RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 APLP1P51693 650 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 ZC3H6P61129 1189 aaKnown RBP9.37□□□□□ -0.91
GARNL3-201ENST00000373386 GPS2Q13227 327 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 ACBD5Q5T8D3 534 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-201ENST00000373386 TAF4BQ92750 862 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 LCMT1Q9UIC8 334 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 WDR19Q8NEZ3 1342 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 PLCH1Q4KWH8 1693 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 ANKRD36CQ5JPF3 1778 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 A0A087WZG4 1122 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 KCNA2P16389 499 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 PTGS1P23219 599 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 HDLBPQ00341 1268 aaKnown RBP9.36□□□□□ -0.91
GARNL3-201ENST00000373386 ATG9AQ7Z3C6 839 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 TRIM7Q9C029 511 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 CLSTN2Q9H4D0 955 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 JADE2Q9NQC1 790 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 FAM53CQ9NYF3 392 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 CFAP45Q9UL16 551 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 TOGARAM1Q9Y4F4 1720 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 AP1G2O75843 785 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 BDNFP23560 247 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 ZMYM1Q5SVZ6 1142 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 LMOD2Q6P5Q4 547 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 CCDC82Q8N4S0 544 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 CBX8Q9HC52 389 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 NHSL1Q5SYE7 1610 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 MYH7P12883 1935 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 CBFA2T2O43439 604 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 EXOSC10Q01780 885 aaKnown RBP9.36□□□□□ -0.91
GARNL3-201ENST00000373386 DBN1Q16643 649 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 ANO6Q4KMQ2 910 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 DHX32Q7L7V1 743 aaKnown RBP9.36□□□□□ -0.91
GARNL3-201ENST00000373386 UBE3BQ7Z3V4 1068 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 LUZP1Q86V48 1076 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 STAG2Q8N3U4 1231 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 DACT1Q9NYF0 836 aa9.36□□□□□ -0.91
GARNL3-201ENST00000373386 ARAP2Q8WZ64 1704 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 SALL1Q9NSC2 1324 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 SMTNL1A8MU46 457 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 TPPPO94811 219 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 FMNL1O95466 1100 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-201ENST00000373386 CPP00450 1065 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 ZFYP08048 801 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-201ENST00000373386 TPP2P29144 1249 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-201ENST00000373386 GJA8P48165 433 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 ZNF75DP51815 510 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 SLC7A5Q01650 507 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 RESTQ13127 1097 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 PLA2G4DQ86XP0 818 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 AMOTL1Q8IY63 956 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 DRC7Q8IY82 874 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 ZNF274Q96GC6 653 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-201ENST00000373386 SIL1Q9H173 461 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 ITM2BQ9Y287 266 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 SOS2Q07890 1332 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-201ENST00000373386 CICQ96RK0 1608 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-201ENST00000373386 EYA2O00167 538 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 GCFC2P16383 781 aaKnown RBP9.35□□□□□ -0.91
GARNL3-201ENST00000373386 CDC25BP30305 580 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 CAMK4Q16566 473 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 FERMT3Q86UX7 667 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 MRFAP1L1Q96HT8 127 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 ZNF512BQ96KM6 892 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-201ENST00000373386 PAG1Q9NWQ8 432 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 COMMD10Q9Y6G5 202 aa9.35□□□□□ -0.91
GARNL3-201ENST00000373386 NBPF26B4DH59 902 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 ZSCAN9O15535 394 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-201ENST00000373386 CYP21A2P08686 494 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 ZNF24P17028 368 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 NCBP1Q09161 790 aaKnown RBP9.34□□□□□ -0.91
GARNL3-201ENST00000373386 NBPF14Q5TI25 921 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 ANKRD13BQ86YJ7 626 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 NBPF15Q8N660 670 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 LEO1Q8WVC0 666 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-201ENST00000373386 DBNDD2Q9BQY9 259 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 ISCA1Q9BUE6 129 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 TRIM5Q9C035 493 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 ATRNO75882 1429 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 LRP5O75197 1615 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 STIP1P31948 543 aaKnown RBP9.34□□□□□ -0.91
GARNL3-201ENST00000373386 ELF1P32519 619 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 TMED1Q13445 227 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 AKNAD1Q5T1N1 836 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 SOGA3Q5TF21 947 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 CKAP2LQ8IYA6 745 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 LMCD1Q9NZU5 365 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 NRBP1Q9UHY1 535 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 CHMP3Q9Y3E7 222 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 LTBP4Q8N2S1 1624 aa9.34□□□□□ -0.91
GARNL3-201ENST00000373386 RBM6P78332 1123 aaKnown RBP9.34□□□□□ -0.92
GARNL3-201ENST00000373386 MECOMQ03112 1051 aa9.34□□□□□ -0.92
GARNL3-201ENST00000373386 ZRSR1Q15695 479 aaKnown RBP9.34□□□□□ -0.92
GARNL3-201ENST00000373386 LMBR1LQ6UX01 489 aa9.34□□□□□ -0.92
GARNL3-201ENST00000373386 SYNE3Q6ZMZ3 975 aa9.34□□□□□ -0.92
GARNL3-201ENST00000373386 GOLGA5Q8TBA6 731 aa9.34□□□□□ -0.92
GARNL3-201ENST00000373386 KLHDC4Q8TBB5 520 aa9.34□□□□□ -0.92
GARNL3-201ENST00000373386 BICD2Q8TD16 824 aa9.34□□□□□ -0.92
GARNL3-201ENST00000373386 DDX54Q8TDD1 881 aaKnown RBP9.34□□□□□ -0.92
GARNL3-201ENST00000373386 BAG1Q99933 345 aaPredicted RBP9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms