RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ZNF512BQ96KM6 892 aaPredicted RBP18.11■□□□□ 0.49
LMO4-201ENST00000370542 COL2A1P02458 1487 aaPredicted RBP18.11■□□□□ 0.49
LMO4-201ENST00000370542 UQCRFS1P1P0C7P4 283 aa18.1■□□□□ 0.49
LMO4-201ENST00000370542 RLBP1P12271 317 aa18.1■□□□□ 0.49
LMO4-201ENST00000370542 PTPRAP18433 802 aa18.1■□□□□ 0.49
LMO4-201ENST00000370542 GPAT2Q6NUI2 795 aa18.1■□□□□ 0.49
LMO4-201ENST00000370542 DPF3Q92784 378 aa18.1■□□□□ 0.49
LMO4-201ENST00000370542 PTCH2Q9Y6C5 1203 aa18.1■□□□□ 0.49
LMO4-201ENST00000370542 A0A0G2JLL6 359 aaPredicted RBP18.09■□□□□ 0.49
LMO4-201ENST00000370542 PDHXO00330 501 aa18.09■□□□□ 0.49
LMO4-201ENST00000370542 CTNND1O60716 968 aaKnown RBP18.09■□□□□ 0.49
LMO4-201ENST00000370542 LDHCP07864 332 aa18.09■□□□□ 0.49
LMO4-201ENST00000370542 GSTO1P78417 241 aa18.09■□□□□ 0.49
LMO4-201ENST00000370542 TNNI3KQ59H18 835 aa18.09■□□□□ 0.49
LMO4-201ENST00000370542 TBC1D9Q6ZT07 1266 aa18.09■□□□□ 0.49
LMO4-201ENST00000370542 PRRT2Q7Z6L0 340 aaPredicted RBP18.09■□□□□ 0.49
LMO4-201ENST00000370542 LRCH3Q96II8 777 aa18.09■□□□□ 0.49
LMO4-201ENST00000370542 AFG3L2Q9Y4W6 797 aa18.09■□□□□ 0.49
LMO4-201ENST00000370542 FPGT-TNNI3KV9GXZ4 949 aa18.09■□□□□ 0.49
LMO4-201ENST00000370542 PHIPQ8WWQ0 1821 aa18.08■□□□□ 0.48
LMO4-201ENST00000370542 PRMT2P55345 433 aa18.08■□□□□ 0.48
LMO4-201ENST00000370542 ARHGAP39Q9C0H5 1083 aa18.08■□□□□ 0.48
LMO4-201ENST00000370542 BCRP11274 1271 aa18.07■□□□□ 0.48
LMO4-201ENST00000370542 CTGFP29279 349 aa18.07■□□□□ 0.48
LMO4-201ENST00000370542 PDE3AQ14432 1141 aa18.07■□□□□ 0.48
LMO4-201ENST00000370542 GORABQ5T7V8 394 aa18.07■□□□□ 0.48
LMO4-201ENST00000370542 SLC45A1Q9Y2W3 748 aa18.07■□□□□ 0.48
LMO4-201ENST00000370542 PTPRFP10586 1907 aa18.07■□□□□ 0.48
LMO4-201ENST00000370542 SLURP2P0DP57 97 aa18.06■□□□□ 0.48
LMO4-201ENST00000370542 PPP4CP60510 307 aa18.06■□□□□ 0.48
LMO4-201ENST00000370542 KIF22Q14807 665 aa18.06■□□□□ 0.48
LMO4-201ENST00000370542 UBE2Q1Q7Z7E8 422 aa18.06■□□□□ 0.48
LMO4-201ENST00000370542 SHISA4Q96DD7 197 aa18.06■□□□□ 0.48
LMO4-201ENST00000370542 DBNDD2Q9BQY9 259 aa18.06■□□□□ 0.48
LMO4-201ENST00000370542 UPF2Q9HAU5 1272 aaKnown RBP18.06■□□□□ 0.48
LMO4-201ENST00000370542 ISY1Q9ULR0 285 aaKnown RBP18.06■□□□□ 0.48
LMO4-201ENST00000370542 ZHX2Q9Y6X8 837 aa18.06■□□□□ 0.48
LMO4-201ENST00000370542 ZSWIM8A7E2V4 1837 aa18.06■□□□□ 0.48
LMO4-201ENST00000370542 DOCK1Q14185 1865 aa18.05■□□□□ 0.48
LMO4-201ENST00000370542 SURF6O75683 361 aaKnown RBP18.05■□□□□ 0.48
LMO4-201ENST00000370542 PICALMQ13492 652 aa18.05■□□□□ 0.48
LMO4-201ENST00000370542 GPR153Q6NV75 609 aa18.05■□□□□ 0.48
LMO4-201ENST00000370542 FASTKD5Q7L8L6 764 aaKnown RBP18.05■□□□□ 0.48
LMO4-201ENST00000370542 ZSCAN29Q8IWY8 852 aaPredicted RBP18.05■□□□□ 0.48
LMO4-201ENST00000370542 FTSJ3Q8IY81 847 aaKnown RBP18.05■□□□□ 0.48
LMO4-201ENST00000370542 OSBPL5Q9H0X9 879 aaPredicted RBP18.05■□□□□ 0.48
LMO4-201ENST00000370542 PICK1Q9NRD5 415 aa18.05■□□□□ 0.48
LMO4-201ENST00000370542 RAI14Q9P0K7 980 aa18.05■□□□□ 0.48
LMO4-201ENST00000370542 STXBP5LQ9Y2K9 1186 aa18.05■□□□□ 0.48
LMO4-201ENST00000370542 CYP2E1P05181 493 aaPredicted RBP18.04■□□□□ 0.48
LMO4-201ENST00000370542 CCDC158Q5M9N0 1113 aa18.04■□□□□ 0.48
LMO4-201ENST00000370542 METTL16Q86W50 562 aaKnown RBP18.04■□□□□ 0.48
LMO4-201ENST00000370542 TRIM47Q96LD4 638 aa18.04■□□□□ 0.48
LMO4-201ENST00000370542 PARK7Q99497 189 aaKnown RBP18.04■□□□□ 0.48
LMO4-201ENST00000370542 C1orf115Q9H7X2 142 aa18.04■□□□□ 0.48
LMO4-201ENST00000370542 SRRDQ9UH36 339 aa18.04■□□□□ 0.48
LMO4-201ENST00000370542 CPA4Q9UI42 421 aa18.04■□□□□ 0.48
LMO4-201ENST00000370542 VCANP13611 3396 aa18.04■□□□□ 0.48
LMO4-201ENST00000370542 MYCP01106 439 aaPredicted RBP18.03■□□□□ 0.48
LMO4-201ENST00000370542 CEP85Q6P2H3 762 aa18.03■□□□□ 0.48
LMO4-201ENST00000370542 ITPRIPQ8IWB1 547 aa18.03■□□□□ 0.48
LMO4-201ENST00000370542 LRP2BPQ9P2M1 347 aa18.03■□□□□ 0.48
LMO4-201ENST00000370542 DBNLQ9UJU6 430 aaKnown RBP18.03■□□□□ 0.48
LMO4-201ENST00000370542 NR2E3Q9Y5X4 410 aa18.03■□□□□ 0.48
LMO4-201ENST00000370542 MAST2Q6P0Q8 1798 aa18.02■□□□□ 0.48
LMO4-201ENST00000370542 PSMC4P43686 418 aa18.02■□□□□ 0.48
LMO4-201ENST00000370542 TTC39AQ5SRH9 613 aa18.02■□□□□ 0.48
LMO4-201ENST00000370542 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
LMO4-201ENST00000370542 SH3TC2Q8TF17 1288 aa18.02■□□□□ 0.48
LMO4-201ENST00000370542 EAF2Q96CJ1 260 aaPredicted RBP18.02■□□□□ 0.48
LMO4-201ENST00000370542 TBC1D2Q9BYX2 928 aa18.02■□□□□ 0.48
LMO4-201ENST00000370542 HERC5Q9UII4 1024 aaKnown RBP18.02■□□□□ 0.48
LMO4-201ENST00000370542 EIF5BO60841 1220 aaKnown RBP18.01■□□□□ 0.47
LMO4-201ENST00000370542 CYP2C8P10632 490 aa18.01■□□□□ 0.47
LMO4-201ENST00000370542 PLCG2P16885 1265 aa18.01■□□□□ 0.47
LMO4-201ENST00000370542 OSBPP22059 807 aa18.01■□□□□ 0.47
LMO4-201ENST00000370542 NAA16Q6N069 864 aaPredicted RBP18.01■□□□□ 0.47
LMO4-201ENST00000370542 ADGRA1Q86SQ6 560 aa18.01■□□□□ 0.47
LMO4-201ENST00000370542 TEX11Q8IYF3 940 aa18.01■□□□□ 0.47
LMO4-201ENST00000370542 SH3RF3Q8TEJ3 882 aaPredicted RBP18.01■□□□□ 0.47
LMO4-201ENST00000370542 HTATIP2Q9BUP3 242 aa18.01■□□□□ 0.47
LMO4-201ENST00000370542 DHX36Q9H2U1 1008 aaKnown RBP18.01■□□□□ 0.47
LMO4-201ENST00000370542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.01■□□□□ 0.47
LMO4-201ENST00000370542 SNRKQ9NRH2 765 aa18.01■□□□□ 0.47
LMO4-201ENST00000370542 MYO5AQ9Y4I1 1855 aaKnown RBP18.01■□□□□ 0.47
LMO4-201ENST00000370542 SIPA1L1O43166 1804 aa18■□□□□ 0.47
LMO4-201ENST00000370542 SPTBN5Q9NRC6 3674 aaKnown RBP18■□□□□ 0.47
LMO4-201ENST00000370542 BAG3O95817 575 aa18■□□□□ 0.47
LMO4-201ENST00000370542 HOXD10P28358 340 aa18■□□□□ 0.47
LMO4-201ENST00000370542 CAP2P40123 477 aa18■□□□□ 0.47
LMO4-201ENST00000370542 OS9Q13438 667 aaPredicted RBP18■□□□□ 0.47
LMO4-201ENST00000370542 RRP1BQ14684 758 aaKnown RBP18■□□□□ 0.47
LMO4-201ENST00000370542 DEFB123Q8N688 67 aa18■□□□□ 0.47
LMO4-201ENST00000370542 PI4KBQ9UBF8 816 aa18■□□□□ 0.47
LMO4-201ENST00000370542 AGTPBP1Q9UPW5 1226 aa18■□□□□ 0.47
LMO4-201ENST00000370542 FOCADQ5VW36 1801 aa18■□□□□ 0.47
LMO4-201ENST00000370542 CDK5RAP2Q96SN8 1893 aa17.99■□□□□ 0.47
LMO4-201ENST00000370542 ZAP70P43403 619 aa17.99■□□□□ 0.47
LMO4-201ENST00000370542 SH3D19Q5HYK7 790 aa17.99■□□□□ 0.47
LMO4-201ENST00000370542 TMED8Q6PL24 325 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms