RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 NRAPQ86VF7 1730 aa22.49■■□□□ 1.19
SHROOM1-202ENST00000378676 FOXN1O15353 648 aa22.49■■□□□ 1.19
SHROOM1-202ENST00000378676 GRIN1Q05586 938 aa22.49■■□□□ 1.19
SHROOM1-202ENST00000378676 SYCP1Q15431 976 aa22.49■■□□□ 1.19
SHROOM1-202ENST00000378676 DIS3L2Q8IYB7 885 aaKnown RBP22.49■■□□□ 1.19
SHROOM1-202ENST00000378676 CCDC150Q8NCX0 1101 aa22.49■■□□□ 1.19
SHROOM1-202ENST00000378676 DPF2Q92785 391 aa22.49■■□□□ 1.19
SHROOM1-202ENST00000378676 ACSBG1Q96GR2 724 aa22.49■■□□□ 1.19
SHROOM1-202ENST00000378676 BCL11BQ9C0K0 894 aaPredicted RBP22.49■■□□□ 1.19
SHROOM1-202ENST00000378676 SCN7AQ01118 1682 aa22.49■■□□□ 1.19
SHROOM1-202ENST00000378676 CHRNDQ07001 517 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 CCDC152Q4G0S7 254 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 E4F1Q66K89 784 aaPredicted RBP22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 KRBA2Q6ZNG9 492 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 FOXP4Q8IVH2 680 aaPredicted RBP22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 CCDC82Q8N4S0 544 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 KCNH3Q9ULD8 1083 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 COL1A1P02452 1464 aaPredicted RBP22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 SMIM22K7EJ46 135 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 GNAT2P19087 354 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 ATP6V1AP38606 617 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 IGHMBP2P38935 993 aaKnown RBP22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 ITPK1Q13572 414 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 NACAP1Q9BZK3 213 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 PODXL2Q9NZ53 605 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 RTL9Q8NET4 1388 aa22.48■■□□□ 1.19
SHROOM1-202ENST00000378676 KRI1Q8N9T8 703 aaKnown RBP22.47■■□□□ 1.19
SHROOM1-202ENST00000378676 WASF1Q92558 559 aa22.47■■□□□ 1.19
SHROOM1-202ENST00000378676 LRP2BPQ9P2M1 347 aa22.47■■□□□ 1.19
SHROOM1-202ENST00000378676 NIP7Q9Y221 180 aaKnown RBP eCLIP22.47■■□□□ 1.19
SHROOM1-202ENST00000378676 COL5A3P25940 1745 aaPredicted RBP22.47■■□□□ 1.19
SHROOM1-202ENST00000378676 DLEC1Q9Y238 1755 aa22.47■■□□□ 1.19
SHROOM1-202ENST00000378676 DUOX1Q9NRD9 1551 aa22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 SFPQP23246 707 aaKnown RBP eCLIP22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 MYL5Q02045 173 aa22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 CNNM3Q8NE01 707 aa22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 SDR42E1Q8WUS8 393 aa22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 BMP6P22004 513 aa22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 PPARAQ07869 468 aa22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 NR5A1Q13285 461 aa22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 PARP10Q53GL7 1025 aa22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 FBXO2Q9UK22 296 aaPredicted RBP22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 PCDHA5Q9Y5H7 936 aa22.46■■□□□ 1.19
SHROOM1-202ENST00000378676 MYH13Q9UKX3 1938 aa22.45■■□□□ 1.19
SHROOM1-202ENST00000378676 UBAP1LF5GYI3 381 aa22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 CYP7A1P22680 504 aa22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 CBX1P83916 185 aa22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 PDE4BQ07343 736 aa22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 SART3Q15020 963 aaKnown RBP22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 TRIM22Q8IYM9 498 aa22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 ZNF654Q8IZM8 581 aa22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 PPP1R13BQ96KQ4 1090 aa22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 PRDM10Q9NQV6 1147 aa22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 WTIPA6NIX2 430 aaPredicted RBP22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 CRACR2BQ8N4Y2 399 aaPredicted RBP22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 NUP133Q8WUM0 1156 aa22.45■■□□□ 1.18
SHROOM1-202ENST00000378676 LOC102724428A0A0B4J2F2 783 aa22.44■■□□□ 1.18
SHROOM1-202ENST00000378676 SIK1P57059 783 aa22.44■■□□□ 1.18
SHROOM1-202ENST00000378676 SAFBQ15424 915 aaKnown RBP eCLIP22.44■■□□□ 1.18
SHROOM1-202ENST00000378676 OXER1Q8TDS5 423 aa22.44■■□□□ 1.18
SHROOM1-202ENST00000378676 SHISA4Q96DD7 197 aa22.44■■□□□ 1.18
SHROOM1-202ENST00000378676 PCDHB6Q9Y5E3 794 aa22.44■■□□□ 1.18
SHROOM1-202ENST00000378676 DEXIO95424 95 aa22.43■■□□□ 1.18
SHROOM1-202ENST00000378676 PRR29P0C7W0 189 aa22.43■■□□□ 1.18
SHROOM1-202ENST00000378676 MDM2Q00987 491 aaPredicted RBP22.43■■□□□ 1.18
SHROOM1-202ENST00000378676 PTPN21Q16825 1174 aa22.43■■□□□ 1.18
SHROOM1-202ENST00000378676 ZNF215Q9UL58 517 aaPredicted RBP22.43■■□□□ 1.18
SHROOM1-202ENST00000378676 ERICH2A1L162 156 aa22.43■■□□□ 1.18
SHROOM1-202ENST00000378676 FOXP1Q9H334 677 aaPredicted RBP22.43■■□□□ 1.18
SHROOM1-202ENST00000378676 SPDYE4A6NLX3 237 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 MINDY4BA8MYZ0 360 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 TMEM232C9JQI7 657 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 GYG1P46976 350 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 UBASH3AP57075 661 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 FANCBQ8NB91 859 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 ABCF2Q9UG63 623 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 ZNF804BA4D1E1 1349 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 TNKSO95271 1327 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 PTPREP23469 700 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 SEC23AQ15436 765 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 OLFM4Q6UX06 510 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 FANCLQ9NW38 375 aa22.42■■□□□ 1.18
SHROOM1-202ENST00000378676 SERPINC1P01008 464 aa22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 C3orf67Q6ZVT6 689 aa22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 RNF41Q9H4P4 317 aaPredicted RBP22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 V9GYY5 206 aaPredicted RBP22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 LAMB1P07942 1786 aa22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 DDB1Q16531 1140 aa22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 RILPL1Q5EBL4 403 aa22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 KIF18AQ8NI77 898 aa22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 UBAC1Q9BSL1 405 aa22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 MTA3Q9BTC8 594 aa22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 SERTAD1Q9UHV2 236 aa22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 MAN1B1Q9UKM7 699 aa22.41■■□□□ 1.18
SHROOM1-202ENST00000378676 PSDA5PKW4 1024 aaPredicted RBP22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 FAM205CA6NFA0 338 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 ADAMTS2O95450 1211 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 KCNJ6P48051 423 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 GOLGA8FQ08AF8 430 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms