RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 SNX16P57768 344 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 SSH3Q8TE77 659 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 ARMT1Q9H993 441 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 CBX8Q9HC52 389 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 ACTN2P35609 894 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 RPS8P62241 208 aaKnown RBP12.33□□□□□ -0.44
MDC1-201ENST00000376406 ZBTB38Q8NAP3 1195 aaPredicted RBP12.33□□□□□ -0.44
MDC1-201ENST00000376406 KLHDC4Q8TBB5 520 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 SYNCQ9H7C4 482 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 LUC7L2Q9Y383 392 aaKnown RBP12.33□□□□□ -0.44
MDC1-201ENST00000376406 RGS12O14924 1447 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 CDK12Q9NYV4 1490 aaPredicted RBP12.33□□□□□ -0.44
MDC1-201ENST00000376406 SV2BQ7L1I2 683 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 STMN4Q9H169 189 aaPredicted RBP12.33□□□□□ -0.44
MDC1-201ENST00000376406 BRD1O95696 1058 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 IL6STP40189 918 aaPredicted RBP12.33□□□□□ -0.44
MDC1-201ENST00000376406 SMTNP53814 917 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 TIGD1Q96MW7 591 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 LZTFL1Q9NQ48 299 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 NOD1Q9Y239 953 aa12.33□□□□□ -0.44
MDC1-201ENST00000376406 FAM13AO94988 1023 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 ZNF174Q15697 407 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
MDC1-201ENST00000376406 GADD45BO75293 160 aaPredicted RBP12.32□□□□□ -0.44
MDC1-201ENST00000376406 HAUS3Q68CZ6 603 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 GUCA1BQ9UMX6 200 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 UNC5CLQ8IV45 518 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 CCDC117Q8IWD4 279 aaPredicted RBP12.32□□□□□ -0.44
MDC1-201ENST00000376406 USP6P35125 1406 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 FSD2A1L4K1 749 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 GTF3C6Q969F1 213 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 ZNF594Q96JF6 807 aaPredicted RBP12.32□□□□□ -0.44
MDC1-201ENST00000376406 OGFRQ9NZT2 677 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 SYNRGQ9UMZ2 1314 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 NCAPD2Q15021 1401 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 WDR17Q8IZU2 1322 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 NT5C2P49902 561 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 KARSQ15046 597 aaKnown RBP12.32□□□□□ -0.44
MDC1-201ENST00000376406 SULF1Q8IWU6 871 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 PUF60Q9UHX1 559 aaKnown RBP12.32□□□□□ -0.44
MDC1-201ENST00000376406 RPL13P26373 211 aaKnown RBP12.32□□□□□ -0.44
MDC1-201ENST00000376406 IRX3P78415 501 aaPredicted RBP12.32□□□□□ -0.44
MDC1-201ENST00000376406 MCM6Q14566 821 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 CNNM4Q6P4Q7 775 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 DNAJC5Q9H3Z4 198 aa12.32□□□□□ -0.44
MDC1-201ENST00000376406 CYP26C1Q6V0L0 522 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 NCOA5Q9HCD5 579 aaKnown RBP12.31□□□□□ -0.44
MDC1-201ENST00000376406 HAUS2Q9NVX0 235 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 LEMD3Q9Y2U8 911 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 GLI2P10070 1586 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 LOC102724428A0A0B4J2F2 783 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 ZNF202O95125 648 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 SIK1P57059 783 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 SPATA5Q8NB90 893 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 E7EWF7 191 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 SEMA3EO15041 775 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 TMED8Q6PL24 325 aaPredicted RBP12.31□□□□□ -0.44
MDC1-201ENST00000376406 CCDC65Q8IXS2 484 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 CHURC1Q8WUH1 139 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 TCHPQ9BT92 498 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 NSRP1Q9H0G5 558 aaKnown RBP12.31□□□□□ -0.44
MDC1-201ENST00000376406 NOP56O00567 594 aaKnown RBP12.31□□□□□ -0.44
MDC1-201ENST00000376406 C2CD5Q86YS7 1000 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 SLC8A3P57103 927 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 MLKLQ8NB16 471 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 SSX2IPQ9Y2D8 614 aa12.31□□□□□ -0.44
MDC1-201ENST00000376406 M0QZ92 97 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 ME3Q16798 604 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 ARPP21Q9UBL0 812 aaPredicted RBP12.3□□□□□ -0.44
MDC1-201ENST00000376406 HDXQ7Z353 690 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 CCDC97Q96F63 343 aaPredicted RBP12.3□□□□□ -0.44
MDC1-201ENST00000376406 PLA2R1Q13018 1463 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 BACH1O14867 736 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 POLR2DO15514 142 aaKnown RBP12.3□□□□□ -0.44
MDC1-201ENST00000376406 CCNT1O60563 726 aaKnown RBP12.3□□□□□ -0.44
MDC1-201ENST00000376406 PPP2R3AQ06190 1150 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 IFT74Q96LB3 600 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 TTF2Q9UNY4 1162 aaKnown RBP12.3□□□□□ -0.44
MDC1-201ENST00000376406 FANCCQ00597 558 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 IGSF22Q8N9C0 903 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 BBOX1O75936 387 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 CAPZA3Q96KX2 299 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 USP44Q9H0E7 712 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 CA8P35219 290 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 TERF1P54274 439 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 TAF12Q16514 161 aa12.3□□□□□ -0.44
MDC1-201ENST00000376406 MAP3K15Q6ZN16 1313 aa12.29□□□□□ -0.44
MDC1-201ENST00000376406 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
MDC1-201ENST00000376406 ZNF274Q96GC6 653 aaPredicted RBP12.29□□□□□ -0.44
MDC1-201ENST00000376406 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
MDC1-201ENST00000376406 MADDQ8WXG6 1647 aa12.29□□□□□ -0.44
MDC1-201ENST00000376406 UBE4AQ14139 1066 aa12.29□□□□□ -0.44
MDC1-201ENST00000376406 SMCR8Q8TEV9 937 aaPredicted RBP12.29□□□□□ -0.44
MDC1-201ENST00000376406 ZSWIM6Q9HCJ5 1215 aa12.29□□□□□ -0.44
MDC1-201ENST00000376406 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.29□□□□□ -0.44
MDC1-201ENST00000376406 V9GYY5 206 aaPredicted RBP12.29□□□□□ -0.44
MDC1-201ENST00000376406 CCT6AP40227 531 aaKnown RBP12.29□□□□□ -0.44
MDC1-201ENST00000376406 PIK3AP1Q6ZUJ8 805 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms