RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 MYSM1Q5VVJ2 828 aa16.91■□□□□ 0.3
NPHP4-201ENST00000378156 BAG1Q99933 345 aaPredicted RBP16.91■□□□□ 0.3
NPHP4-201ENST00000378156 PNPLA6Q8IY17 1366 aa16.91■□□□□ 0.3
NPHP4-201ENST00000378156 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
NPHP4-201ENST00000378156 CTAGE15A4D2H0 777 aa16.91■□□□□ 0.3
NPHP4-201ENST00000378156 CTAGE8P0CG41 777 aa16.91■□□□□ 0.3
NPHP4-201ENST00000378156 PRPF4BQ13523 1007 aaKnown RBP16.91■□□□□ 0.3
NPHP4-201ENST00000378156 HS2ST1Q7LGA3 356 aa16.91■□□□□ 0.3
NPHP4-201ENST00000378156 CTAGE6Q86UF2 777 aa16.91■□□□□ 0.3
NPHP4-201ENST00000378156 CTAGE4Q8IX94 777 aa16.91■□□□□ 0.3
NPHP4-201ENST00000378156 NAP1L4Q99733 375 aaKnown RBP16.91■□□□□ 0.3
NPHP4-201ENST00000378156 TERF1P54274 439 aa16.91■□□□□ 0.3
NPHP4-201ENST00000378156 BCCIPQ9P287 314 aaKnown RBP eCLIP16.91■□□□□ 0.3
NPHP4-201ENST00000378156 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
NPHP4-201ENST00000378156 KCNJ14Q9UNX9 436 aa16.91■□□□□ 0.3
NPHP4-201ENST00000378156 PIK3AP1Q6ZUJ8 805 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 CEP112Q8N8E3 955 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 TBC1D5Q92609 795 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 ZNF274Q96GC6 653 aaPredicted RBP16.9■□□□□ 0.3
NPHP4-201ENST00000378156 DRC1Q96MC2 740 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 CYP21A2P08686 494 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 POLA2Q14181 598 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 MAPKAPK5Q8IW41 473 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 SCRN1Q12765 414 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 IFI16Q16666 785 aaKnown RBP16.9■□□□□ 0.3
NPHP4-201ENST00000378156 LARGE2Q8N3Y3 721 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 TSPOAP1O95153 1857 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 CUTAO60888 179 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 FAM13AO94988 1023 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 PLCD1P51178 756 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 NLRP12P59046 1061 aa16.9■□□□□ 0.3
NPHP4-201ENST00000378156 ALDH1B1P30837 517 aa16.89■□□□□ 0.3
NPHP4-201ENST00000378156 IL6STP40189 918 aaPredicted RBP16.89■□□□□ 0.3
NPHP4-201ENST00000378156 PDE6AP16499 860 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 CCT6AP40227 531 aaKnown RBP16.89■□□□□ 0.29
NPHP4-201ENST00000378156 UBXN1Q04323 297 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 TCHPQ9BT92 498 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 HSF2BPO75031 334 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 ADD1P35611 737 aaKnown RBP16.89■□□□□ 0.29
NPHP4-201ENST00000378156 GYG1P46976 350 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 ZNF569Q5MCW4 686 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 PUS3Q9BZE2 481 aaKnown RBP16.89■□□□□ 0.29
NPHP4-201ENST00000378156 GOPCQ9HD26 462 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 CTAGE9A4FU28 777 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 FGAP02671 866 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 TUBBP07437 444 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 TFAP4Q01664 338 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 ADALQ6DHV7 355 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 TGFBRAP1Q8WUH2 860 aa16.89■□□□□ 0.29
NPHP4-201ENST00000378156 USP17L12C9JPN9 530 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 USP17L21D6R901 530 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 STAMBPO95630 424 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 GJA3Q9Y6H8 435 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 hCG_1642624A0A1W2PR95 340 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 SASH1O94885 1247 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 CTNNA2P26232 953 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 GREM2Q9H772 168 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 ARHGEF10LQ9HCE6 1279 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 ADCY9O60503 1353 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 PDE8BO95263 885 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 MAATS1Q7Z4T9 603 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 GOLGA1Q92805 767 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 GUCA1BQ9UMX6 200 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 CRKLP46109 303 aaKnown RBP16.88■□□□□ 0.29
NPHP4-201ENST00000378156 BCAMP50895 628 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 SV2BQ7L1I2 683 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 ERO1AQ96HE7 468 aa16.88■□□□□ 0.29
NPHP4-201ENST00000378156 XPO4Q9C0E2 1151 aaKnown RBP16.88■□□□□ 0.29
NPHP4-201ENST00000378156 FCHSD1Q86WN1 690 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 GLT8D2Q9H1C3 349 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 NFE2L3Q9Y4A8 694 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 AKR1B15C9JRZ8 316 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-201ENST00000378156 U2AF2P26368 475 aaKnown RBP eCLIP16.87■□□□□ 0.29
NPHP4-201ENST00000378156 SLC1A4P43007 532 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 MFSD14BQ5SR56 506 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 BBXQ8WY36 941 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-201ENST00000378156 FERMT2Q96AC1 680 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 KIF2CQ99661 725 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 KIAA1468Q9P260 1216 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 LRRC7Q96NW7 1537 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 PHACTR2O75167 634 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 PDIA3P30101 505 aaKnown RBP16.87■□□□□ 0.29
NPHP4-201ENST00000378156 PPARAQ07869 468 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 HOOK3Q86VS8 718 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 SUPT20HQ8NEM7 779 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 MAPK8IP1Q9UQF2 711 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 ADGRB3O60242 1522 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 GTF2IP78347 998 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 TTC38Q5R3I4 469 aa16.87■□□□□ 0.29
NPHP4-201ENST00000378156 SMAP1Q8IYB5 467 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-201ENST00000378156 IGSF22Q8N9C0 903 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 CCDC42Q96M95 316 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 A2ML1A8K2U0 1454 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 OPA1O60313 960 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 PFKFB1P16118 471 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 IFNL3Q8IZI9 196 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 USPL1Q5W0Q7 1092 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 VPS16Q9H269 839 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms