RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TTF2Q9UNY4 1162 aaKnown RBP14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 PNMA6EA0A0J9YXQ4 647 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 ZBED4O75132 1171 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 TNFAIP1Q13829 316 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 MFSD14BQ5SR56 506 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 USP40Q9NVE5 1235 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 CCDC172P0C7W6 258 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 SEPT12Q8IYM1 358 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 KBTBD3Q8NAB2 608 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 USP6NLQ92738 828 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 TET3O43151 1660 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 TBC1D5Q92609 795 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 ZNF532Q9HCE3 1301 aa14.95□□□□□ -0.02
RAPGEF1-201ENST00000372189 FAM182BQ5T319 152 aa14.94□□□□□ -0.02
RAPGEF1-201ENST00000372189 NBPF11Q86T75 865 aa14.94□□□□□ -0.02
RAPGEF1-201ENST00000372189 DTHD1Q6ZMT9 781 aa14.94□□□□□ -0.02
RAPGEF1-201ENST00000372189 DHX58Q96C10 678 aa14.94□□□□□ -0.02
RAPGEF1-201ENST00000372189 SPTLC2O15270 562 aa14.94□□□□□ -0.02
RAPGEF1-201ENST00000372189 IL6STP40189 918 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF1-201ENST00000372189 CCDC6Q16204 474 aa14.94□□□□□ -0.02
RAPGEF1-201ENST00000372189 KIAA0753Q2KHM9 967 aa14.94□□□□□ -0.02
RAPGEF1-201ENST00000372189 MACROD2A1Z1Q3 448 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 TACC1O75410 805 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 TUBBP07437 444 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 BRDTQ58F21 947 aaPredicted RBP14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 MAP3K9P80192 1104 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 BRAPQ7Z569 592 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 KIF24Q5T7B8 1368 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 IGSF1Q8N6C5 1336 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 SLC27A2O14975 620 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 RPS6KB1P23443 525 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 KRT83P78385 493 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 SH2D4BQ5SQS7 431 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 SELENOOQ9BVL4 669 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 CTNNA2P26232 953 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 DDX23Q9BUQ8 820 aaKnown RBP14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 PKD2L1Q9P0L9 805 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 PPEF1O14829 653 aaPredicted RBP14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 PRDM1O75626 825 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 CTDSPL2Q05D32 466 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 FAM160A1Q05DH4 1040 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 MICALL1Q8N3F8 863 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 GLT8D2Q9H1C3 349 aa14.93□□□□□ -0.02
RAPGEF1-201ENST00000372189 PSMA7O14818 248 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 SLC1A4P43007 532 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 DOK7Q18PE1 504 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 CCDC92Q53HC0 331 aaPredicted RBP14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 FCHSD1Q86WN1 690 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 ARAP3Q8WWN8 1544 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 ADCY10Q96PN6 1610 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 SREK1Q8WXA9 508 aaKnown RBP14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 VPS18Q9P253 973 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 CSADQ9Y600 493 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 IBTKQ9P2D0 1353 aaPredicted RBP14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 PRR36Q9H6K5 1346 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 IMPG2Q9BZV3 1241 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 SYNMO15061 1565 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 ERBB3P21860 1342 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 EBAG9O00559 213 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 ATP2C2O75185 946 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 DEXIO95424 95 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 ATRIPQ8WXE1 791 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 USP26Q9BXU7 913 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 SYNCQ9H7C4 482 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 AS3MTQ9HBK9 375 aa14.92□□□□□ -0.02
RAPGEF1-201ENST00000372189 NOL3O60936 208 aaKnown RBP14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 BLMP54132 1417 aaPredicted RBP14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 STMN4Q9H169 189 aaPredicted RBP14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 A2ML1A8K2U0 1454 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 LETM2Q2VYF4 491 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 OTUD7AQ8TE49 926 aaPredicted RBP14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 FAM227BQ96M60 508 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 VIMP08670 466 aaKnown RBP14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 SYT10Q6XYQ8 523 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 APBB1IPQ7Z5R6 666 aaPredicted RBP14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 RASAL2Q9UJF2 1139 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 SPATA31A3Q5VYP0 1347 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 GPHNQ9NQX3 736 aaPredicted RBP14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 ARPP21Q9UBL0 812 aaPredicted RBP14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 SERPINB2P05120 415 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 CHRNDQ07001 517 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 ANKS4BQ8N8V4 417 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 DCPSQ96C86 337 aaKnown RBP14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 FAM212AQ96EL1 285 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 ERO1AQ96HE7 468 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 RABGAP1Q9Y3P9 1069 aa14.91□□□□□ -0.02
RAPGEF1-201ENST00000372189 KRT86O43790 486 aa14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 GYG1P46976 350 aa14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 CEP128Q6ZU80 1094 aa14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 CCDC121Q6ZUS5 278 aa14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 ANGEL1Q9UNK9 670 aaKnown RBP14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 RRAGDQ9NQL2 400 aaPredicted RBP14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 NOD1Q9Y239 953 aa14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 NDUFB9Q9Y6M9 179 aa14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 ARHGAP31Q2M1Z3 1444 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms