RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 AP1ARQ63HQ0 302 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 LRRC8AQ8IWT6 810 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 DCAF5Q96JK2 942 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 CPDO75976 1380 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 TUBGCP6Q96RT7 1819 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 C6orf229H3BNL8 230 aa10.15□□□□□ -0.79
ATG4A-203ENST00000372232 GRM8O00222 908 aa10.15□□□□□ -0.79
ATG4A-203ENST00000372232 CYP27B1O15528 508 aa10.15□□□□□ -0.79
ATG4A-203ENST00000372232 ERLIN2O94905 339 aa10.15□□□□□ -0.79
ATG4A-203ENST00000372232 PAX7P23759 505 aa10.15□□□□□ -0.79
ATG4A-203ENST00000372232 MCM2P49736 904 aa10.15□□□□□ -0.79
ATG4A-203ENST00000372232 AIMP1Q12904 312 aaKnown RBP10.15□□□□□ -0.79
ATG4A-203ENST00000372232 NCOA4Q13772 614 aa10.15□□□□□ -0.79
ATG4A-203ENST00000372232 CRYMQ14894 314 aa10.15□□□□□ -0.79
ATG4A-203ENST00000372232 DPH6Q7L8W6 267 aa10.15□□□□□ -0.79
ATG4A-203ENST00000372232 VEZTQ9HBM0 779 aa10.15□□□□□ -0.79
ATG4A-203ENST00000372232 USP42Q9H9J4 1324 aaKnown RBP10.14□□□□□ -0.79
ATG4A-203ENST00000372232 PPP1R3GB7ZBB8 358 aa10.14□□□□□ -0.79
ATG4A-203ENST00000372232 H3BQF6 201 aa10.14□□□□□ -0.79
ATG4A-203ENST00000372232 KCNH2Q12809 1159 aa10.14□□□□□ -0.79
ATG4A-203ENST00000372232 CCDC144BQ3MJ40 725 aa10.14□□□□□ -0.79
ATG4A-203ENST00000372232 CPLX2Q6PUV4 134 aaKnown RBP10.14□□□□□ -0.79
ATG4A-203ENST00000372232 CCDC144CPQ8IYA2 1237 aa10.14□□□□□ -0.79
ATG4A-203ENST00000372232 IL17RAQ96F46 866 aa10.14□□□□□ -0.79
ATG4A-203ENST00000372232 ZNF496Q96IT1 587 aaPredicted RBP10.14□□□□□ -0.79
ATG4A-203ENST00000372232 WDR33Q9C0J8 1336 aaKnown RBP10.14□□□□□ -0.79
ATG4A-203ENST00000372232 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
ATG4A-203ENST00000372232 TOM1O60784 492 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 IGKV5-2P06315 115 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 GPTP24298 496 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 ICA1Q05084 483 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 DDR1Q08345 913 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 TRAF1Q13077 416 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 LRRC31Q6UY01 552 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 KAZALD1Q96I82 304 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 SH3GL3Q99963 347 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 FUT8Q9BYC5 575 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 TRIM6Q9C030 488 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-203ENST00000372232 IL25Q9H293 177 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 CLIP2Q9UDT6 1046 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 PALD1Q9ULE6 856 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 TMCO5BA8MYB1 307 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 PPFIA4O75335 1185 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 MAP4K4O95819 1239 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-203ENST00000372232 SNRPA1P09661 255 aaKnown RBP10.13□□□□□ -0.79
ATG4A-203ENST00000372232 NEFHP12036 1026 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 MYL6BP14649 208 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 NEK4P51957 841 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 SF3A1Q15459 793 aaKnown RBP10.13□□□□□ -0.79
ATG4A-203ENST00000372232 C1QTNF12Q5T7M4 302 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 LARP1Q6PKG0 1096 aaKnown RBP10.13□□□□□ -0.79
ATG4A-203ENST00000372232 BRINP3Q76B58 766 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 CLASRPQ8N2M8 674 aaKnown RBP10.13□□□□□ -0.79
ATG4A-203ENST00000372232 CCDC26Q8TAB7 109 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 ZNF483Q8TF39 744 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-203ENST00000372232 CCDC34Q96HJ3 373 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 SUCLG2Q96I99 432 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 TTC41PQ6P2S7 1318 aa10.13□□□□□ -0.79
ATG4A-203ENST00000372232 CAND2O75155 1236 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 TADA3O75528 432 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 MAPK1P28482 360 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 GCGRP47871 477 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 RWDD2BP57060 319 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 LRP10Q7Z4F1 713 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 TTC5Q8N0Z6 440 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 CNTROBQ8N137 903 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 MSL3Q8N5Y2 521 aaKnown RBP10.12□□□□□ -0.79
ATG4A-203ENST00000372232 TDRD7Q8NHU6 1098 aaKnown RBP10.12□□□□□ -0.79
ATG4A-203ENST00000372232 XAGE3Q8WTP9 111 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 ZNF594Q96JF6 807 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-203ENST00000372232 TRIM5Q9C035 493 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 PA2G4Q9UQ80 394 aaKnown RBP10.12□□□□□ -0.79
ATG4A-203ENST00000372232 USP16Q9Y5T5 823 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 SCN11AQ9UI33 1791 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 EFCAB8A8MWE9 144 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 ANKRD65E5RJM6 399 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 RTN2O75298 545 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 GLRX3O76003 335 aaKnown RBP10.12□□□□□ -0.79
ATG4A-203ENST00000372232 SKILP12757 684 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 MRPL12P52815 198 aaKnown RBP10.12□□□□□ -0.79
ATG4A-203ENST00000372232 CCZ1BP86790 482 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 CCZ1P86791 482 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-203ENST00000372232 SCRN1Q12765 414 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 CCDC96Q2M329 555 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 COPS6Q7L5N1 327 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 ANKRD13AQ8IZ07 590 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 BICC1Q9H694 974 aaKnown RBP10.12□□□□□ -0.79
ATG4A-203ENST00000372232 IRAK4Q9NWZ3 460 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 CRYBG1Q9Y4K1 1723 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 MRC1P22897 1456 aa10.12□□□□□ -0.79
ATG4A-203ENST00000372232 NEURL1BA8MQ27 555 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 MAP2K7O14733 419 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 PRMT3O60678 531 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 LGR5O75473 907 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 MYBL2P10244 700 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 PIP4K2BP78356 416 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 NEXNQ0ZGT2 675 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 SNW1Q13573 536 aaKnown RBP10.11□□□□□ -0.79
ATG4A-203ENST00000372232 WWC2Q6AWC2 1192 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 LUZP1Q86V48 1076 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms