RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 USP49Q70CQ1 688 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 HOMER1Q86YM7 354 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 TMEM139Q8IV31 216 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 LCORLQ8N3X6 602 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 SEC31BQ9NQW1 1179 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 SLAIN2Q9P270 581 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 DNAI1Q9UI46 699 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 MMP1P03956 469 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 REXO1L1PQ8IX06 675 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 OXER1Q8TDS5 423 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 FBXO2Q9UK22 296 aaPredicted RBP14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 PCDHB6Q9Y5E3 794 aa14.26□□□□□ -0.13
TNFSF13B-201ENST00000375887 BCAMP50895 628 aa14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 SHISA4Q96DD7 197 aa14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 FAM53CQ9NYF3 392 aa14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 MAN1B1Q9UKM7 699 aa14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 POLR2DO15514 142 aaKnown RBP14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 PTPREP23469 700 aa14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 OLFM4Q6UX06 510 aa14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 MFSD6Q6ZSS7 791 aa14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 MIGA1Q8NAN2 632 aa14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 SERTAD1Q9UHV2 236 aa14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 ECM29Q5VYK3 1845 aa14.25□□□□□ -0.13
TNFSF13B-201ENST00000375887 STK36Q9NRP7 1315 aa14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 SLIT2O94813 1529 aa14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 TOP1P11387 765 aaKnown RBP14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 MAP3K12Q12852 859 aa14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 DZIP3Q86Y13 1208 aaKnown RBP14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 TRMT44Q8IYL2 757 aaKnown RBP14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 ZNF34Q8IZ26 560 aa14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 PDILTQ8N807 584 aa14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 ST7Q9NRC1 585 aa14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 hCG_1642624A0A1W2PR95 340 aa14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 H2AFXP16104 143 aaPredicted RBP14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 RTN1Q16799 776 aa14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 CRACR2BQ8N4Y2 399 aaPredicted RBP14.24□□□□□ -0.13
TNFSF13B-201ENST00000375887 LRP6O75581 1613 aa14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 CBFA2T2O43439 604 aa14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 SLFN14P0C7P3 912 aa14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 SARSP49591 514 aaKnown RBP14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 POSTNQ15063 836 aa14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 SUSD4Q5VX71 490 aa14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 NFE2L3Q9Y4A8 694 aa14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 SLC4A4Q9Y6R1 1079 aa14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 MROH5Q6ZUA9 1318 aa14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 FAM205CA6NFA0 338 aa14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 ZNF18P17022 549 aa14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 TBX2Q13207 712 aaPredicted RBP14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 FAM177A1Q8N128 213 aaPredicted RBP14.23□□□□□ -0.13
TNFSF13B-201ENST00000375887 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 VWA3AA6NCI4 1184 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 NRDCO43847 1150 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 SLC5A1P13866 664 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 TDO2P48775 406 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 ADKP55263 362 aaKnown RBP14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 WTAPQ15007 396 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 NT5DC1Q5TFE4 455 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 ADGRA1Q86SQ6 560 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 KRT222Q8N1A0 295 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 NUP133Q8WUM0 1156 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 STAG1Q8WVM7 1258 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 KRT23Q9C075 422 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 CNNM2Q9H8M5 875 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 SAMSN1Q9NSI8 373 aaKnown RBP14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 BTG4Q9NY30 223 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 MYH3P11055 1940 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 XIRP1Q702N8 1843 aaKnown RBP14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 BCL9O00512 1426 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 ARHGAP29Q52LW3 1261 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 FOXP1Q9H334 677 aaPredicted RBP14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 CABP5Q9NP86 173 aa14.22□□□□□ -0.13
TNFSF13B-201ENST00000375887 ERVV-1B6SEH8 477 aa14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 CLCN6P51797 869 aa14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 MORC3Q14149 939 aa14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 DHX8Q14562 1220 aaKnown RBP14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 SAFBQ15424 915 aaKnown RBP eCLIP14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 EARS2Q5JPH6 523 aaKnown RBP14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 TC2NQ8N9U0 490 aa14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 FANCBQ8NB91 859 aa14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 CSRNP2Q9H175 543 aa14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 PPP2R2CQ9Y2T4 447 aa14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 PARP3Q9Y6F1 533 aa14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 PHLPP2Q6ZVD8 1323 aa14.21□□□□□ -0.13
TNFSF13B-201ENST00000375887 A0A087X0B3 334 aa14.21□□□□□ -0.14
TNFSF13B-201ENST00000375887 ACTN4O43707 911 aaKnown RBP14.21□□□□□ -0.14
TNFSF13B-201ENST00000375887 RILPL1Q5EBL4 403 aa14.21□□□□□ -0.14
TNFSF13B-201ENST00000375887 TOGARAM2Q6ZUX3 1019 aa14.21□□□□□ -0.14
TNFSF13B-201ENST00000375887 ELOA2Q8IYF1 753 aaPredicted RBP14.21□□□□□ -0.14
TNFSF13B-201ENST00000375887 TRIM22Q8IYM9 498 aa14.21□□□□□ -0.14
TNFSF13B-201ENST00000375887 SDR42E1Q8WUS8 393 aa14.21□□□□□ -0.14
TNFSF13B-201ENST00000375887 WASF1Q92558 559 aa14.21□□□□□ -0.14
TNFSF13B-201ENST00000375887 WDR24Q96S15 920 aa14.21□□□□□ -0.14
TNFSF13B-201ENST00000375887 MPHOSPH8Q99549 860 aa14.21□□□□□ -0.14
TNFSF13B-201ENST00000375887 NUP98P52948 1817 aa14.2□□□□□ -0.14
TNFSF13B-201ENST00000375887 NID2Q14112 1375 aa14.2□□□□□ -0.14
TNFSF13B-201ENST00000375887 WNT7AO00755 349 aa14.2□□□□□ -0.14
TNFSF13B-201ENST00000375887 URI1O94763 535 aaPredicted RBP14.2□□□□□ -0.14
TNFSF13B-201ENST00000375887 CASP1P29466 404 aa14.2□□□□□ -0.14
TNFSF13B-201ENST00000375887 ZNF654Q8IZM8 581 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms