RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 DDX21Q9NR30 783 aaKnown RBP eCLIP13.84□□□□□ -0.19
HCFC1-202ENST00000369984 SMIM24O75264 130 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 BEND3Q5T5X7 828 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 PKD2L1Q9P0L9 805 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 PEX19P40855 299 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 SLC9C1Q4G0N8 1177 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 MGARPQ8TDB4 240 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 AK9Q5TCS8 1911 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 MAP2K2P36507 400 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 CFAP221Q4G0U5 840 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 ADGRL1O94910 1474 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 IFT140Q96RY7 1462 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 SF3A3Q12874 501 aaKnown RBP eCLIP13.84□□□□□ -0.194e-8■■■■■ 33.1
HCFC1-202ENST00000369984 SYCE1Q8N0S2 351 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 NIP7Q9Y221 180 aaKnown RBP eCLIP13.84□□□□□ -0.19
HCFC1-202ENST00000369984 MUM1Q2TAK8 710 aa13.83□□□□□ -0.19
HCFC1-202ENST00000369984 CROCCP2Q86T23 111 aa13.83□□□□□ -0.19
HCFC1-202ENST00000369984 MRPL50Q8N5N7 158 aaKnown RBP13.83□□□□□ -0.19
HCFC1-202ENST00000369984 GBP5Q96PP8 586 aa13.83□□□□□ -0.19
HCFC1-202ENST00000369984 PSMB7Q99436 277 aa13.83□□□□□ -0.19
HCFC1-202ENST00000369984 CHMP2AO43633 222 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 PAK1Q13153 545 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 GRM1Q13255 1194 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 KSR2Q6VAB6 950 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 CABS1Q96KC9 395 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 CARD6Q9BX69 1037 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 CSGALNACT2Q8N6G5 542 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
HCFC1-202ENST00000369984 STRN3Q13033 797 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 VPS41P49754 854 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 LGSNQ5TDP6 509 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 TRIM68Q6AZZ1 485 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 HAUS2Q9NVX0 235 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 AFG3L2Q9Y4W6 797 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 KRT15P19012 456 aa13.83□□□□□ -0.2
HCFC1-202ENST00000369984 PFDN1O60925 122 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 PPFIA1Q13136 1202 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 KCNH3Q9ULD8 1083 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 TFCP2Q12800 502 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 NAP1L4Q99733 375 aaKnown RBP13.82□□□□□ -0.2
HCFC1-202ENST00000369984 ECM2O94769 699 aaPredicted RBP13.82□□□□□ -0.2
HCFC1-202ENST00000369984 OAS2P29728 719 aaKnown RBP13.82□□□□□ -0.2
HCFC1-202ENST00000369984 PAK2Q13177 524 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 AP1ARQ63HQ0 302 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 CLSTN2Q9H4D0 955 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 BICC1Q9H694 974 aaKnown RBP13.82□□□□□ -0.2
HCFC1-202ENST00000369984 KDM5AP29375 1690 aaKnown RBP13.82□□□□□ -0.2
HCFC1-202ENST00000369984 MSH6P52701 1360 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 RPS6KB1P23443 525 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 MTMR3Q13615 1198 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 TRIM6Q9C030 488 aaPredicted RBP13.82□□□□□ -0.2
HCFC1-202ENST00000369984 FANCCQ00597 558 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 HAUS3Q68CZ6 603 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 CDAN1Q8IWY9 1227 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 CCDC105Q8IYK2 499 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 MICAL1Q8TDZ2 1067 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 HVCN1Q96D96 273 aa13.82□□□□□ -0.2
HCFC1-202ENST00000369984 CCDC125Q86Z20 511 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 MYRIPQ8NFW9 859 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 USTQ9Y2C2 406 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 RPRD2Q5VT52 1461 aaKnown RBP13.81□□□□□ -0.2
HCFC1-202ENST00000369984 KLHL7Q8IXQ5 586 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 BCRP11274 1271 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 PPP4R1Q8TF05 950 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 TTLL3Q9Y4R7 772 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 TOPBP1Q92547 1522 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 ADGRF5Q8IZF2 1346 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 LONRF3Q496Y0 759 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 DCUN1D2Q6PH85 259 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 PSPC1Q8WXF1 523 aaKnown RBP13.81□□□□□ -0.2
HCFC1-202ENST00000369984 SAP30BPQ9UHR5 308 aaKnown RBP13.81□□□□□ -0.2
HCFC1-202ENST00000369984 ALDH1L1O75891 902 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 IRX4P78413 519 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 GPCPD1Q9NPB8 672 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 CEP85Q6P2H3 762 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 ACSBG1Q96GR2 724 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
HCFC1-202ENST00000369984 OPHN1O60890 802 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 USP26Q9BXU7 913 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 RAB17Q9H0T7 212 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 ACEP12821 1306 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 DEXIO95424 95 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 INPP1P49441 399 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 ANO1Q5XXA6 986 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 RPAINQ86UA6 219 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 ZCRB1Q8TBF4 217 aaKnown RBP13.8□□□□□ -0.2
HCFC1-202ENST00000369984 BCAP29Q9UHQ4 241 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 ZNF202O95125 648 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 ZNF75DP51815 510 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 ANKRD20A3Q5VUR7 823 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 PIK3AP1Q6ZUJ8 805 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 PLEKHM2Q8IWE5 1019 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 PARP2Q9UGN5 583 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 TSKSQ9UJT2 592 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 CEP104O60308 925 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 GCNT3O95395 438 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 CHMLP26374 656 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 BIRC2Q13490 618 aa13.8□□□□□ -0.2
HCFC1-202ENST00000369984 PEX26Q7Z412 305 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms