RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 BIN1O00499 593 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 SERPINB10P48595 397 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 CUL4BQ13620 913 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 KRT71Q3SY84 523 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 CHMP7Q8WUX9 453 aaPredicted RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 OPTNQ96CV9 577 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 MMEP08473 750 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 STX17P56962 302 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 MTHFSP49914 203 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 PAPOLAP51003 745 aaKnown RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 TWISTNBQ3B726 338 aaPredicted RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 CBX8Q9HC52 389 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 BRD1O95696 1058 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 RAP1GDS1P52306 607 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 FNBP4Q8N3X1 1017 aaPredicted RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 CCDC89Q8N998 374 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 CALML4Q96GE6 196 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 NUTM2BA6NNL0 878 aaPredicted RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 NUTM2EB1AL46 878 aaPredicted RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 HIBCHQ6NVY1 386 aaPredicted RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 CCDC138Q96M89 665 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 TXNDC9O14530 226 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 DDI1Q8WTU0 396 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 FOXP2O15409 715 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 CORO7P57737 925 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 PSMD6Q15008 389 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 TTC22Q5TAA0 569 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 LRRC43Q8N309 656 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 GNA14O95837 355 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 CTNNA1P35221 906 aaKnown RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 CUL1Q13616 776 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 GID8Q9NWU2 228 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 INTS9Q9NV88 658 aaKnown RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 GAS8O95995 478 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 MAN1A1P33908 653 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 CLCN6P51797 869 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 PSME1Q06323 249 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 HS2ST1Q7LGA3 356 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 TYW1Q9NV66 732 aaKnown RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 A0A1B0GVL5 298 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 TSPAN9O75954 239 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 IGHDP01880 384 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 HDAC4P56524 1084 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 SH3GL2Q99962 352 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 DCTN3O75935 186 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 PECAM1P16284 738 aaPredicted RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 CCT6BQ92526 530 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 CD2APQ9Y5K6 639 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 STK24Q9Y6E0 443 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 STK3Q13188 491 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 ACRBPQ8NEB7 543 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 FERMT2Q96AC1 680 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 TADA3O75528 432 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 RAB14P61106 215 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 RIC3Q7Z5B4 369 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 ICA1Q05084 483 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 NR1H3Q13133 447 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 FLOT2Q14254 428 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 MSL3Q8N5Y2 521 aaKnown RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 PUS7Q96PZ0 661 aaKnown RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 RILPQ96NA2 401 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 TEKT2Q9UIF3 430 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 XPOTO43592 962 aaKnown RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 EXOSC9Q06265 439 aaKnown RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 ANO5Q75V66 913 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 CATIPQ7Z7H3 387 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 POLR3CQ9BUI4 534 aaPredicted RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 SLC24A3Q9HC58 644 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 GDPD2Q9HCC8 539 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 USP16Q9Y5T5 823 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 COPG1Q9Y678 874 aaKnown RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 A0A0G2JS52 829 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 FANCCQ00597 558 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 KIF6Q6ZMV9 814 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 SCYL3Q8IZE3 742 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 FRMD3A2A2Y4 597 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 AACSQ86V21 672 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 USP26Q9BXU7 913 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 CNPY2Q9Y2B0 182 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 TBKBP1A7MCY6 615 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 H0Y626 953 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 TRIM16O95361 564 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 MPP4Q96JB8 637 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 YIPF3Q9GZM5 350 aa7.32□□□□□ -1.24
UBR4-204ENST00000375254 ORC3Q9UBD5 711 aaPredicted RBP7.32□□□□□ -1.24
UBR4-204ENST00000375254 KRT3P12035 628 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 LMOD1P29536 600 aaPredicted RBP7.31□□□□□ -1.24
UBR4-204ENST00000375254 SERPINB6P35237 376 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 TCERG1LQ5VWI1 586 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 PRPF40BQ6NWY9 871 aaKnown RBP7.31□□□□□ -1.24
UBR4-204ENST00000375254 SART1O43290 800 aaKnown RBP7.31□□□□□ -1.24
UBR4-204ENST00000375254 AOPEPQ8N6M6 819 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 MEFVO15553 781 aaPredicted RBP7.31□□□□□ -1.24
UBR4-204ENST00000375254 DAB1O75553 588 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 PALM3A6NDB9 673 aaPredicted RBP7.31□□□□□ -1.24
UBR4-204ENST00000375254 TPP2P29144 1249 aaPredicted RBP7.31□□□□□ -1.24
UBR4-204ENST00000375254 ARHGAP22Q7Z5H3 698 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 MFN1Q8IWA4 741 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 IDEP14735 1019 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms