RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 AMOTL1Q8IY63 956 aa19.48■□□□□ 0.71
TMEM53-203ENST00000372242 C2orf69Q8N8R5 385 aa19.48■□□□□ 0.71
TMEM53-203ENST00000372242 HOOK2Q96ED9 719 aa19.48■□□□□ 0.71
TMEM53-203ENST00000372242 DYNLL2Q96FJ2 89 aa19.48■□□□□ 0.71
TMEM53-203ENST00000372242 DSCC1Q9BVC3 393 aa19.48■□□□□ 0.71
TMEM53-203ENST00000372242 DNAJC18Q9H819 358 aa19.48■□□□□ 0.71
TMEM53-203ENST00000372242 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.48■□□□□ 0.71
TMEM53-203ENST00000372242 SERPINB13Q9UIV8 391 aa19.48■□□□□ 0.71
TMEM53-203ENST00000372242 UBE2Q2LH0YL09 131 aa19.48■□□□□ 0.71
TMEM53-203ENST00000372242 DCAF15Q66K64 600 aa19.48■□□□□ 0.71
TMEM53-203ENST00000372242 ANO2Q9NQ90 1003 aa19.48■□□□□ 0.71
TMEM53-203ENST00000372242 TMEM88BA6NKF7 163 aa19.47■□□□□ 0.71
TMEM53-203ENST00000372242 APLP1P51693 650 aa19.47■□□□□ 0.71
TMEM53-203ENST00000372242 MAP3K10Q02779 954 aa19.47■□□□□ 0.71
TMEM53-203ENST00000372242 KIAA1211Q6ZU35 1233 aa19.47■□□□□ 0.71
TMEM53-203ENST00000372242 FOXP4Q8IVH2 680 aaPredicted RBP19.47■□□□□ 0.71
TMEM53-203ENST00000372242 SLC44A5Q8NCS7 719 aa19.47■□□□□ 0.71
TMEM53-203ENST00000372242 TRIM34Q9BYJ4 488 aa19.47■□□□□ 0.71
TMEM53-203ENST00000372242 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.47■□□□□ 0.71
TMEM53-203ENST00000372242 METTL16Q86W50 562 aaKnown RBP19.46■□□□□ 0.71
TMEM53-203ENST00000372242 KLRG1Q96E93 195 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 WRNIP1Q96S55 665 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 ZNF341Q9BYN7 854 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 LSG1Q9H089 658 aaKnown RBP19.46■□□□□ 0.71
TMEM53-203ENST00000372242 EHD4Q9H223 541 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 HERC5Q9UII4 1024 aaKnown RBP19.46■□□□□ 0.71
TMEM53-203ENST00000372242 PAPPA2Q9BXP8 1791 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 TBC1D12O60347 775 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 HAND2P61296 217 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 CTDSPL2Q05D32 466 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 GABPAQ06546 454 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 PPARAQ07869 468 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 ARMC9Q7Z3E5 817 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 LAMB1P07942 1786 aa19.46■□□□□ 0.71
TMEM53-203ENST00000372242 PHF20L1A8MW92 1017 aa19.45■□□□□ 0.7
TMEM53-203ENST00000372242 INPP5BP32019 993 aa19.45■□□□□ 0.7
TMEM53-203ENST00000372242 IREB2P48200 963 aaKnown RBP19.45■□□□□ 0.7
TMEM53-203ENST00000372242 MAP4K1Q92918 833 aa19.45■□□□□ 0.7
TMEM53-203ENST00000372242 ZKSCAN4Q969J2 545 aaPredicted RBP19.45■□□□□ 0.7
TMEM53-203ENST00000372242 ABT1Q9ULW3 272 aaKnown RBP19.45■□□□□ 0.7
TMEM53-203ENST00000372242 FKBP1BP68106 108 aa19.44■□□□□ 0.7
TMEM53-203ENST00000372242 HTRA3P83110 453 aa19.44■□□□□ 0.7
TMEM53-203ENST00000372242 RRP1BQ14684 758 aaKnown RBP19.44■□□□□ 0.7
TMEM53-203ENST00000372242 SAPCD2Q86UD0 394 aa19.44■□□□□ 0.7
TMEM53-203ENST00000372242 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.44■□□□□ 0.7
TMEM53-203ENST00000372242 ZMYM6O95789 1325 aa19.44■□□□□ 0.7
TMEM53-203ENST00000372242 SHMT1P34896 483 aa19.44■□□□□ 0.7
TMEM53-203ENST00000372242 HUNKP57058 714 aa19.44■□□□□ 0.7
TMEM53-203ENST00000372242 MAP3K11Q16584 847 aa19.44■□□□□ 0.7
TMEM53-203ENST00000372242 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.44■□□□□ 0.7
TMEM53-203ENST00000372242 CLMNQ96JQ2 1002 aa19.44■□□□□ 0.7
TMEM53-203ENST00000372242 INCENPQ9NQS7 918 aa19.44■□□□□ 0.7
TMEM53-203ENST00000372242 ZNF112Q9UJU3 913 aa19.44■□□□□ 0.7
TMEM53-203ENST00000372242 OTOFQ9HC10 1997 aa19.43■□□□□ 0.7
TMEM53-203ENST00000372242 CDK8P49336 464 aa19.43■□□□□ 0.7
TMEM53-203ENST00000372242 C16orf86Q6ZW13 317 aa19.43■□□□□ 0.7
TMEM53-203ENST00000372242 CTNNA3Q9UI47 895 aa19.43■□□□□ 0.7
TMEM53-203ENST00000372242 RBM8AQ9Y5S9 174 aaKnown RBP19.43■□□□□ 0.7
TMEM53-203ENST00000372242 TLL2Q9Y6L7 1015 aa19.43■□□□□ 0.7
TMEM53-203ENST00000372242 PRDM1O75626 825 aa19.42■□□□□ 0.7
TMEM53-203ENST00000372242 SHROOM1Q2M3G4 852 aaPredicted RBP19.42■□□□□ 0.7
TMEM53-203ENST00000372242 LDLRAD1Q5T700 205 aa19.42■□□□□ 0.7
TMEM53-203ENST00000372242 NBPF3Q9H094 633 aa19.42■□□□□ 0.7
TMEM53-203ENST00000372242 CREBZFQ9NS37 354 aa19.42■□□□□ 0.7
TMEM53-203ENST00000372242 TACC3Q9Y6A5 838 aa19.42■□□□□ 0.7
TMEM53-203ENST00000372242 U3KPZ7 1027 aaPredicted RBP19.42■□□□□ 0.7
TMEM53-203ENST00000372242 ROBO3Q96MS0 1386 aa19.42■□□□□ 0.7
TMEM53-203ENST00000372242 ZNF213O14771 459 aa19.41■□□□□ 0.7
TMEM53-203ENST00000372242 JAG1P78504 1218 aa19.41■□□□□ 0.7
TMEM53-203ENST00000372242 MAP3K9P80192 1104 aa19.41■□□□□ 0.7
TMEM53-203ENST00000372242 VGLL4Q14135 290 aa19.41■□□□□ 0.7
TMEM53-203ENST00000372242 C8orf34Q49A92 452 aa19.41■□□□□ 0.7
TMEM53-203ENST00000372242 TATDN1Q6P1N9 297 aa19.41■□□□□ 0.7
TMEM53-203ENST00000372242 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.41■□□□□ 0.7
TMEM53-203ENST00000372242 ANAPC4Q9UJX5 808 aa19.41■□□□□ 0.7
TMEM53-203ENST00000372242 GDF11O95390 407 aa19.41■□□□□ 0.7
TMEM53-203ENST00000372242 IMMTQ16891 758 aaKnown RBP19.41■□□□□ 0.7
TMEM53-203ENST00000372242 ANKRD13AQ8IZ07 590 aa19.41■□□□□ 0.7
TMEM53-203ENST00000372242 SWAP70Q9UH65 585 aa19.41■□□□□ 0.7
TMEM53-203ENST00000372242 REC8O95072 547 aa19.4■□□□□ 0.7
TMEM53-203ENST00000372242 CERKLQ49MI3 558 aaPredicted RBP19.4■□□□□ 0.7
TMEM53-203ENST00000372242 TBC1D10CQ8IV04 446 aa19.4■□□□□ 0.7
TMEM53-203ENST00000372242 TAF6LQ9Y6J9 622 aa19.4■□□□□ 0.7
TMEM53-203ENST00000372242 CTNND1O60716 968 aaKnown RBP19.39■□□□□ 0.7
TMEM53-203ENST00000372242 SEC24BO95487 1268 aa19.39■□□□□ 0.7
TMEM53-203ENST00000372242 SLC3A2P08195 630 aaKnown RBP19.39■□□□□ 0.7
TMEM53-203ENST00000372242 CYP21A2P08686 494 aa19.39■□□□□ 0.7
TMEM53-203ENST00000372242 HSPA6P17066 643 aa19.39■□□□□ 0.7
TMEM53-203ENST00000372242 CAP2P40123 477 aa19.39■□□□□ 0.7
TMEM53-203ENST00000372242 ELP3Q9H9T3 547 aa19.39■□□□□ 0.7
TMEM53-203ENST00000372242 MKNK2Q9HBH9 465 aa19.39■□□□□ 0.7
TMEM53-203ENST00000372242 CSADQ9Y600 493 aa19.39■□□□□ 0.7
TMEM53-203ENST00000372242 SNCAIPQ9Y6H5 919 aa19.39■□□□□ 0.7
TMEM53-203ENST00000372242 LAMA4Q16363 1823 aa19.39■□□□□ 0.69
TMEM53-203ENST00000372242 MYH8P13535 1937 aa19.39■□□□□ 0.69
TMEM53-203ENST00000372242 PDE4BQ07343 736 aa19.39■□□□□ 0.69
TMEM53-203ENST00000372242 RASA1P20936 1047 aa19.38■□□□□ 0.69
TMEM53-203ENST00000372242 NECTIN1Q15223 517 aa19.38■□□□□ 0.69
TMEM53-203ENST00000372242 CCDC84Q86UT8 332 aaPredicted RBP19.38■□□□□ 0.69
TMEM53-203ENST00000372242 SCYL3Q8IZE3 742 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms