RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FAN1Q9Y2M0 1017 aa13.89□□□□□ -0.19
C9orf3-203ENST00000375315 LAMB4A4D0S4 1761 aa13.89□□□□□ -0.19
C9orf3-203ENST00000375315 GOLGA6L9A6NEM1 432 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 ANKRD65E5RJM6 399 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 POTEB2H3BUK9 544 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 IGHMBP2P38935 993 aaKnown RBP13.88□□□□□ -0.19
C9orf3-203ENST00000375315 ANKRD1Q15327 319 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 TXNRD1Q16881 649 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 NWD2Q9ULI1 1742 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 ZAP70P43403 619 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 CCDC152Q4G0S7 254 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 POTEAQ6S8J7 498 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 CELF1Q92879 486 aaKnown RBP13.88□□□□□ -0.19
C9orf3-203ENST00000375315 MRFAP1Q9Y605 127 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 IDH1O75874 414 aaKnown RBP13.88□□□□□ -0.19
C9orf3-203ENST00000375315 PHKA1P46020 1223 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 PARP10Q53GL7 1025 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 STK11IPQ8N1F8 1099 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 FAM71BQ8TC56 605 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 ACBD3Q9H3P7 528 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 NARFQ9UHQ1 456 aa13.88□□□□□ -0.19
C9orf3-203ENST00000375315 ERLIN2O94905 339 aa13.87□□□□□ -0.19
C9orf3-203ENST00000375315 PSMA5P28066 241 aa13.87□□□□□ -0.19
C9orf3-203ENST00000375315 ZNF772Q68DY9 489 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-203ENST00000375315 PAG1Q9NWQ8 432 aa13.87□□□□□ -0.19
C9orf3-203ENST00000375315 AKAP2Q9Y2D5 859 aa13.87□□□□□ -0.19
C9orf3-203ENST00000375315 RIPOR2Q9Y4F9 1068 aa13.87□□□□□ -0.19
C9orf3-203ENST00000375315 GNG11P61952 73 aa13.87□□□□□ -0.19
C9orf3-203ENST00000375315 TRDNQ13061 729 aa13.87□□□□□ -0.19
C9orf3-203ENST00000375315 FAM177A1Q8N128 213 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-203ENST00000375315 PROM2Q8N271 834 aa13.87□□□□□ -0.19
C9orf3-203ENST00000375315 ATRNO75882 1429 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 PAPPAQ13219 1627 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 ONECUT3O60422 494 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-203ENST00000375315 ATP5JP18859 108 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 CNNM3Q8NE01 707 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 BCAMP50895 628 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 SETQ01105 290 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-203ENST00000375315 COL9A3Q14050 684 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-203ENST00000375315 NFIXQ14938 502 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 GPR101Q96P66 508 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-203ENST00000375315 H3BQV1 296 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 FANCGO15287 622 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 RESTQ13127 1097 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 BEND6Q5SZJ8 279 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-203ENST00000375315 IFFO2Q5TF58 517 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 TPTE2Q6XPS3 522 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 KCNB2Q92953 911 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 CCDC102AQ96A19 550 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 NLRP3Q96P20 1036 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 TAF6LQ9Y6J9 622 aa13.86□□□□□ -0.19
C9orf3-203ENST00000375315 A0A087WWV3 80 aa13.85□□□□□ -0.19
C9orf3-203ENST00000375315 FAM160A1Q05DH4 1040 aa13.85□□□□□ -0.19
C9orf3-203ENST00000375315 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-203ENST00000375315 PDE8BO95263 885 aa13.85□□□□□ -0.19
C9orf3-203ENST00000375315 GYG1P46976 350 aa13.85□□□□□ -0.19
C9orf3-203ENST00000375315 BPIFA3Q9BQP9 254 aa13.85□□□□□ -0.19
C9orf3-203ENST00000375315 TACO1Q9BSH4 297 aaKnown RBP13.85□□□□□ -0.19
C9orf3-203ENST00000375315 ABCF2Q9UG63 623 aa13.85□□□□□ -0.19
C9orf3-203ENST00000375315 CDHR2Q9BYE9 1310 aa13.85□□□□□ -0.19
C9orf3-203ENST00000375315 ABCC12Q96J65 1359 aa13.85□□□□□ -0.19
C9orf3-203ENST00000375315 VWA3AA6NCI4 1184 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 TTLL5Q6EMB2 1281 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 ANKRD18AQ8IVF6 992 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 GBP3Q9H0R5 595 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 CALRP27797 417 aaKnown RBP13.84□□□□□ -0.19
C9orf3-203ENST00000375315 EN1Q05925 392 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-203ENST00000375315 CHRNDQ07001 517 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 VPS37DQ86XT2 251 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 SDF4Q9BRK5 362 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 PPP2R2CQ9Y2T4 447 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 CNTNAP4Q9C0A0 1308 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 A0A0G2JLW4 131 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 ARHGAP6O43182 974 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 USP5P45974 858 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 TUBB4BP68371 445 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 CEBPZQ03701 1054 aaKnown RBP13.84□□□□□ -0.19
C9orf3-203ENST00000375315 EGFL6Q8IUX8 553 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 PLA2G12BQ9BX93 195 aa13.84□□□□□ -0.19
C9orf3-203ENST00000375315 RBM8AQ9Y5S9 174 aaKnown RBP13.84□□□□□ -0.19
C9orf3-203ENST00000375315 TJP1Q07157 1748 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.83□□□□□ -0.2
C9orf3-203ENST00000375315 N4BP1O75113 896 aaKnown RBP13.83□□□□□ -0.2
C9orf3-203ENST00000375315 PPFIA3O75145 1194 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 CBFA2T2O43439 604 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 HNRNPH1P31943 449 aaKnown RBP13.83□□□□□ -0.2
C9orf3-203ENST00000375315 MCAMP43121 646 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 HAND2P61296 217 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 BLOC1S2Q6QNY1 142 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 CLEC4GQ6UXB4 293 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 CNBD1Q8NA66 436 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 WDR24Q96S15 920 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 HAUS7Q99871 368 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 LRRC2Q9BYS8 371 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 GOLPH3LQ9H4A5 285 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 RCOR1Q9UKL0 485 aa13.83□□□□□ -0.2
C9orf3-203ENST00000375315 L1RE1Q9UN81 338 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms