RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 MASTLQ96GX5 879 aa20.98■□□□□ 0.95
HLA-DQB1-201ENST00000374943 ZKSCAN3Q9BRR0 538 aa20.98■□□□□ 0.95
HLA-DQB1-201ENST00000374943 RCOR1Q9UKL0 485 aa20.98■□□□□ 0.95
HLA-DQB1-201ENST00000374943 CCDC196A0A1B0GTZ2 297 aa20.97■□□□□ 0.95
HLA-DQB1-201ENST00000374943 SMIM22K7EJ46 135 aa20.97■□□□□ 0.95
HLA-DQB1-201ENST00000374943 IARSP41252 1262 aaKnown RBP20.97■□□□□ 0.95
HLA-DQB1-201ENST00000374943 NASPP49321 788 aaPredicted RBP20.97■□□□□ 0.95
HLA-DQB1-201ENST00000374943 RTN1Q16799 776 aa20.97■□□□□ 0.95
HLA-DQB1-201ENST00000374943 ZNF654Q8IZM8 581 aa20.97■□□□□ 0.95
HLA-DQB1-201ENST00000374943 ZSCAN10Q96SZ4 725 aaPredicted RBP20.97■□□□□ 0.95
HLA-DQB1-201ENST00000374943 NOL10Q9BSC4 688 aaKnown RBP20.97■□□□□ 0.95
HLA-DQB1-201ENST00000374943 MYL10Q9BUA6 226 aa20.97■□□□□ 0.95
HLA-DQB1-201ENST00000374943 RTFDC1Q9BY42 306 aaPredicted RBP20.97■□□□□ 0.95
HLA-DQB1-201ENST00000374943 C6orf229H3BNL8 230 aa20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 RANBP6O60518 1105 aaKnown RBP20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 FMNL1O95466 1100 aaPredicted RBP20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 EN1Q05925 392 aaPredicted RBP20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 IQCA1Q86XH1 822 aa20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 STK11IPQ8N1F8 1099 aa20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 FAM163AQ96GL9 167 aaPredicted RBP20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 ALG1Q9BT22 464 aa20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 COA1Q9GZY4 146 aa20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 RBSNQ9H1K0 784 aa20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 DIXDC1Q155Q3 683 aa20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 CCDC144CPQ8IYA2 1237 aa20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 ENAHQ8N8S7 591 aaPredicted RBP20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 SH3RF3Q8TEJ3 882 aaPredicted RBP20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 TSPY26PQ9H489 355 aa20.96■□□□□ 0.95
HLA-DQB1-201ENST00000374943 GPR75-ASB3A0A0A6YYF3 556 aa20.95■□□□□ 0.94
HLA-DQB1-201ENST00000374943 GOLGA6L4A6NEF3 574 aa20.95■□□□□ 0.94
HLA-DQB1-201ENST00000374943 KIF23Q02241 960 aaPredicted RBP20.95■□□□□ 0.94
HLA-DQB1-201ENST00000374943 SSRP1Q08945 709 aaKnown RBP20.95■□□□□ 0.94
HLA-DQB1-201ENST00000374943 SLF2Q8IX21 1173 aa20.95■□□□□ 0.94
HLA-DQB1-201ENST00000374943 WASF1Q92558 559 aa20.95■□□□□ 0.94
HLA-DQB1-201ENST00000374943 PGBD1Q96JS3 809 aa20.95■□□□□ 0.94
HLA-DQB1-201ENST00000374943 USP28Q96RU2 1077 aa20.95■□□□□ 0.94
HLA-DQB1-201ENST00000374943 ZNF646O15015 1829 aaPredicted RBP20.95■□□□□ 0.94
HLA-DQB1-201ENST00000374943 SLX4Q8IY92 1834 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 GAKO14976 1311 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 PDE4BQ07343 736 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 C12orf60Q5U649 245 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 OTUD7BQ6GQQ9 843 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 MPNDQ8N594 471 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 FANCBQ8NB91 859 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 PHKBQ93100 1093 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 CAMKK2Q96RR4 588 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 MCM9Q9NXL9 1143 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 SUGT1Q9Y2Z0 365 aa20.94■□□□□ 0.94
HLA-DQB1-201ENST00000374943 CYP2D6P10635 497 aa20.93■□□□□ 0.94
HLA-DQB1-201ENST00000374943 PLCG2P16885 1265 aa20.93■□□□□ 0.94
HLA-DQB1-201ENST00000374943 USP5P45974 858 aa20.93■□□□□ 0.94
HLA-DQB1-201ENST00000374943 MFSD14BQ5SR56 506 aa20.93■□□□□ 0.94
HLA-DQB1-201ENST00000374943 RTEL1Q9NZ71 1219 aa20.93■□□□□ 0.94
HLA-DQB1-201ENST00000374943 LIG1P18858 919 aa20.93■□□□□ 0.94
HLA-DQB1-201ENST00000374943 SLC15A2Q16348 729 aa20.93■□□□□ 0.94
HLA-DQB1-201ENST00000374943 IFIT1BQ5T764 474 aaKnown RBP20.93■□□□□ 0.94
HLA-DQB1-201ENST00000374943 NBPF11Q86T75 865 aa20.93■□□□□ 0.94
HLA-DQB1-201ENST00000374943 DDX19AQ9NUU7 478 aaKnown RBP20.93■□□□□ 0.94
HLA-DQB1-201ENST00000374943 PRDM1O75626 825 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 DDAH1O94760 285 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 CALM1P0DP23 149 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 CALM2P0DP24 149 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 CALM3P0DP25 149 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 BTDP43251 543 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 MYSM1Q5VVJ2 828 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 MSL1Q68DK7 614 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 KRT40Q6A162 431 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 STYK1Q6J9G0 422 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 TRIM22Q8IYM9 498 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 SLC26A6Q9BXS9 759 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 ANO8Q9HCE9 1232 aaPredicted RBP20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 POLR3EQ9NVU0 708 aa20.92■□□□□ 0.94
HLA-DQB1-201ENST00000374943 MYH8P13535 1937 aa20.91■□□□□ 0.94
HLA-DQB1-201ENST00000374943 USP17L8P0C7I0 530 aa20.91■□□□□ 0.94
HLA-DQB1-201ENST00000374943 EVX2Q03828 476 aa20.91■□□□□ 0.94
HLA-DQB1-201ENST00000374943 DPP8Q6V1X1 898 aaPredicted RBP20.91■□□□□ 0.94
HLA-DQB1-201ENST00000374943 CATIPQ7Z7H3 387 aa20.91■□□□□ 0.94
HLA-DQB1-201ENST00000374943 AMOTL1Q8IY63 956 aa20.91■□□□□ 0.94
HLA-DQB1-201ENST00000374943 CRACR2BQ8N4Y2 399 aaPredicted RBP20.91■□□□□ 0.94
HLA-DQB1-201ENST00000374943 AIFM3Q96NN9 605 aa20.91■□□□□ 0.94
HLA-DQB1-201ENST00000374943 GJB4Q9NTQ9 266 aa20.91■□□□□ 0.94
HLA-DQB1-201ENST00000374943 KIF28PB7ZC32 967 aa20.9■□□□□ 0.94
HLA-DQB1-201ENST00000374943 YEATS4O95619 227 aa20.9■□□□□ 0.94
HLA-DQB1-201ENST00000374943 TRIM29Q14134 588 aa20.9■□□□□ 0.94
HLA-DQB1-201ENST00000374943 FUCA2Q9BTY2 467 aa20.9■□□□□ 0.94
HLA-DQB1-201ENST00000374943 ZC3H12CQ9C0D7 883 aaKnown RBP20.9■□□□□ 0.94
HLA-DQB1-201ENST00000374943 TMX4Q9H1E5 349 aaPredicted RBP20.9■□□□□ 0.94
HLA-DQB1-201ENST00000374943 RBM28Q9NW13 759 aaKnown RBP20.9■□□□□ 0.94
HLA-DQB1-201ENST00000374943 STK32BQ9NY57 414 aa20.9■□□□□ 0.94
HLA-DQB1-201ENST00000374943 DEXIO95424 95 aa20.89■□□□□ 0.94
HLA-DQB1-201ENST00000374943 R3HDM1Q15032 1099 aaKnown RBP20.89■□□□□ 0.94
HLA-DQB1-201ENST00000374943 EZH2Q15910 746 aaKnown RBP20.89■□□□□ 0.94
HLA-DQB1-201ENST00000374943 RNF26Q9BY78 433 aaPredicted RBP20.89■□□□□ 0.94
HLA-DQB1-201ENST00000374943 FTOQ9C0B1 505 aaKnown RBP eCLIP20.89■□□□□ 0.94
HLA-DQB1-201ENST00000374943 NUP62CLQ9H1M0 184 aa20.89■□□□□ 0.94
HLA-DQB1-201ENST00000374943 U2AF2P26368 475 aaKnown RBP eCLIP20.89■□□□□ 0.93
HLA-DQB1-201ENST00000374943 CCDC173Q0VFZ6 552 aa20.89■□□□□ 0.93
HLA-DQB1-201ENST00000374943 TROAPQ12815 778 aa20.89■□□□□ 0.93
HLA-DQB1-201ENST00000374943 TPRNQ4KMQ1 711 aa20.89■□□□□ 0.93
HLA-DQB1-201ENST00000374943 C2CD5Q86YS7 1000 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms