RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 DEFB129Q9H1M3 183 aa24.99■■□□□ 1.59
HLA-C-201ENST00000376228 ARMT1Q9H993 441 aa24.99■■□□□ 1.59
HLA-C-201ENST00000376228 ZNF70Q9UC06 446 aaPredicted RBP24.99■■□□□ 1.59
HLA-C-201ENST00000376228 WDR19Q8NEZ3 1342 aa24.99■■□□□ 1.59
HLA-C-201ENST00000376228 THSD7BQ9C0I4 1608 aa24.99■■□□□ 1.59
HLA-C-201ENST00000376228 MAGEB6P1A0A0J9YX57 407 aa24.98■■□□□ 1.59
HLA-C-201ENST00000376228 LCORLQ8N3X6 602 aa24.98■■□□□ 1.59
HLA-C-201ENST00000376228 NACAP1Q9BZK3 213 aa24.98■■□□□ 1.59
HLA-C-201ENST00000376228 SUGT1Q9Y2Z0 365 aa24.98■■□□□ 1.59
HLA-C-201ENST00000376228 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.98■■□□□ 1.59
HLA-C-201ENST00000376228 MECOMQ03112 1051 aa24.97■■□□□ 1.59
HLA-C-201ENST00000376228 DIXDC1Q155Q3 683 aa24.97■■□□□ 1.59
HLA-C-201ENST00000376228 SPDYE2Q495Y8 402 aa24.97■■□□□ 1.59
HLA-C-201ENST00000376228 ADGRA1Q86SQ6 560 aa24.97■■□□□ 1.59
HLA-C-201ENST00000376228 TPCN1Q9ULQ1 816 aa24.97■■□□□ 1.59
HLA-C-201ENST00000376228 AOC2O75106 756 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 APPP05067 770 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 LDHBP07195 334 aaKnown RBP24.96■■□□□ 1.59
HLA-C-201ENST00000376228 ECE1P42892 770 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 HDLBPQ00341 1268 aaKnown RBP24.96■■□□□ 1.59
HLA-C-201ENST00000376228 PRKG1Q13976 671 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 CLEC17AQ6ZS10 378 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 EPB41L4AQ9HCS5 686 aaPredicted RBP24.96■■□□□ 1.59
HLA-C-201ENST00000376228 HSPA1AP0DMV8 641 aaKnown RBP24.96■■□□□ 1.59
HLA-C-201ENST00000376228 HSPA1BP0DMV9 641 aaKnown RBP24.96■■□□□ 1.59
HLA-C-201ENST00000376228 TTLL12Q14166 644 aaPredicted RBP24.96■■□□□ 1.59
HLA-C-201ENST00000376228 ME3Q16798 604 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 GIMAP6Q6P9H5 292 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 NCOA7Q8NI08 942 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 HHIPL1Q96JK4 782 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 NAPBQ9H115 298 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 FZD1Q9UP38 647 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 SLC4A4Q9Y6R1 1079 aa24.96■■□□□ 1.59
HLA-C-201ENST00000376228 TCP10L2B9ZVM9 353 aa24.95■■□□□ 1.58
HLA-C-201ENST00000376228 CACNB3P54284 484 aa24.95■■□□□ 1.58
HLA-C-201ENST00000376228 Q6ZUG5 572 aa24.95■■□□□ 1.58
HLA-C-201ENST00000376228 ZDHHC15Q96MV8 337 aa24.95■■□□□ 1.58
HLA-C-201ENST00000376228 SSC5DA1L4H1 1573 aa24.94■■□□□ 1.58
HLA-C-201ENST00000376228 LARGE1O95461 756 aa24.94■■□□□ 1.58
HLA-C-201ENST00000376228 NF2P35240 595 aa24.94■■□□□ 1.58
HLA-C-201ENST00000376228 RASA3Q14644 834 aa24.94■■□□□ 1.58
HLA-C-201ENST00000376228 APOBEC3HQ6NTF7 200 aaKnown RBP24.94■■□□□ 1.58
HLA-C-201ENST00000376228 MB21D2Q8IYB1 491 aaPredicted RBP24.94■■□□□ 1.58
HLA-C-201ENST00000376228 MIGA1Q8NAN2 632 aa24.94■■□□□ 1.58
HLA-C-201ENST00000376228 NBPF3Q9H094 633 aa24.94■■□□□ 1.58
HLA-C-201ENST00000376228 EVCP57679 992 aa24.93■■□□□ 1.58
HLA-C-201ENST00000376228 HAND2P61296 217 aa24.93■■□□□ 1.58
HLA-C-201ENST00000376228 GSTO1P78417 241 aa24.93■■□□□ 1.58
HLA-C-201ENST00000376228 RGMBQ6NW40 437 aa24.93■■□□□ 1.58
HLA-C-201ENST00000376228 HHIPL2Q6UWX4 724 aa24.93■■□□□ 1.58
HLA-C-201ENST00000376228 TCEANC2Q96MN5 208 aa24.93■■□□□ 1.58
HLA-C-201ENST00000376228 DAGLAQ9Y4D2 1042 aa24.93■■□□□ 1.58
HLA-C-201ENST00000376228 UBE2Q2LH0YL09 131 aa24.92■■□□□ 1.58
HLA-C-201ENST00000376228 TNPO1Q92973 898 aaKnown RBP24.92■■□□□ 1.58
HLA-C-201ENST00000376228 MRIQ9BWK5 157 aa24.92■■□□□ 1.58
HLA-C-201ENST00000376228 PRKAB2O43741 272 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 MCM5P33992 734 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 ZNF157P51786 506 aaPredicted RBP24.91■■□□□ 1.58
HLA-C-201ENST00000376228 NBR1Q14596 966 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 NBPF12Q5TAG4 269 aaPredicted RBP24.91■■□□□ 1.58
HLA-C-201ENST00000376228 ANAPC4Q9UJX5 808 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 PPP2R3BQ9Y5P8 575 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 LDHCP07864 332 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 PDIA4P13667 645 aaKnown RBP24.91■■□□□ 1.58
HLA-C-201ENST00000376228 FKBP1BP68106 108 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 ST3GAL1Q11201 340 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 TRDNQ13061 729 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 TNFAIP1Q13829 316 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 RALYLQ86SE5 291 aaKnown RBP24.91■■□□□ 1.58
HLA-C-201ENST00000376228 DZIP1Q86YF9 867 aaKnown RBP24.91■■□□□ 1.58
HLA-C-201ENST00000376228 CERS3Q8IU89 383 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 CDAN1Q8IWY9 1227 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 LARP6Q9BRS8 491 aaKnown RBP24.91■■□□□ 1.58
HLA-C-201ENST00000376228 TMEM39BQ9GZU3 492 aa24.91■■□□□ 1.58
HLA-C-201ENST00000376228 TBC1D10CQ8IV04 446 aa24.9■■□□□ 1.58
HLA-C-201ENST00000376228 ZIC5Q96T25 663 aa24.9■■□□□ 1.58
HLA-C-201ENST00000376228 BAZ2AQ9UIF9 1905 aaKnown RBP24.89■■□□□ 1.58
HLA-C-201ENST00000376228 FAM155AB1AL88 458 aaPredicted RBP24.89■■□□□ 1.57
HLA-C-201ENST00000376228 TDO2P48775 406 aa24.89■■□□□ 1.57
HLA-C-201ENST00000376228 PPP4CP60510 307 aa24.89■■□□□ 1.57
HLA-C-201ENST00000376228 CCDC83Q8IWF9 413 aa24.89■■□□□ 1.57
HLA-C-201ENST00000376228 STAG1Q8WVM7 1258 aa24.89■■□□□ 1.57
HLA-C-201ENST00000376228 BRF1Q92994 677 aa24.89■■□□□ 1.57
HLA-C-201ENST00000376228 CHMP4CQ96CF2 233 aa24.89■■□□□ 1.57
HLA-C-201ENST00000376228 ZNF274Q96GC6 653 aaPredicted RBP24.89■■□□□ 1.57
HLA-C-201ENST00000376228 CNNM2Q9H8M5 875 aa24.89■■□□□ 1.57
HLA-C-201ENST00000376228 SMC3Q9UQE7 1217 aa24.89■■□□□ 1.57
HLA-C-201ENST00000376228 OTOFQ9HC10 1997 aa24.89■■□□□ 1.57
HLA-C-201ENST00000376228 MCM4P33991 863 aa24.88■■□□□ 1.57
HLA-C-201ENST00000376228 DYNLL1P63167 89 aaKnown RBP24.88■■□□□ 1.57
HLA-C-201ENST00000376228 FAM163AQ96GL9 167 aaPredicted RBP24.88■■□□□ 1.57
HLA-C-201ENST00000376228 GBP4Q96PP9 640 aa24.88■■□□□ 1.57
HLA-C-201ENST00000376228 CRNKL1Q9BZJ0 848 aaKnown RBP24.88■■□□□ 1.57
HLA-C-201ENST00000376228 ATP8A2Q9NTI2 1148 aa24.88■■□□□ 1.57
HLA-C-201ENST00000376228 TMOD2Q9NZR1 351 aa24.88■■□□□ 1.57
HLA-C-201ENST00000376228 ANGEL1Q9UNK9 670 aaKnown RBP24.88■■□□□ 1.57
HLA-C-201ENST00000376228 BRD1O95696 1058 aa24.87■■□□□ 1.57
HLA-C-201ENST00000376228 FGD1P98174 961 aa24.87■■□□□ 1.57
HLA-C-201ENST00000376228 AKNAD1Q5T1N1 836 aa24.87■■□□□ 1.57
HLA-C-201ENST00000376228 GTF3C6Q969F1 213 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms