RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 C16orf45Q96MC5 204 aaPredicted RBP16.17■□□□□ 0.18
MSH5-202ENST00000375740 SLC26A6Q9BXS9 759 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 TM4SF1P30408 202 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 SSRP1Q08945 709 aaKnown RBP16.17■□□□□ 0.18
MSH5-202ENST00000375740 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
MSH5-202ENST00000375740 FMR1NBQ8N0W7 255 aaPredicted RBP16.17■□□□□ 0.18
MSH5-202ENST00000375740 ANKRD2Q9GZV1 360 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 NHSQ6T4R5 1651 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 ERICH2A1L162 156 aa16.16■□□□□ 0.18
MSH5-202ENST00000375740 ANAPC4Q9UJX5 808 aa16.16■□□□□ 0.18
MSH5-202ENST00000375740 THSD7AQ9UPZ6 1657 aa16.16■□□□□ 0.18
MSH5-202ENST00000375740 HIBADHP31937 336 aaKnown RBP16.16■□□□□ 0.18
MSH5-202ENST00000375740 NDUFA8P51970 172 aa16.16■□□□□ 0.18
MSH5-202ENST00000375740 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
MSH5-202ENST00000375740 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
MSH5-202ENST00000375740 SEMA3EO15041 775 aa16.15■□□□□ 0.18
MSH5-202ENST00000375740 FMNL1O95466 1100 aaPredicted RBP16.15■□□□□ 0.18
MSH5-202ENST00000375740 IFNAR1P17181 557 aa16.15■□□□□ 0.18
MSH5-202ENST00000375740 TRIM29Q14134 588 aa16.15■□□□□ 0.18
MSH5-202ENST00000375740 TMTC2Q8N394 836 aa16.15■□□□□ 0.18
MSH5-202ENST00000375740 MTA3Q9BTC8 594 aa16.15■□□□□ 0.18
MSH5-202ENST00000375740 ECM29Q5VYK3 1845 aa16.15■□□□□ 0.18
MSH5-202ENST00000375740 CYP2D7A0A087X1C5 515 aa16.15■□□□□ 0.18
MSH5-202ENST00000375740 RFC4P35249 363 aa16.15■□□□□ 0.18
MSH5-202ENST00000375740 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
MSH5-202ENST00000375740 TDRD7Q8NHU6 1098 aaKnown RBP16.15■□□□□ 0.18
MSH5-202ENST00000375740 NRBP1Q9UHY1 535 aa16.15■□□□□ 0.18
MSH5-202ENST00000375740 STK36Q9NRP7 1315 aa16.14■□□□□ 0.18
MSH5-202ENST00000375740 NPHP1O15259 732 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 RTN1Q16799 776 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 TRAPPC3LQ5T215 181 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 ERCC4Q92889 916 aaPredicted RBP16.14■□□□□ 0.17
MSH5-202ENST00000375740 NSUN4Q96CB9 384 aaKnown RBP16.14■□□□□ 0.17
MSH5-202ENST00000375740 GJD4Q96KN9 370 aaPredicted RBP16.14■□□□□ 0.17
MSH5-202ENST00000375740 UBAC1Q9BSL1 405 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 DDX41Q9UJV9 622 aaKnown RBP16.14■□□□□ 0.17
MSH5-202ENST00000375740 CAVIN2O95810 425 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 GUCY1A2P33402 732 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 MECOMQ03112 1051 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 SLC39A14Q15043 492 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 C11orf57Q6ZUT1 292 aaPredicted RBP16.14■□□□□ 0.17
MSH5-202ENST00000375740 TXNRD3Q86VQ6 643 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 ESR2Q92731 530 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.14■□□□□ 0.17
MSH5-202ENST00000375740 BRIP1Q9BX63 1249 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 NID2Q14112 1375 aa16.14■□□□□ 0.17
MSH5-202ENST00000375740 STX1AQ16623 288 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 AXDND1Q5T1B0 1012 aaPredicted RBP16.13■□□□□ 0.17
MSH5-202ENST00000375740 CMTR1Q8N1G2 835 aaKnown RBP16.13■□□□□ 0.17
MSH5-202ENST00000375740 CCDC82Q8N4S0 544 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 NUP133Q8WUM0 1156 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 SDF4Q9BRK5 362 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 TAF1LQ8IZX4 1826 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 BAZ2AQ9UIF9 1905 aaKnown RBP16.13■□□□□ 0.17
MSH5-202ENST00000375740 A0A087WWV3 80 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 WDHD1O75717 1129 aaPredicted RBP16.13■□□□□ 0.17
MSH5-202ENST00000375740 MARCKSP29966 332 aaPredicted RBP16.13■□□□□ 0.17
MSH5-202ENST00000375740 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
MSH5-202ENST00000375740 IQCB1Q15051 598 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 SEC23AQ15436 765 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 CCDC186Q7Z3E2 898 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 ZNF654Q8IZM8 581 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 FANCBQ8NB91 859 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 WASF1Q92558 559 aa16.13■□□□□ 0.17
MSH5-202ENST00000375740 CTR9Q6PD62 1173 aa16.12■□□□□ 0.17
MSH5-202ENST00000375740 FAM196AQ6ZSG2 479 aa16.12■□□□□ 0.17
MSH5-202ENST00000375740 NBPF11Q86T75 865 aa16.12■□□□□ 0.17
MSH5-202ENST00000375740 TNKSO95271 1327 aa16.12■□□□□ 0.17
MSH5-202ENST00000375740 LY75O60449 1722 aa16.12■□□□□ 0.17
MSH5-202ENST00000375740 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
MSH5-202ENST00000375740 TRIM22Q8IYM9 498 aa16.12■□□□□ 0.17
MSH5-202ENST00000375740 CRACR2BQ8N4Y2 399 aaPredicted RBP16.12■□□□□ 0.17
MSH5-202ENST00000375740 CMA1P23946 247 aa16.12■□□□□ 0.17
MSH5-202ENST00000375740 PTPAQ15257 358 aa16.12■□□□□ 0.17
MSH5-202ENST00000375740 PLCD3Q8N3E9 789 aa16.12■□□□□ 0.17
MSH5-202ENST00000375740 AATFQ9NY61 560 aaKnown RBP eCLIP16.12■□□□□ 0.17
MSH5-202ENST00000375740 JAG2Q9Y219 1238 aa16.12■□□□□ 0.17
MSH5-202ENST00000375740 PDS5AQ29RF7 1337 aaKnown RBP16.11■□□□□ 0.17
MSH5-202ENST00000375740 CCDC196A0A1B0GTZ2 297 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 USP17L21D6R901 530 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 PRDM1O75626 825 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 PRDX5P30044 214 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 NFIXQ14938 502 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 TAF3Q5VWG9 929 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 MAP3K14Q99558 947 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 TRIM5Q9C035 493 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 MYH2Q9UKX2 1941 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 MYH13Q9UKX3 1938 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 ZNF202O95125 648 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 TNNT1P13805 278 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 GABPB1Q06547 395 aaPredicted RBP16.11■□□□□ 0.17
MSH5-202ENST00000375740 TERF2Q15554 542 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 SLC51AQ86UW1 340 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 ZSCAN10Q96SZ4 725 aaPredicted RBP16.11■□□□□ 0.17
MSH5-202ENST00000375740 ANO10Q9NW15 660 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.11■□□□□ 0.17
MSH5-202ENST00000375740 KCNJ14Q9UNX9 436 aa16.11■□□□□ 0.17
MSH5-202ENST00000375740 V9GYY5 206 aaPredicted RBP16.11■□□□□ 0.17
MSH5-202ENST00000375740 BTBD18B2RXH4 712 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms