RNA–Protein interactions for RNA: ENST00000371974.7

SURF1-201, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SURF1, Length 1,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-201ENST00000371974 PPIL2Q13356 520 aa30.58■■■□□ 2.49
SURF1-201ENST00000371974 SCYL3Q8IZE3 742 aa30.58■■■□□ 2.49
SURF1-201ENST00000371974 PICK1Q9NRD5 415 aa30.58■■■□□ 2.49
SURF1-201ENST00000371974 CDK5RAP2Q96SN8 1893 aa30.57■■■□□ 2.48
SURF1-201ENST00000371974 FOCADQ5VW36 1801 aa30.57■■■□□ 2.48
SURF1-201ENST00000371974 ALDH1A1P00352 501 aa30.57■■■□□ 2.48
SURF1-201ENST00000371974 SLFNL1Q499Z3 407 aa30.57■■■□□ 2.48
SURF1-201ENST00000371974 OTUD7BQ6GQQ9 843 aa30.57■■■□□ 2.48
SURF1-201ENST00000371974 LCORLQ8N3X6 602 aa30.57■■■□□ 2.48
SURF1-201ENST00000371974 TRIM34Q9BYJ4 488 aa30.57■■■□□ 2.48
SURF1-201ENST00000371974 FAM196BA6NMK8 535 aa30.56■■■□□ 2.48
SURF1-201ENST00000371974 MBD4O95243 580 aa30.56■■■□□ 2.48
SURF1-201ENST00000371974 ZFYP08048 801 aaPredicted RBP30.56■■■□□ 2.48
SURF1-201ENST00000371974 CRACR2BQ8N4Y2 399 aaPredicted RBP30.56■■■□□ 2.48
SURF1-201ENST00000371974 MS4A4AQ96JQ5 239 aa30.56■■■□□ 2.48
SURF1-201ENST00000371974 ARMT1Q9H993 441 aa30.56■■■□□ 2.48
SURF1-201ENST00000371974 TESPA1A2RU30 521 aaPredicted RBP30.55■■■□□ 2.48
SURF1-201ENST00000371974 RNF113AO15541 343 aaKnown RBP30.55■■■□□ 2.48
SURF1-201ENST00000371974 TTC6Q86TZ1 520 aa30.55■■■□□ 2.48
SURF1-201ENST00000371974 IFNL1Q8IU54 200 aa30.55■■■□□ 2.48
SURF1-201ENST00000371974 MYH7P12883 1935 aa30.54■■■□□ 2.48
SURF1-201ENST00000371974 IRF6O14896 467 aa30.54■■■□□ 2.48
SURF1-201ENST00000371974 CHGBP05060 677 aa30.54■■■□□ 2.48
SURF1-201ENST00000371974 SNAPC2Q13487 334 aa30.54■■■□□ 2.48
SURF1-201ENST00000371974 CETPP11597 493 aa30.53■■■□□ 2.48
SURF1-201ENST00000371974 COL13A1Q5TAT6 717 aaPredicted RBP30.53■■■□□ 2.48
SURF1-201ENST00000371974 METTL16Q86W50 562 aaKnown RBP30.53■■■□□ 2.48
SURF1-201ENST00000371974 FSD1Q9BTV5 496 aa30.53■■■□□ 2.48
SURF1-201ENST00000371974 CCL15-CCL14A0A0B4J2E2 113 aa30.52■■■□□ 2.48
SURF1-201ENST00000371974 POLR3DP05423 398 aaPredicted RBP30.52■■■□□ 2.48
SURF1-201ENST00000371974 CCL15Q16663 113 aa30.52■■■□□ 2.48
SURF1-201ENST00000371974 SLC4A8Q2Y0W8 1093 aa30.52■■■□□ 2.48
SURF1-201ENST00000371974 SDR42E1Q8WUS8 393 aa30.52■■■□□ 2.48
SURF1-201ENST00000371974 APPBP2Q92624 585 aa30.52■■■□□ 2.48
SURF1-201ENST00000371974 PUS7LQ9H0K6 701 aaKnown RBP30.52■■■□□ 2.48
SURF1-201ENST00000371974 ATP8A2Q9NTI2 1148 aa30.52■■■□□ 2.48
SURF1-201ENST00000371974 IGF2BP3O00425 579 aaKnown RBP eCLIP30.51■■■□□ 2.47
SURF1-201ENST00000371974 PTPRAP18433 802 aa30.51■■■□□ 2.47
SURF1-201ENST00000371974 CAP2P40123 477 aa30.51■■■□□ 2.47
SURF1-201ENST00000371974 DCP1AQ9NPI6 582 aaPredicted RBP30.51■■■□□ 2.47
SURF1-201ENST00000371974 MCM9Q9NXL9 1143 aa30.51■■■□□ 2.47
SURF1-201ENST00000371974 LAMB1P07942 1786 aa30.51■■■□□ 2.47
SURF1-201ENST00000371974 BRI3BPQ8WY22 251 aa30.5■■■□□ 2.47
SURF1-201ENST00000371974 EVI5LQ96CN4 794 aa30.5■■■□□ 2.47
SURF1-201ENST00000371974 DDRGK1Q96HY6 314 aa30.5■■■□□ 2.47
SURF1-201ENST00000371974 EHD4Q9H223 541 aa30.5■■■□□ 2.47
SURF1-201ENST00000371974 SERPINB13Q9UIV8 391 aa30.5■■■□□ 2.47
SURF1-201ENST00000371974 ZHX2Q9Y6X8 837 aa30.5■■■□□ 2.47
SURF1-201ENST00000371974 MYH1P12882 1939 aa30.49■■■□□ 2.47
SURF1-201ENST00000371974 TBC1D8O95759 1140 aa30.49■■■□□ 2.47
SURF1-201ENST00000371974 PTPN18Q99952 460 aa30.49■■■□□ 2.47
SURF1-201ENST00000371974 CFHR5Q9BXR6 569 aa30.49■■■□□ 2.47
SURF1-201ENST00000371974 KCNH4Q9UQ05 1017 aa30.49■■■□□ 2.47
SURF1-201ENST00000371974 CXCL11O14625 94 aa30.48■■■□□ 2.47
SURF1-201ENST00000371974 PRKAB2O43741 272 aa30.48■■■□□ 2.47
SURF1-201ENST00000371974 DNAJC18Q9H819 358 aa30.48■■■□□ 2.47
SURF1-201ENST00000371974 SLC4A4Q9Y6R1 1079 aa30.48■■■□□ 2.47
SURF1-201ENST00000371974 PLEKHM2Q8IWE5 1019 aa30.47■■■□□ 2.47
SURF1-201ENST00000371974 OSBP2Q969R2 916 aa30.47■■■□□ 2.47
SURF1-201ENST00000371974 SIPA1L1O43166 1804 aa30.46■■■□□ 2.47
SURF1-201ENST00000371974 PLCD1P51178 756 aa30.46■■■□□ 2.47
SURF1-201ENST00000371974 AMOTL1Q8IY63 956 aa30.46■■■□□ 2.47
SURF1-201ENST00000371974 STRBPQ96SI9 672 aaKnown RBP30.46■■■□□ 2.47
SURF1-201ENST00000371974 OSBPL3Q9H4L5 887 aa30.46■■■□□ 2.47
SURF1-201ENST00000371974 DOCK1Q14185 1865 aa30.45■■■□□ 2.47
SURF1-201ENST00000371974 RRP1BQ14684 758 aaKnown RBP30.45■■■□□ 2.47
SURF1-201ENST00000371974 TBC1D2Q9BYX2 928 aa30.45■■■□□ 2.47
SURF1-201ENST00000371974 GINM1Q9NU53 330 aa30.45■■■□□ 2.47
SURF1-201ENST00000371974 AFG3L2Q9Y4W6 797 aa30.45■■■□□ 2.47
SURF1-201ENST00000371974 ASNSP08243 561 aa30.44■■■□□ 2.46
SURF1-201ENST00000371974 NAV1Q8NEY1 1877 aa30.44■■■□□ 2.46
SURF1-201ENST00000371974 TRIM6-TRIM34B2RNG4 842 aa30.43■■■□□ 2.46
SURF1-201ENST00000371974 NOM1Q5C9Z4 860 aaKnown RBP30.43■■■□□ 2.46
SURF1-201ENST00000371974 FAM43AQ8N2R8 423 aa30.43■■■□□ 2.46
SURF1-201ENST00000371974 ZCCHC17Q9NP64 241 aaKnown RBP30.43■■■□□ 2.46
SURF1-201ENST00000371974 USP17L5A8MUK1 530 aa30.42■■■□□ 2.46
SURF1-201ENST00000371974 GPAA1O43292 621 aa30.42■■■□□ 2.46
SURF1-201ENST00000371974 GNAT2P19087 354 aa30.42■■■□□ 2.46
SURF1-201ENST00000371974 TATDN1Q6P1N9 297 aa30.42■■■□□ 2.46
SURF1-201ENST00000371974 TICAM2Q86XR7 235 aa30.42■■■□□ 2.46
SURF1-201ENST00000371974 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.42■■■□□ 2.46
SURF1-201ENST00000371974 TRIM75PA6NK02 468 aa30.41■■■□□ 2.46
SURF1-201ENST00000371974 BTBD19C9JJ37 291 aa30.41■■■□□ 2.46
SURF1-201ENST00000371974 GPR25O00155 361 aa30.41■■■□□ 2.46
SURF1-201ENST00000371974 ZMYM1Q5SVZ6 1142 aa30.41■■■□□ 2.46
SURF1-201ENST00000371974 FASTKD5Q7L8L6 764 aaKnown RBP30.41■■■□□ 2.46
SURF1-201ENST00000371974 AS3MTQ9HBK9 375 aa30.41■■■□□ 2.46
SURF1-201ENST00000371974 TAOK2Q9UL54 1235 aa30.41■■■□□ 2.46
SURF1-201ENST00000371974 DDX60LQ5H9U9 1706 aaKnown RBP30.4■■■□□ 2.46
SURF1-201ENST00000371974 USP17L12C9JPN9 530 aa30.4■■■□□ 2.46
SURF1-201ENST00000371974 USP17L21D6R901 530 aa30.4■■■□□ 2.46
SURF1-201ENST00000371974 M0R2C6 588 aa30.4■■■□□ 2.46
SURF1-201ENST00000371974 GDF11O95390 407 aa30.4■■■□□ 2.46
SURF1-201ENST00000371974 CRHR2Q13324 411 aa30.4■■■□□ 2.46
SURF1-201ENST00000371974 TAF1CQ15572 869 aaPredicted RBP30.4■■■□□ 2.46
SURF1-201ENST00000371974 GIMAP6Q6P9H5 292 aa30.4■■■□□ 2.46
SURF1-201ENST00000371974 ANKRD23Q86SG2 305 aa30.4■■■□□ 2.46
SURF1-201ENST00000371974 CCDC84Q86UT8 332 aaPredicted RBP30.4■■■□□ 2.46
SURF1-201ENST00000371974 TNS4Q8IZW8 715 aa30.4■■■□□ 2.46
SURF1-201ENST00000371974 R3HDMLQ9H3Y0 253 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms