RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 PDGFDQ9GZP0 370 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-203ENST00000378037 BRMS1Q9HCU9 246 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 GUCY1A2P33402 732 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 SOGA3Q5TF21 947 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 NYXQ9GZU5 481 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 HOMER2Q9NSB8 354 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 GDF11O95390 407 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 TNNI2P48788 182 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 PDE4BQ07343 736 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 GOLGA8FQ08AF8 430 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 GOLGA8DPQ0D2H9 430 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 PRAMEF18Q5VWM3 479 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 ADGRA1Q86SQ6 560 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 FEZ1Q99689 392 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 FAM205CA6NFA0 338 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 BAG3O95817 575 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 AKNAD1Q5T1N1 836 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 FCHSD1Q86WN1 690 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 LRRC4BQ9NT99 713 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 CCDC194A0A1B0GVG4 234 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 SPTLC2O15270 562 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 PLEKHA8P1O95397 391 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 UBXN2AP68543 259 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 HMGN5P82970 282 aaKnown RBP9.35□□□□□ -0.91
CKAP2-203ENST00000378037 LETM2Q2VYF4 491 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 LRSAM1Q6UWE0 723 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 ZNF804AQ7Z570 1209 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.35□□□□□ -0.91
CKAP2-203ENST00000378037 KCNQ5Q9NR82 932 aa9.35□□□□□ -0.91
CKAP2-203ENST00000378037 ZBTB12Q9Y330 459 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-203ENST00000378037 GOLGA6L6A8MZA4 724 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 MYCNP04198 464 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-203ENST00000378037 CDC27P30260 824 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 BTDP43251 543 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 TYRO3Q06418 890 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 RABL6Q3YEC7 729 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-203ENST00000378037 USP17L2Q6R6M4 530 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 NSUN7Q8NE18 718 aaKnown RBP9.34□□□□□ -0.91
CKAP2-203ENST00000378037 FAM84BQ96KN1 310 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-203ENST00000378037 BLZF1Q9H2G9 400 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 MROH5Q6ZUA9 1318 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 COL5A2P05997 1499 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-203ENST00000378037 CDKL5O76039 1030 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 SYKP43405 635 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 GRIK5Q16478 980 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 CCDC186Q7Z3E2 898 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 SMYD4Q8IYR2 804 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-203ENST00000378037 CPXCR1Q8N123 301 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 NKX2-3Q8TAU0 364 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 SH3RF3Q8TEJ3 882 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-203ENST00000378037 STRBPQ96SI9 672 aaKnown RBP9.34□□□□□ -0.91
CKAP2-203ENST00000378037 ZBTB21Q9ULJ3 1066 aa9.34□□□□□ -0.91
CKAP2-203ENST00000378037 PPIP5K2O43314 1243 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 TAL1P17542 331 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-203ENST00000378037 APOA5Q6Q788 366 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 C2CD5Q86YS7 1000 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 ZNF654Q8IZM8 581 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 CDCA7Q9BWT1 371 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-203ENST00000378037 RNF41Q9H4P4 317 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-203ENST00000378037 ZSWIM4Q9H7M6 989 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 CLIP2Q9UDT6 1046 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 SPATA31A5Q5VU36 1347 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 SPATA31A7Q8IWB4 1347 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
CKAP2-203ENST00000378037 KRT18P05783 430 aaKnown RBP9.33□□□□□ -0.92
CKAP2-203ENST00000378037 PTGS1P23219 599 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 NAPAP54920 295 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 LRMPQ12912 555 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 ZNF408Q9H9D4 720 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 NUP188Q5SRE5 1749 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 TPM4P67936 248 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 CDK5RAP3Q96JB5 506 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 MMRN2Q9H8L6 949 aa9.33□□□□□ -0.92
CKAP2-203ENST00000378037 SEC63Q9UGP8 760 aaKnown RBP9.33□□□□□ -0.92
CKAP2-203ENST00000378037 POLR2DO15514 142 aaKnown RBP9.32□□□□□ -0.92
CKAP2-203ENST00000378037 RXRBP28702 533 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 TTLL12Q14166 644 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-203ENST00000378037 MAEAQ7L5Y9 396 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 OXER1Q8TDS5 423 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 INTS4Q96HW7 963 aaKnown RBP9.32□□□□□ -0.92
CKAP2-203ENST00000378037 TTC14Q96N46 770 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 USP40Q9NVE5 1235 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 TCEAL9Q9UHQ7 104 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 PCDHAC2Q9Y5I4 1007 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 CASZ1Q86V15 1759 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 RGPD5Q99666 1765 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 RPS6KA4O75676 772 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 NTSR2O95665 410 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 CASP7P55210 303 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 PNOCQ13519 176 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 PLS1Q14651 629 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 KCTD1Q719H9 257 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 NRBP1Q9UHY1 535 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 DLG5Q8TDM6 1919 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 SALL3Q9BXA9 1300 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 ZNF76P36508 570 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 CCDC173Q0VFZ6 552 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 SPTY2D1Q68D10 685 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-203ENST00000378037 TMC6Q7Z403 805 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms