RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 GABPAQ06546 454 aa20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 NBPF9Q3BBW0 867 aa20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 C16orf86Q6ZW13 317 aa20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 TTC6Q86TZ1 520 aa20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 FAM83AQ86UY5 434 aa20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 IPO9Q96P70 1041 aaKnown RBP20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 MTA3Q9BTC8 594 aa20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 CLRN2A0PK11 232 aa20.35■□□□□ 0.85
HLA-DMA-201ENST00000374843 B4E1Z4 1266 aa20.35■□□□□ 0.85
HLA-DMA-201ENST00000374843 DDNO94850 711 aaPredicted RBP20.35■□□□□ 0.85
HLA-DMA-201ENST00000374843 AK2P54819 239 aa20.35■□□□□ 0.85
HLA-DMA-201ENST00000374843 PDE4BQ07343 736 aa20.35■□□□□ 0.85
HLA-DMA-201ENST00000374843 SAMD7Q7Z3H4 446 aa20.35■□□□□ 0.85
HLA-DMA-201ENST00000374843 WDR90Q96KV7 1748 aa20.35■□□□□ 0.85
HLA-DMA-201ENST00000374843 K7ELQ4 463 aaPredicted RBP20.34■□□□□ 0.85
HLA-DMA-201ENST00000374843 HLA-DOAP06340 250 aa20.34■□□□□ 0.85
HLA-DMA-201ENST00000374843 ANKRD1Q15327 319 aa20.34■□□□□ 0.85
HLA-DMA-201ENST00000374843 SH3BP5LQ7L8J4 393 aa20.34■□□□□ 0.85
HLA-DMA-201ENST00000374843 METTL16Q86W50 562 aaKnown RBP20.34■□□□□ 0.85
HLA-DMA-201ENST00000374843 ZFPM1Q8IX07 1006 aa20.34■□□□□ 0.85
HLA-DMA-201ENST00000374843 NKX2-3Q8TAU0 364 aa20.34■□□□□ 0.85
HLA-DMA-201ENST00000374843 FAM151AQ8WW52 585 aa20.34■□□□□ 0.85
HLA-DMA-201ENST00000374843 ESR2Q92731 530 aa20.34■□□□□ 0.85
HLA-DMA-201ENST00000374843 INCENPQ9NQS7 918 aa20.34■□□□□ 0.85
HLA-DMA-201ENST00000374843 PRC1O43663 620 aa20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 LMOD1P29536 600 aaPredicted RBP20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 TOB2Q14106 344 aaPredicted RBP20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 TBC1D10BQ4KMP7 808 aaPredicted RBP20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 DPY19L2Q6NUT2 758 aa20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 CYB5R4Q7L1T6 521 aa20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 TRPM4Q8TD43 1214 aa20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 DYNLL2Q96FJ2 89 aa20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 ZNF287Q9HBT7 754 aa20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 ADARB2Q9NS39 739 aaKnown RBP20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 SWAP70Q9UH65 585 aa20.33■□□□□ 0.85
HLA-DMA-201ENST00000374843 PLIN4Q96Q06 1357 aa20.33■□□□□ 0.84
HLA-DMA-201ENST00000374843 GLTPD2A6NH11 291 aa20.32■□□□□ 0.84
HLA-DMA-201ENST00000374843 KDM4AO75164 1064 aa20.32■□□□□ 0.84
HLA-DMA-201ENST00000374843 TCP10Q12799 353 aa20.32■□□□□ 0.84
HLA-DMA-201ENST00000374843 TNFAIP1Q13829 316 aa20.32■□□□□ 0.84
HLA-DMA-201ENST00000374843 TMEM87BQ96K49 555 aa20.32■□□□□ 0.84
HLA-DMA-201ENST00000374843 TCEANC2Q96MN5 208 aa20.32■□□□□ 0.84
HLA-DMA-201ENST00000374843 VEZTQ9HBM0 779 aa20.32■□□□□ 0.84
HLA-DMA-201ENST00000374843 SERPINB13Q9UIV8 391 aa20.32■□□□□ 0.84
HLA-DMA-201ENST00000374843 SCN4AP35499 1836 aa20.32■□□□□ 0.84
HLA-DMA-201ENST00000374843 DDTLA6NHG4 134 aaPredicted RBP20.31■□□□□ 0.84
HLA-DMA-201ENST00000374843 TCP10L2B9ZVM9 353 aa20.31■□□□□ 0.84
HLA-DMA-201ENST00000374843 EPS15P42566 896 aa20.31■□□□□ 0.84
HLA-DMA-201ENST00000374843 SLC4A8Q2Y0W8 1093 aa20.31■□□□□ 0.84
HLA-DMA-201ENST00000374843 Q6ZUG5 572 aa20.31■□□□□ 0.84
HLA-DMA-201ENST00000374843 SLC44A5Q8NCS7 719 aa20.31■□□□□ 0.84
HLA-DMA-201ENST00000374843 ZSWIM5Q9P217 1185 aa20.31■□□□□ 0.84
HLA-DMA-201ENST00000374843 PI4KBQ9UBF8 816 aa20.31■□□□□ 0.84
HLA-DMA-201ENST00000374843 PGAP2Q9UHJ9 254 aa20.31■□□□□ 0.84
HLA-DMA-201ENST00000374843 LIMCH1Q9UPQ0 1083 aa20.31■□□□□ 0.84
HLA-DMA-201ENST00000374843 PITPNM2Q9BZ72 1349 aa20.3■□□□□ 0.84
HLA-DMA-201ENST00000374843 SH2B2O14492 632 aaPredicted RBP20.3■□□□□ 0.84
HLA-DMA-201ENST00000374843 RASA1P20936 1047 aa20.3■□□□□ 0.84
HLA-DMA-201ENST00000374843 TNNI2P48788 182 aa20.3■□□□□ 0.84
HLA-DMA-201ENST00000374843 CDK8P49336 464 aa20.3■□□□□ 0.84
HLA-DMA-201ENST00000374843 EVCP57679 992 aa20.3■□□□□ 0.84
HLA-DMA-201ENST00000374843 RRP12Q5JTH9 1297 aaKnown RBP20.3■□□□□ 0.84
HLA-DMA-201ENST00000374843 APOBEC3FQ8IUX4 373 aaKnown RBP20.3■□□□□ 0.84
HLA-DMA-201ENST00000374843 GREB1LQ9C091 1923 aaPredicted RBP20.29■□□□□ 0.84
HLA-DMA-201ENST00000374843 PRDM1O75626 825 aa20.29■□□□□ 0.84
HLA-DMA-201ENST00000374843 SHMT1P34896 483 aa20.29■□□□□ 0.84
HLA-DMA-201ENST00000374843 HIRAP54198 1017 aaPredicted RBP20.29■□□□□ 0.84
HLA-DMA-201ENST00000374843 RBM26Q5T8P6 1007 aaKnown RBP20.29■□□□□ 0.84
HLA-DMA-201ENST00000374843 DNAJC18Q9H819 358 aa20.29■□□□□ 0.84
HLA-DMA-201ENST00000374843 TOMM22Q9NS69 142 aa20.29■□□□□ 0.84
HLA-DMA-201ENST00000374843 HACL1Q9UJ83 578 aa20.29■□□□□ 0.84
HLA-DMA-201ENST00000374843 ANGEL1Q9UNK9 670 aaKnown RBP20.29■□□□□ 0.84
HLA-DMA-201ENST00000374843 ASTN2O75129 1339 aaPredicted RBP20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 LIFRP42702 1097 aa20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 CUL4AQ13619 759 aa20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 CHST3Q7LGC8 479 aa20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 SGMS1Q86VZ5 419 aa20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 FOXP4Q8IVH2 680 aaPredicted RBP20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 STK11IPQ8N1F8 1099 aa20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 IGDCC4Q8TDY8 1250 aa20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 TMX3Q96JJ7 454 aa20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 ZSCAN31Q96LW9 406 aaPredicted RBP20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 CSRNP1Q96S65 589 aa20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 LRRC2Q9BYS8 371 aa20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 SH2B1Q9NRF2 756 aaPredicted RBP20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 HERC5Q9UII4 1024 aaKnown RBP20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 TPCN1Q9ULQ1 816 aa20.28■□□□□ 0.84
HLA-DMA-201ENST00000374843 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 SART3Q15020 963 aaKnown RBP20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 SEC23AQ15436 765 aa20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 ZSCAN29Q8IWY8 852 aaPredicted RBP20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 BRF1Q92994 677 aa20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 TEPSINQ96N21 525 aa20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 LY9Q9HBG7 655 aa20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 MKNK2Q9HBH9 465 aa20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 TCP11L1Q9NUJ3 509 aa20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 PPP2R3BQ9Y5P8 575 aa20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 MYH8P13535 1937 aa20.27■□□□□ 0.84
HLA-DMA-201ENST00000374843 NID2Q14112 1375 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 IQCA1LA6NCM1 817 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms