RNA–Protein interactions for RNA: ENST00000376238.4

SLC28A3-201, Transcript of solute carrier family 28 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A3, Length 4,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A3-201ENST00000376238 NUB1Q9Y5A7 615 aa6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 LRRFIP2Q9Y608 721 aaKnown RBP6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 CA12O43570 354 aa6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 KRT7P08729 469 aa6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 HOXD10P28358 340 aa6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 BRPF1P55201 1214 aaPredicted RBP6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 PRPF4BQ13523 1007 aaKnown RBP6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 NFIXQ14938 502 aa6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 LRSAM1Q6UWE0 723 aa6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 CCDC89Q8N998 374 aa6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 TTC14Q96N46 770 aa6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 MRFAP1Q9Y605 127 aa6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 TACC3Q9Y6A5 838 aa6.35□□□□□ -1.39
SLC28A3-201ENST00000376238 CIAO1O76071 339 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 ALDH1A1P00352 501 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 FOSP01100 380 aaPredicted RBP6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 ATP2B3Q16720 1220 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 LINC00116Q8NCU8 138 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 LPIN2Q92539 896 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 CCSER2Q9H7U1 834 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 CHCHD3Q9NX63 227 aaKnown RBP6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 MAGEC2Q9UBF1 373 aaPredicted RBP6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 SRGAP3O43295 1099 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 FAM182BQ5T319 152 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 FILIP1Q7Z7B0 1213 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 AGBL3Q8NEM8 1001 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 PHACTR3Q96KR7 559 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 EHMT1Q9H9B1 1298 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 BSDC1Q9NW68 430 aaPredicted RBP6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 GJC2Q5T442 439 aaPredicted RBP6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 TTC19Q6DKK2 380 aaPredicted RBP6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 SYNE4Q8N205 404 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 MGARPQ8TDB4 240 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 PLA2G12BQ9BX93 195 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 GPR108Q9NPR9 543 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 PICK1Q9NRD5 415 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 ATP6V0A2Q9Y487 856 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 GOLGA8QA0A0J9YX86 632 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 GOLGA8OA6NCC3 632 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 GOLGA8NF8WBI6 632 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 SASH1O94885 1247 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 LDHBP07195 334 aaKnown RBP6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 ATN1P54259 1190 aaPredicted RBP6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 FKBP1BP68106 108 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 MAP2K1Q02750 393 aaPredicted RBP6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 CEP57Q86XR8 500 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 LTBP3Q9NS15 1303 aa6.34□□□□□ -1.39
SLC28A3-201ENST00000376238 USP17L3A6NCW0 530 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 USP17L4A6NCW7 530 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 UNCXA6NJT0 531 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 GYS1P13807 737 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 SREBF2Q12772 1141 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 MCM6Q14566 821 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 FBXW10Q5XX13 1052 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 USP50Q70EL3 339 aaPredicted RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 USP17L1Q7RTZ2 530 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 GIPC2Q8TF65 315 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 PLEKHF1Q96S99 279 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 ZNF219Q9P2Y4 722 aaPredicted RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 CTAGE9A4FU28 777 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 COPB2P35606 906 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 ZC3H15Q8WU90 426 aaKnown RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 SMARCE1Q969G3 411 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 TEKT1Q969V4 418 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 CCDC113Q9H0I3 377 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 RASSF4Q9H2L5 321 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 DSEQ9UL01 958 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 SPECC1L-ADORA2AF8WAN1 911 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 ERCC5P28715 1186 aaPredicted RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 PSMD7P51665 324 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 PSMD2Q13200 908 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 MAP7Q14244 749 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 CCDC6Q16204 474 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 TTC31Q49AM3 519 aaPredicted RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 EAPPQ56P03 285 aaPredicted RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 TMEM57Q8N5G2 664 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 CCDC102AQ96A19 550 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 EYA2O00167 538 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 ZKSCAN1P17029 563 aaPredicted RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 GCKP35557 465 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 POLR2FP61218 127 aaKnown RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 FKBP1AP62942 108 aaKnown RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 WHAMMP3Q1A5X7 153 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 FHDC1Q9C0D6 1143 aaPredicted RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 CAPN10Q9HC96 672 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 TMOD4Q9NZQ9 345 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 PNMA3Q9UL41 463 aa6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 NOB1Q9ULX3 412 aaKnown RBP6.33□□□□□ -1.4
SLC28A3-201ENST00000376238 PNPLA7Q6ZV29 1317 aa6.32□□□□□ -1.4
SLC28A3-201ENST00000376238 CREB3O43889 395 aa6.32□□□□□ -1.4
SLC28A3-201ENST00000376238 ERLIN2O94905 339 aa6.32□□□□□ -1.4
SLC28A3-201ENST00000376238 ATP2B1P20020 1258 aa6.32□□□□□ -1.4
SLC28A3-201ENST00000376238 HDLBPQ00341 1268 aaKnown RBP6.32□□□□□ -1.4
SLC28A3-201ENST00000376238 DNAJC21Q5F1R6 531 aaKnown RBP6.32□□□□□ -1.4
SLC28A3-201ENST00000376238 TMCO5AQ8N6Q1 288 aa6.32□□□□□ -1.4
SLC28A3-201ENST00000376238 BBOF1Q8ND07 529 aa6.32□□□□□ -1.4
SLC28A3-201ENST00000376238 SYT17Q9BSW7 474 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms