RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 UFL1O94874 794 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 PDE6BP35913 854 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 SNW1Q13573 536 aaKnown RBP14.66□□□□□ -0.06
PRPF4-202ENST00000374199 WTAPQ15007 396 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 IFFO2Q5TF58 517 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 SLC12A7Q9Y666 1083 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 TNKSO95271 1327 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 NCLP19338 710 aaKnown RBP14.66□□□□□ -0.06
PRPF4-202ENST00000374199 RCSD1Q6JBY9 416 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 CRACR2BQ8N4Y2 399 aaPredicted RBP14.66□□□□□ -0.06
PRPF4-202ENST00000374199 C7orf43Q8WVR3 580 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 SHISA4Q96DD7 197 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 USP28Q96RU2 1077 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 AATFQ9NY61 560 aaKnown RBP eCLIP14.66□□□□□ -0.06
PRPF4-202ENST00000374199 SART3Q15020 963 aaKnown RBP14.66□□□□□ -0.06
PRPF4-202ENST00000374199 ZNF654Q8IZM8 581 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 LINC00301Q8NCQ3 95 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 MASTLQ96GX5 879 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 C8orf76Q96K31 380 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 USP17L12C9JPN9 530 aa14.65□□□□□ -0.06
PRPF4-202ENST00000374199 USP17L21D6R901 530 aa14.65□□□□□ -0.06
PRPF4-202ENST00000374199 LIG1P18858 919 aa14.65□□□□□ -0.06
PRPF4-202ENST00000374199 EVX2Q03828 476 aa14.65□□□□□ -0.06
PRPF4-202ENST00000374199 FANCBQ8NB91 859 aa14.65□□□□□ -0.06
PRPF4-202ENST00000374199 ZNF396Q96N95 335 aaPredicted RBP14.65□□□□□ -0.06
PRPF4-202ENST00000374199 MRIQ9BWK5 157 aa14.65□□□□□ -0.06
PRPF4-202ENST00000374199 CLSTN2Q9H4D0 955 aa14.65□□□□□ -0.06
PRPF4-202ENST00000374199 ALDH1B1P30837 517 aa14.65□□□□□ -0.06
PRPF4-202ENST00000374199 UVSSAQ2YD98 709 aa14.65□□□□□ -0.06
PRPF4-202ENST00000374199 RNF26Q9BY78 433 aaPredicted RBP14.65□□□□□ -0.06
PRPF4-202ENST00000374199 DDX19AQ9NUU7 478 aaKnown RBP14.65□□□□□ -0.06
PRPF4-202ENST00000374199 GOLGA8AA7E2F4 631 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 MYSM1Q5VVJ2 828 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 SH3RF3Q8TEJ3 882 aaPredicted RBP14.64□□□□□ -0.07
PRPF4-202ENST00000374199 TSPY26PQ9H489 355 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 COL2A1P02458 1487 aaPredicted RBP14.64□□□□□ -0.07
PRPF4-202ENST00000374199 CCDC173Q0VFZ6 552 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 PTPAQ15257 358 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 PKN1Q16512 942 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 TAOK2Q9UL54 1235 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 CYP2D7A0A087X1C5 515 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 CCDC196A0A1B0GTZ2 297 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 CCDC69A6NI79 296 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 CALM1P0DP23 149 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 CALM2P0DP24 149 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 CALM3P0DP25 149 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 POTEAQ6S8J7 498 aa14.64□□□□□ -0.07
PRPF4-202ENST00000374199 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.64□□□□□ -0.07
PRPF4-202ENST00000374199 RBM28Q9NW13 759 aaKnown RBP14.64□□□□□ -0.07
PRPF4-202ENST00000374199 LDHCP07864 332 aa14.63□□□□□ -0.07
PRPF4-202ENST00000374199 FOXD4L6Q3SYB3 417 aaPredicted RBP14.63□□□□□ -0.07
PRPF4-202ENST00000374199 FOXD4L3Q6VB84 417 aaPredicted RBP14.63□□□□□ -0.07
PRPF4-202ENST00000374199 DZIP1Q86YF9 867 aaKnown RBP14.63□□□□□ -0.07
PRPF4-202ENST00000374199 WASF1Q92558 559 aa14.63□□□□□ -0.07
PRPF4-202ENST00000374199 ANO8Q9HCE9 1232 aaPredicted RBP14.63□□□□□ -0.07
PRPF4-202ENST00000374199 PRPF3O43395 683 aaKnown RBP14.63□□□□□ -0.07
PRPF4-202ENST00000374199 RTN1Q16799 776 aa14.63□□□□□ -0.07
PRPF4-202ENST00000374199 AXDND1Q5T1B0 1012 aaPredicted RBP14.63□□□□□ -0.07
PRPF4-202ENST00000374199 KRT40Q6A162 431 aa14.63□□□□□ -0.07
PRPF4-202ENST00000374199 GPR101Q96P66 508 aaPredicted RBP14.63□□□□□ -0.07
PRPF4-202ENST00000374199 ARFGEF1Q9Y6D6 1849 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 MMP1P03956 469 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 MMP10P09238 476 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 ADALQ6DHV7 355 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 C16orf86Q6ZW13 317 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 MICU3Q86XE3 530 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 DGKHQ86XP1 1220 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 ALG1Q9BT22 464 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 FOXP1Q9H334 677 aaPredicted RBP14.62□□□□□ -0.07
PRPF4-202ENST00000374199 IL17RBQ9NRM6 502 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 DEXIO95424 95 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 IARSP41252 1262 aaKnown RBP14.62□□□□□ -0.07
PRPF4-202ENST00000374199 NPY5RQ15761 445 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 SLC15A2Q16348 729 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 HS1BP3Q53T59 392 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 FAM177A1Q8N128 213 aaPredicted RBP14.62□□□□□ -0.07
PRPF4-202ENST00000374199 TNFRSF25Q93038 417 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 GOLPH3LQ9H4A5 285 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 TFIP11Q9UBB9 837 aaKnown RBP14.62□□□□□ -0.07
PRPF4-202ENST00000374199 MYO3BQ8WXR4 1341 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 CNTNAP5Q8WYK1 1306 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 CPLX1O14810 134 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 PPP6R2O75170 966 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 BAG3O95817 575 aa14.62□□□□□ -0.07
PRPF4-202ENST00000374199 CHAF1AQ13111 956 aaPredicted RBP14.62□□□□□ -0.07
PRPF4-202ENST00000374199 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.62□□□□□ -0.07
PRPF4-202ENST00000374199 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
PRPF4-202ENST00000374199 CYP2D6P10635 497 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 PLCG2P16885 1265 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 SSRP1Q08945 709 aaKnown RBP14.61□□□□□ -0.07
PRPF4-202ENST00000374199 CPLX2Q6PUV4 134 aaKnown RBP14.61□□□□□ -0.07
PRPF4-202ENST00000374199 TMTC3Q6ZXV5 915 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 FMR1NBQ8N0W7 255 aaPredicted RBP14.61□□□□□ -0.07
PRPF4-202ENST00000374199 CERS5Q8N5B7 392 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 KCNG4Q8TDN1 519 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 AIFM3Q96NN9 605 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 FTOQ9C0B1 505 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRPF4-202ENST00000374199 FLT1P17948 1338 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 GUCY1A2P33402 732 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 GABPAQ06546 454 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms