 TTF2Q9UNY4 1162 aaKnown RBP20.3■□□□□ 0.84
THUMPD2-201ENST00000378727 ECE2O60344 883 aa20.29■□□□□ 0.84
THUMPD2-201ENST00000378727 GADD45BO75293 160 aaPredicted RBP20.29■□□□□ 0.84
THUMPD2-201ENST00000378727 DPEP1P16444 411 aa20.29■□□□□ 0.84
THUMPD2-201ENST00000378727 ECM29Q5VYK3 1845 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 FIBPO43427 364 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 NCLP19338 710 aaKnown RBP20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 PDE4BQ07343 736 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 AOC3Q16853 763 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 TTLL6Q8N841 843 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 DYNLL2Q96FJ2 89 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 SAP30BPQ9UHR5 308 aaKnown RBP20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 FLT1P17948 1338 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 MYH1P12882 1939 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 PLCD1P51178 756 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 KIAA2012Q0VF49 1180 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 FAM47AQ5JRC9 791 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 SYNE3Q6ZMZ3 975 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 ZNF654Q8IZM8 581 aa20.28■□□□□ 0.84
THUMPD2-201ENST00000378727 MYH15Q9Y2K3 1946 aa20.27■□□□□ 0.84
THUMPD2-201ENST00000378727 ZBTB7AO95365 584 aa20.27■□□□□ 0.84
THUMPD2-201ENST00000378727 SCNN1DP51172 638 aa20.27■□□□□ 0.84
THUMPD2-201ENST00000378727 IQCA1Q86XH1 822 aa20.27■□□□□ 0.84
THUMPD2-201ENST00000378727 GOLGB1Q14789 3259 aaKnown RBP20.27■□□□□ 0.83
THUMPD2-201ENST00000378727 NMT2O60551 498 aa20.26■□□□□ 0.83
THUMPD2-201ENST00000378727 RCAN1P53805 252 aa20.26■□□□□ 0.83
THUMPD2-201ENST00000378727 GUCY1B3Q02153 619 aa20.26■□□□□ 0.83
THUMPD2-201ENST00000378727 DACT2Q5SW24 774 aa20.26■□□□□ 0.83
THUMPD2-201ENST00000378727 STRIP1Q5VSL9 837 aa20.26■□□□□ 0.83
THUMPD2-201ENST00000378727 PHKBQ93100 1093 aa20.26■□□□□ 0.83
THUMPD2-201ENST00000378727 CDKL5O76039 1030 aa20.26■□□□□ 0.83
THUMPD2-201ENST00000378727 ZSCAN16Q9H4T2 348 aaPredicted RBP20.26■□□□□ 0.83
THUMPD2-201ENST00000378727 POLR3DP05423 398 aaPredicted RBP20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 RTN1Q16799 776 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 CAVIN1Q6NZI2 390 aaKnown RBP20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 AMOTL1Q8IY63 956 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 MBD3O95983 291 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 FKBP1AP62942 108 aaKnown RBP20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 KRT85P78386 507 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 IFIT1BQ5T764 474 aaKnown RBP20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 CPLX2Q6PUV4 134 aaKnown RBP20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 HHIPL2Q6UWX4 724 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 FANCBQ8NB91 859 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 SLC44A5Q8NCS7 719 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 SUPT20HQ8NEM7 779 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 C8orf76Q96K31 380 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 AIFM3Q96NN9 605 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 GJB4Q9NTQ9 266 aa20.25■□□□□ 0.83
THUMPD2-201ENST00000378727 FBXO18Q8NFZ0 1043 aa20.24■□□□□ 0.83
THUMPD2-201ENST00000378727 NUP133Q8WUM0 1156 aa20.24■□□□□ 0.83
THUMPD2-201ENST00000378727 RBM27Q9P2N5 1060 aaKnown RBP20.24■□□□□ 0.83
THUMPD2-201ENST00000378727 ATF5Q9Y2D1 282 aaPredicted RBP20.24■□□□□ 0.83
THUMPD2-201ENST00000378727 TSPY2A6NKD2 308 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 IFNAR1P17181 557 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 IARSP41252 1262 aaKnown RBP20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 CCDC93Q567U6 631 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 TTC6Q86TZ1 520 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 TEKT1Q969V4 418 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 TFIP11Q9UBB9 837 aaKnown RBP20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 USP17L3A6NCW0 530 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 USP17L4A6NCW7 530 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 YDJCA8MPS7 323 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 UBE2Q2LH0YL09 131 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 PPIP5K2O43314 1243 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 WDHD1O75717 1129 aaPredicted RBP20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 GRIPAP1Q4V328 841 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 APOBEC3HQ6NTF7 200 aaKnown RBP20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 USP17L1Q7RTZ2 530 aa20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 ILDR1Q86SU0 546 aaPredicted RBP20.23■□□□□ 0.83
THUMPD2-201ENST00000378727 FMNL1O95466 1100 aaPredicted RBP20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 TFAP4Q01664 338 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 TROAPQ12815 778 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 RCSD1Q6JBY9 416 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 NBPF11Q86T75 865 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 KIAA0825Q8IV33 1275 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 ALG1Q9BT22 464 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 DDX4Q9NQI0 724 aaKnown RBP20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 IL17RBQ9NRM6 502 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms