RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 CDK5RAP2Q96SN8 1893 aa22.62■■□□□ 1.21
NECAB3-202ENST00000375238 SH2B2O14492 632 aaPredicted RBP22.62■■□□□ 1.21
NECAB3-202ENST00000375238 GRIPAP1Q4V328 841 aa22.62■■□□□ 1.21
NECAB3-202ENST00000375238 FAM163AQ96GL9 167 aaPredicted RBP22.62■■□□□ 1.21
NECAB3-202ENST00000375238 MCM9Q9NXL9 1143 aa22.62■■□□□ 1.21
NECAB3-202ENST00000375238 TFIP11Q9UBB9 837 aaKnown RBP22.62■■□□□ 1.21
NECAB3-202ENST00000375238 GAKO14976 1311 aa22.61■■□□□ 1.21
NECAB3-202ENST00000375238 KIAA2012Q0VF49 1180 aa22.61■■□□□ 1.21
NECAB3-202ENST00000375238 KCNQ5Q9NR82 932 aa22.61■■□□□ 1.21
NECAB3-202ENST00000375238 TTF2Q9UNY4 1162 aaKnown RBP22.61■■□□□ 1.21
NECAB3-202ENST00000375238 SCN9AQ15858 1988 aa22.61■■□□□ 1.21
NECAB3-202ENST00000375238 GOLGA8BA8MQT2 603 aa22.61■■□□□ 1.21
NECAB3-202ENST00000375238 PLCG2P16885 1265 aa22.61■■□□□ 1.21
NECAB3-202ENST00000375238 SBK1Q52WX2 424 aa22.61■■□□□ 1.21
NECAB3-202ENST00000375238 TMEM67Q5HYA8 995 aa22.61■■□□□ 1.21
NECAB3-202ENST00000375238 RTKN2Q8IZC4 609 aa22.61■■□□□ 1.21
NECAB3-202ENST00000375238 TGFBRAP1Q8WUH2 860 aa22.61■■□□□ 1.21
NECAB3-202ENST00000375238 LEO1Q8WVC0 666 aaPredicted RBP22.61■■□□□ 1.21
NECAB3-202ENST00000375238 NCOA5Q9HCD5 579 aaKnown RBP22.61■■□□□ 1.21
NECAB3-202ENST00000375238 NOL7Q9UMY1 257 aaKnown RBP22.61■■□□□ 1.21
NECAB3-202ENST00000375238 IFIT3O14879 490 aaKnown RBP22.6■■□□□ 1.21
NECAB3-202ENST00000375238 PPIP5K2O43314 1243 aa22.6■■□□□ 1.21
NECAB3-202ENST00000375238 CYP2D6P10635 497 aa22.6■■□□□ 1.21
NECAB3-202ENST00000375238 TGFB2P61812 414 aa22.6■■□□□ 1.21
NECAB3-202ENST00000375238 IGDCC4Q8TDY8 1250 aa22.6■■□□□ 1.21
NECAB3-202ENST00000375238 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.6■■□□□ 1.21
NECAB3-202ENST00000375238 DAGLAQ9Y4D2 1042 aa22.6■■□□□ 1.21
NECAB3-202ENST00000375238 SLC3A2P08195 630 aaKnown RBP22.59■■□□□ 1.21
NECAB3-202ENST00000375238 USP17L8P0C7I0 530 aa22.59■■□□□ 1.21
NECAB3-202ENST00000375238 TEX11Q8IYF3 940 aa22.59■■□□□ 1.21
NECAB3-202ENST00000375238 ESR2Q92731 530 aa22.59■■□□□ 1.21
NECAB3-202ENST00000375238 CHMP4CQ96CF2 233 aa22.59■■□□□ 1.21
NECAB3-202ENST00000375238 SPATA32Q96LK8 384 aa22.59■■□□□ 1.21
NECAB3-202ENST00000375238 PTPDC1A2A3K4 754 aa22.59■■□□□ 1.21
NECAB3-202ENST00000375238 PCP11498 1178 aaKnown RBP22.59■■□□□ 1.21
NECAB3-202ENST00000375238 LIG1P18858 919 aa22.59■■□□□ 1.21
NECAB3-202ENST00000375238 EVX2Q03828 476 aa22.59■■□□□ 1.21
NECAB3-202ENST00000375238 SART3Q15020 963 aaKnown RBP22.59■■□□□ 1.21
NECAB3-202ENST00000375238 NFXL1Q6ZNB6 911 aa22.59■■□□□ 1.21
NECAB3-202ENST00000375238 ZSCAN16Q9H4T2 348 aaPredicted RBP22.59■■□□□ 1.21
NECAB3-202ENST00000375238 PIM2Q9P1W9 311 aa22.59■■□□□ 1.21
NECAB3-202ENST00000375238 PPP1R1BQ9UD71 204 aaPredicted RBP22.59■■□□□ 1.21
NECAB3-202ENST00000375238 MKRN1Q9UHC7 482 aaKnown RBP22.59■■□□□ 1.21
NECAB3-202ENST00000375238 H3BQV1 296 aa22.58■■□□□ 1.21
NECAB3-202ENST00000375238 HMGN5P82970 282 aaKnown RBP22.58■■□□□ 1.21
NECAB3-202ENST00000375238 SLC4A8Q2Y0W8 1093 aa22.58■■□□□ 1.21
NECAB3-202ENST00000375238 IFFO2Q5TF58 517 aa22.58■■□□□ 1.21
NECAB3-202ENST00000375238 STRIP1Q5VSL9 837 aa22.58■■□□□ 1.21
NECAB3-202ENST00000375238 RAB11FIP4Q86YS3 637 aa22.58■■□□□ 1.21
NECAB3-202ENST00000375238 MAPKAPK5Q8IW41 473 aa22.58■■□□□ 1.21
NECAB3-202ENST00000375238 AMOTL1Q8IY63 956 aa22.58■■□□□ 1.21
NECAB3-202ENST00000375238 ZKSCAN3Q9BRR0 538 aa22.58■■□□□ 1.21
NECAB3-202ENST00000375238 LY9Q9HBG7 655 aa22.58■■□□□ 1.21
NECAB3-202ENST00000375238 PSDA5PKW4 1024 aaPredicted RBP22.57■■□□□ 1.2
NECAB3-202ENST00000375238 PRDM1O75626 825 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 SCNN1DP51172 638 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 SENP2Q9HC62 589 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 HPS5Q9UPZ3 1129 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 ZNF646O15015 1829 aaPredicted RBP22.57■■□□□ 1.2
NECAB3-202ENST00000375238 ERICH2A1L162 156 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 USP17L3A6NCW0 530 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 USP17L4A6NCW7 530 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 RANBP6O60518 1105 aaKnown RBP22.57■■□□□ 1.2
NECAB3-202ENST00000375238 RHBDL3P58872 404 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 USP17L1Q7RTZ2 530 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 UBAC1Q9BSL1 405 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 ADAMTSL1Q8N6G6 1762 aa22.57■■□□□ 1.2
NECAB3-202ENST00000375238 MYH15Q9Y2K3 1946 aa22.56■■□□□ 1.2
NECAB3-202ENST00000375238 FGRP09769 529 aa22.56■■□□□ 1.2
NECAB3-202ENST00000375238 ADD1P35611 737 aaKnown RBP22.56■■□□□ 1.2
NECAB3-202ENST00000375238 LIFRP42702 1097 aa22.56■■□□□ 1.2
NECAB3-202ENST00000375238 DACT2Q5SW24 774 aa22.56■■□□□ 1.2
NECAB3-202ENST00000375238 PGBD1Q96JS3 809 aa22.56■■□□□ 1.2
NECAB3-202ENST00000375238 PSMD1Q99460 953 aa22.56■■□□□ 1.2
NECAB3-202ENST00000375238 MTA3Q9BTC8 594 aa22.56■■□□□ 1.2
NECAB3-202ENST00000375238 FOCADQ5VW36 1801 aa22.55■■□□□ 1.2
NECAB3-202ENST00000375238 FKBP1AP62942 108 aaKnown RBP22.55■■□□□ 1.2
NECAB3-202ENST00000375238 WTAPQ15007 396 aa22.55■■□□□ 1.2
NECAB3-202ENST00000375238 C12orf60Q5U649 245 aa22.55■■□□□ 1.2
NECAB3-202ENST00000375238 APOA5Q6Q788 366 aa22.55■■□□□ 1.2
NECAB3-202ENST00000375238 SGMS1Q86VZ5 419 aa22.55■■□□□ 1.2
NECAB3-202ENST00000375238 CCDC39Q9UFE4 941 aa22.55■■□□□ 1.2
NECAB3-202ENST00000375238 SAP30BPQ9UHR5 308 aaKnown RBP22.55■■□□□ 1.2
NECAB3-202ENST00000375238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.55■■□□□ 1.22e-6■■□□□ 12.1
NECAB3-202ENST00000375238 CCDC69A6NI79 296 aa22.55■■□□□ 1.2
NECAB3-202ENST00000375238 DHX16O60231 1041 aaKnown RBP22.55■■□□□ 1.2
NECAB3-202ENST00000375238 MSNP26038 577 aaKnown RBP22.55■■□□□ 1.2
NECAB3-202ENST00000375238 PDE4BQ07343 736 aa22.55■■□□□ 1.2
NECAB3-202ENST00000375238 SOGA3Q5TF21 947 aa22.55■■□□□ 1.2
NECAB3-202ENST00000375238 TEKT1Q969V4 418 aa22.55■■□□□ 1.2
NECAB3-202ENST00000375238 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.55■■□□□ 1.2
NECAB3-202ENST00000375238 MYH1P12882 1939 aa22.54■■□□□ 1.2
NECAB3-202ENST00000375238 ORC4O43929 436 aa22.54■■□□□ 1.2
NECAB3-202ENST00000375238 POLR3DP05423 398 aaPredicted RBP22.54■■□□□ 1.2
NECAB3-202ENST00000375238 HHIPL2Q6UWX4 724 aa22.54■■□□□ 1.2
NECAB3-202ENST00000375238 KIAA0825Q8IV33 1275 aa22.54■■□□□ 1.2
NECAB3-202ENST00000375238 FLT1P17948 1338 aa22.54■■□□□ 1.2
NECAB3-202ENST00000375238 DDX60LQ5H9U9 1706 aaKnown RBP22.53■■□□□ 1.2
NECAB3-202ENST00000375238 BRCA1P38398 1863 aaKnown RBP22.53■■□□□ 1.2
NECAB3-202ENST00000375238 METAP2P50579 478 aaKnown RBP eCLIP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms