RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 RASA3Q14644 834 aa12.9□□□□□ -0.34
EXOSC1-203ENST00000370886 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
EXOSC1-203ENST00000370886 TEX11Q8IYF3 940 aa12.9□□□□□ -0.34
EXOSC1-203ENST00000370886 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.34
EXOSC1-203ENST00000370886 GJA5P36382 358 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 TNNI2P48788 182 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 NFIAQ12857 509 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 TNFAIP1Q13829 316 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 KIF22Q14807 665 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 LRRFIP1Q32MZ4 808 aaKnown RBP12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 TTC22Q5TAA0 569 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 ZSCAN29Q8IWY8 852 aaPredicted RBP12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 OPTNQ96CV9 577 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 PTPN18Q99952 460 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 TMEM39BQ9GZU3 492 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 OSBPL3Q9H4L5 887 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 ARMT1Q9H993 441 aa12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 RANBP2P49792 3224 aaKnown RBP12.89□□□□□ -0.35
EXOSC1-203ENST00000370886 TCRBV5S4A2TA0A5A2 114 aa12.88□□□□□ -0.35
EXOSC1-203ENST00000370886 DLL1O00548 723 aa12.88□□□□□ -0.35
EXOSC1-203ENST00000370886 USP2O75604 605 aaPredicted RBP12.88□□□□□ -0.35
EXOSC1-203ENST00000370886 MBD4O95243 580 aa12.88□□□□□ -0.35
EXOSC1-203ENST00000370886 PLCG2P16885 1265 aa12.88□□□□□ -0.35
EXOSC1-203ENST00000370886 USP5P45974 858 aa12.88□□□□□ -0.35
EXOSC1-203ENST00000370886 NBPF12Q5TAG4 269 aaPredicted RBP12.88□□□□□ -0.35
EXOSC1-203ENST00000370886 MAPKAPK5Q8IW41 473 aa12.88□□□□□ -0.35
EXOSC1-203ENST00000370886 TGFBRAP1Q8WUH2 860 aa12.88□□□□□ -0.35
EXOSC1-203ENST00000370886 GTF3C3Q9Y5Q9 886 aa12.88□□□□□ -0.35
EXOSC1-203ENST00000370886 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 GSPT1P15170 499 aaKnown RBP12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 SDSP20132 328 aa12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 GTF2A2P52657 109 aa12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 PRMT2P55345 433 aa12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 RHBDL3P58872 404 aa12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 CAP1Q01518 475 aa12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 UBE3CQ15386 1083 aa12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 ZFPM1Q8IX07 1006 aa12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 LCORLQ8N3X6 602 aa12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 SLC17A8Q8NDX2 589 aa12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 ELP3Q9H9T3 547 aa12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 SAP30BPQ9UHR5 308 aaKnown RBP12.87□□□□□ -0.35
EXOSC1-203ENST00000370886 CCL15-CCL14A0A0B4J2E2 113 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 PRKAB2O43741 272 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 IGSF3O75054 1194 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 MYCP01106 439 aaPredicted RBP12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 GNRH1P01148 92 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 PPP4CP60510 307 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 CCL15Q16663 113 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 BRI3BPQ8WY22 251 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 APPBP2Q92624 585 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 DPF3Q92784 378 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 MS4A4AQ96JQ5 239 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 SEC62Q99442 399 aaKnown RBP12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 CRNKL1Q9BZJ0 848 aaKnown RBP12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 PUS7LQ9H0K6 701 aaKnown RBP12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 DIAPH3Q9NSV4 1193 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 FAM198AQ9UFP1 575 aa12.86□□□□□ -0.35
EXOSC1-203ENST00000370886 M0R2C6 588 aa12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 APPP05067 770 aa12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 TMED8Q6PL24 325 aaPredicted RBP12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 CCDC129Q6ZRS4 1044 aa12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 SH3TC2Q8TF17 1288 aa12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 FAM151AQ8WW52 585 aa12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 OSBP2Q969R2 916 aa12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 FAM227BQ96M60 508 aa12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 HTATIP2Q9BUP3 242 aa12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 ZCCHC17Q9NP64 241 aaKnown RBP12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 CSADQ9Y600 493 aa12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 SLC4A4Q9Y6R1 1079 aa12.85□□□□□ -0.35
EXOSC1-203ENST00000370886 TLR2O60603 784 aa12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 ENTPD3O75355 529 aa12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 LACTBP83111 547 aaPredicted RBP12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 NMIQ13287 307 aaPredicted RBP12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 FKBP1CQ5VVH2 108 aa12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 CWC27Q6UX04 472 aaKnown RBP12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 MIGA2Q7L4E1 593 aa12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 FAM83AQ86UY5 434 aa12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 CERS3Q8IU89 383 aa12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 SDR42E1Q8WUS8 393 aa12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 IDI2Q9BXS1 227 aa12.84□□□□□ -0.35
EXOSC1-203ENST00000370886 GPAA1O43292 621 aa12.83□□□□□ -0.36
EXOSC1-203ENST00000370886 ZMYM1Q5SVZ6 1142 aa12.83□□□□□ -0.36
EXOSC1-203ENST00000370886 FAM43AQ8N2R8 423 aa12.83□□□□□ -0.36
EXOSC1-203ENST00000370886 DDRGK1Q96HY6 314 aa12.83□□□□□ -0.36
EXOSC1-203ENST00000370886 PALD1Q9ULE6 856 aa12.83□□□□□ -0.36
EXOSC1-203ENST00000370886 NR2E3Q9Y5X4 410 aa12.83□□□□□ -0.36
EXOSC1-203ENST00000370886 A0A0C4DFX4 3053 aa12.83□□□□□ -0.36
EXOSC1-203ENST00000370886 FLT1P17948 1338 aa12.83□□□□□ -0.36
EXOSC1-203ENST00000370886 A0A0D9SFI3 127 aa12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 A0A1W2PPC1 479 aa12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 DDTLA6NHG4 134 aaPredicted RBP12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 HIP1O00291 1037 aa12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 POLR3DP05423 398 aaPredicted RBP12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 CETPP11597 493 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms