RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 N4BP3O15049 544 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 FOXP2O15409 715 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 ZSCAN12O43309 604 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 ZPR1O75312 459 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 YEATS4O95619 227 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 EVX2Q03828 476 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.25
MCF2L-202ENST00000375597 WTAPQ15007 396 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 RASGRP4Q8TDF6 673 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 POLR3EQ9NVU0 708 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 TRIM10Q9UDY6 481 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 AKAP2Q9Y2D5 859 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 ANKRD18BA2A2Z9 1011 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 SASH3O75995 380 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 BRAPQ7Z569 592 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 DNAJC5Q9H3Z4 198 aa13.46□□□□□ -0.25
MCF2L-202ENST00000375597 H7C1W4 665 aa13.46□□□□□ -0.26
MCF2L-202ENST00000375597 PTPROQ16827 1216 aa13.46□□□□□ -0.26
MCF2L-202ENST00000375597 PDE11AQ9HCR9 933 aa13.46□□□□□ -0.26
MCF2L-202ENST00000375597 HOOK1Q9UJC3 728 aaKnown RBP13.46□□□□□ -0.26
MCF2L-202ENST00000375597 FHOD1Q9Y613 1164 aa13.46□□□□□ -0.26
MCF2L-202ENST00000375597 PXDNLA1KZ92 1463 aa13.46□□□□□ -0.26
MCF2L-202ENST00000375597 TRIM66O15016 1216 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 CASP14P31944 242 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-202ENST00000375597 RBL2Q08999 1139 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 FAM47AQ5JRC9 791 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.45□□□□□ -0.26
MCF2L-202ENST00000375597 UBN2Q6ZU65 1347 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 FER1L4A9Z1Z3 1794 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 NMT2O60551 498 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 CDKL5O76039 1030 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 RRAGBQ5VZM2 374 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 TTC19Q6DKK2 380 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-202ENST00000375597 NCAPH2Q6IBW4 605 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 CAGE1Q8TC20 777 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 INTS13Q9NVM9 706 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 PIK3C2AO00443 1686 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 RABL6Q3YEC7 729 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-202ENST00000375597 JAKMIP3Q5VZ66 844 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
MCF2L-202ENST00000375597 SRGAP2O75044 1071 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 PDIA4P13667 645 aaKnown RBP13.44□□□□□ -0.26
MCF2L-202ENST00000375597 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
MCF2L-202ENST00000375597 SF3A3Q12874 501 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■■■■□ 21.7
MCF2L-202ENST00000375597 OSBPL5Q9H0X9 879 aaPredicted RBP13.44□□□□□ -0.26
MCF2L-202ENST00000375597 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
MCF2L-202ENST00000375597 KIF2AO00139 706 aaPredicted RBP13.44□□□□□ -0.26
MCF2L-202ENST00000375597 CYP7A1P22680 504 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 VSTM4Q8IW00 320 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 NBPF3Q9H094 633 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 A0A1W2PQ27 194 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 A0A1W2PQ64 194 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 A0A1W2PQD8 194 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 KIF5CO60282 957 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 SART3Q15020 963 aaKnown RBP13.44□□□□□ -0.26
MCF2L-202ENST00000375597 SPECC1LQ69YQ0 1117 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 NOSTRINQ8IVI9 506 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 CPVLQ9H3G5 476 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 HDAC6Q9UBN7 1215 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 PARP3Q9Y6F1 533 aa13.44□□□□□ -0.26
MCF2L-202ENST00000375597 ARHGAP23Q9P227 1491 aa13.43□□□□□ -0.26
MCF2L-202ENST00000375597 CAPN2P17655 700 aa13.43□□□□□ -0.26
MCF2L-202ENST00000375597 RSPH14Q9UHP6 348 aa13.43□□□□□ -0.26
MCF2L-202ENST00000375597 UTYO14607 1347 aa13.43□□□□□ -0.26
MCF2L-202ENST00000375597 GYG1P46976 350 aa13.43□□□□□ -0.26
MCF2L-202ENST00000375597 CASP7P55210 303 aa13.43□□□□□ -0.26
MCF2L-202ENST00000375597 CHMP4BP1P59074 171 aa13.43□□□□□ -0.26
MCF2L-202ENST00000375597 EARS2Q5JPH6 523 aaKnown RBP13.43□□□□□ -0.26
MCF2L-202ENST00000375597 REXO1L1PQ8IX06 675 aa13.43□□□□□ -0.26
MCF2L-202ENST00000375597 IMPACTQ9P2X3 320 aa13.43□□□□□ -0.26
MCF2L-202ENST00000375597 WNT7AO00755 349 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 SH2B2O14492 632 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-202ENST00000375597 NAP1L1P55209 391 aaKnown RBP13.42□□□□□ -0.26
MCF2L-202ENST00000375597 PIK3AP1Q6ZUJ8 805 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 IFNL3Q8IZI9 196 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 SLC35F6Q8N357 371 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 VAT1LQ9HCJ6 419 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 ZBTB1Q9Y2K1 713 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 PLEKHA8P1O95397 391 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 RNASE9P60153 205 aaKnown RBP13.42□□□□□ -0.26
MCF2L-202ENST00000375597 DYNLL1P63167 89 aaKnown RBP13.42□□□□□ -0.26
MCF2L-202ENST00000375597 RIN2Q8WYP3 895 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-202ENST00000375597 HSD3B7Q9H2F3 369 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 NWD1Q149M9 1564 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 ZMYM6O95789 1325 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 SLIT1O75093 1534 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 MACROD2A1Z1Q3 448 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 MAP3K12Q12852 859 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 TRIM65Q6PJ69 517 aa13.42□□□□□ -0.26
MCF2L-202ENST00000375597 SYMPKQ92797 1274 aaKnown RBP13.42□□□□□ -0.26
MCF2L-202ENST00000375597 USP54Q70EL1 1684 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 TRIM49BA6NDI0 452 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 AKR1B15C9JRZ8 316 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-202ENST00000375597 ARHGAP6O43182 974 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 TADA3O75528 432 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 TPM1P09493 284 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 CCDC175P0C221 793 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 RASGRF1Q13972 1273 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms