RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 DZIP3Q86Y13 1208 aaKnown RBP19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 SPDYE3A6NKU9 549 aa19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 SLC9C1Q4G0N8 1177 aa19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 PSMB7Q99436 277 aa19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 SERTAD1Q9UHV2 236 aa19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 A0A0D9SFI3 127 aa19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 SREK1Q8WXA9 508 aaKnown RBP19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 ARMT1Q9H993 441 aa19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 GDAP1L1Q96MZ0 367 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 GIGYF1O75420 1035 aaPredicted RBP19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 GCP02774 474 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 ATP5DP30049 168 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 GCKRQ14397 625 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 NELFBQ8WX92 580 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 SEC62Q99442 399 aaKnown RBP19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 NRBP1Q9UHY1 535 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 TRPM2O94759 1503 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 ALDH3A1P30838 453 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 EDC3Q96F86 508 aaKnown RBP19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 TRIM7Q9C029 511 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 KCNJ14Q9UNX9 436 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 PFKFB2O60825 505 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 FAM89AQ96GI7 184 aa19.15■□□□□ 0.66
PTP4A1-201ENST00000370651 CFAP221Q4G0U5 840 aa19.14■□□□□ 0.66
PTP4A1-201ENST00000370651 PPFIBP2Q8ND30 876 aa19.14■□□□□ 0.66
PTP4A1-201ENST00000370651 UTP11Q9Y3A2 253 aaKnown RBP19.14■□□□□ 0.66
PTP4A1-201ENST00000370651 CCDC160A6NGH7 325 aa19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 CUL4AQ13619 759 aa19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 BEND3Q5T5X7 828 aa19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 LGR6Q9HBX8 967 aa19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 MAGI2Q86UL8 1455 aa19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 ADAMTS2O95450 1211 aa19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 FERP16591 822 aa19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 ZNF594Q96JF6 807 aaPredicted RBP19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 CMA1P23946 247 aa19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 PPP2R5BQ15173 497 aa19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 TSKSQ9UJT2 592 aa19.14■□□□□ 0.65
PTP4A1-201ENST00000370651 PICALMQ13492 652 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 ASIC2Q16515 512 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 CADPS2Q86UW7 1296 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 STAMQ92783 540 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 ATP11AP98196 1134 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 PCDHA7Q9UN72 937 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 KDM5DQ9BY66 1539 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 OSBPL3Q9H4L5 887 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 CEP104O60308 925 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 PARP1P09874 1014 aaKnown RBP19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 CDC25BP30305 580 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 CLNS1AP54105 237 aaKnown RBP19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 KLHL7Q8IXQ5 586 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 STAP2Q9UGK3 403 aa19.13■□□□□ 0.65
PTP4A1-201ENST00000370651 EPB41P11171 864 aaKnown RBP19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 OR8K1Q8NGG5 319 aa19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 CCDC84Q86UT8 332 aaPredicted RBP19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 RASEFQ8IZ41 740 aa19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 IMPG2Q9BZV3 1241 aa19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 PLCG2P16885 1265 aa19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 CCDC63Q8NA47 563 aa19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 TRIM31Q9BZY9 425 aa19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 LSG1Q9H089 658 aaKnown RBP19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 ABCC10Q5T3U5 1492 aa19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 CETN3O15182 167 aa19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 ITGA6P23229 1130 aa19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 EAF2Q96CJ1 260 aaPredicted RBP19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 FANCLQ9NW38 375 aa19.12■□□□□ 0.65
PTP4A1-201ENST00000370651 CROCCP2Q86T23 111 aa19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 SETDB2Q96T68 719 aa19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 IFIH1Q9BYX4 1025 aaKnown RBP19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 ATP6V1AP38606 617 aa19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 SPOPO43791 374 aa19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 BUB1BO60566 1050 aaPredicted RBP19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 TNFAIP3P21580 790 aa19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 PUM3Q15397 648 aaKnown RBP19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 PNMA8AQ86V59 439 aaPredicted RBP19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 CACTINQ8WUQ7 758 aaKnown RBP19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 NAP1L4Q99733 375 aaKnown RBP19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 EIF4A1P60842 406 aaKnown RBP19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 ZNF804AQ7Z570 1209 aa19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 GOLGA5Q8TBA6 731 aa19.11■□□□□ 0.65
PTP4A1-201ENST00000370651 BLZF1Q9H2G9 400 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 GCC2Q8IWJ2 1684 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 E7EVH7 732 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 PRDM1O75626 825 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 ATP2A2P16615 1042 aaKnown RBP19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 RABGGTAQ92696 567 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 PPP1R13BQ96KQ4 1090 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 NDUFA8P51970 172 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 F8W031 263 aaPredicted RBP19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 GNGT1P63211 74 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 STMN2Q93045 179 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 MED4Q9NPJ6 270 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.1■□□□□ 0.653e-6■■■■■ 27.9
PTP4A1-201ENST00000370651 DDX41Q9UJV9 622 aaKnown RBP19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 FRMD4BQ9Y2L6 1034 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 ASXL2Q76L83 1435 aa19.1■□□□□ 0.65
PTP4A1-201ENST00000370651 CTDSPL2Q05D32 466 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 PLEKHF1Q96S99 279 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms