RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CXCL11O14625 94 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 CYP2C8P10632 490 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 OSBPP22059 807 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 SPTY2D1Q68D10 685 aaPredicted RBP12.79□□□□□ -0.36
CLRN3-201ENST00000368671 GPAT2Q6NUI2 795 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 GADL1Q6ZQY3 521 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 ERICH6Q7L0X2 663 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 RAET1EQ8TD07 263 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 TRIM47Q96LD4 638 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 PARK7Q99497 189 aaKnown RBP12.79□□□□□ -0.36
CLRN3-201ENST00000368671 DDX4Q9NQI0 724 aaKnown RBP12.79□□□□□ -0.36
CLRN3-201ENST00000368671 PICK1Q9NRD5 415 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.79□□□□□ -0.36
CLRN3-201ENST00000368671 ZHX2Q9Y6X8 837 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
CLRN3-201ENST00000368671 MYPNQ86TC9 1320 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 PDE4DIPQ5VU43 2346 aa12.79□□□□□ -0.36
CLRN3-201ENST00000368671 PHF20L1A8MW92 1017 aa12.78□□□□□ -0.36
CLRN3-201ENST00000368671 PTPRAP18433 802 aa12.78□□□□□ -0.36
CLRN3-201ENST00000368671 HOXD10P28358 340 aa12.78□□□□□ -0.36
CLRN3-201ENST00000368671 MECOMQ03112 1051 aa12.78□□□□□ -0.36
CLRN3-201ENST00000368671 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
CLRN3-201ENST00000368671 FRAT1Q92837 279 aaPredicted RBP12.78□□□□□ -0.36
CLRN3-201ENST00000368671 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.78□□□□□ -0.36
CLRN3-201ENST00000368671 SRRDQ9UH36 339 aa12.78□□□□□ -0.36
CLRN3-201ENST00000368671 PTPRFP10586 1907 aa12.78□□□□□ -0.36
CLRN3-201ENST00000368671 ATAD5Q96QE3 1844 aa12.77□□□□□ -0.37
CLRN3-201ENST00000368671 A0A0G2JLL6 359 aaPredicted RBP12.77□□□□□ -0.37
CLRN3-201ENST00000368671 CCER2I3L3R5 266 aa12.77□□□□□ -0.37
CLRN3-201ENST00000368671 GRK4P32298 578 aa12.77□□□□□ -0.37
CLRN3-201ENST00000368671 FCGRTP55899 365 aa12.77□□□□□ -0.37
CLRN3-201ENST00000368671 MTX1Q13505 466 aa12.77□□□□□ -0.37
CLRN3-201ENST00000368671 MTFR1Q15390 333 aa12.77□□□□□ -0.37
CLRN3-201ENST00000368671 HABP4Q5JVS0 413 aaKnown RBP12.77□□□□□ -0.37
CLRN3-201ENST00000368671 PI16Q6UXB8 463 aa12.77□□□□□ -0.37
CLRN3-201ENST00000368671 FASTKD5Q7L8L6 764 aaKnown RBP12.77□□□□□ -0.37
CLRN3-201ENST00000368671 PRRT2Q7Z6L0 340 aaPredicted RBP12.77□□□□□ -0.37
CLRN3-201ENST00000368671 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.37
CLRN3-201ENST00000368671 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
CLRN3-201ENST00000368671 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
CLRN3-201ENST00000368671 HMG20BQ9P0W2 317 aa12.77□□□□□ -0.37
CLRN3-201ENST00000368671 GPR75-ASB3A0A0A6YYF3 556 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 IPO8O15397 1037 aaKnown RBP12.76□□□□□ -0.37
CLRN3-201ENST00000368671 BCAR3O75815 825 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 GNAI2P04899 355 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 BCRP11274 1271 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 TRIM27P14373 513 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 PRKCZQ05513 592 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 TBC1D9Q6ZT07 1266 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 SPATA5Q8NB90 893 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 RAI14Q9P0K7 980 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 BIN2Q9UBW5 565 aaPredicted RBP12.76□□□□□ -0.37
CLRN3-201ENST00000368671 AFG3L2Q9Y4W6 797 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 MAST2Q6P0Q8 1798 aa12.76□□□□□ -0.37
CLRN3-201ENST00000368671 PNMA6EA0A0J9YXQ4 647 aa12.75□□□□□ -0.37
CLRN3-201ENST00000368671 TRIM75PA6NK02 468 aa12.75□□□□□ -0.37
CLRN3-201ENST00000368671 CTNND1O60716 968 aaKnown RBP12.75□□□□□ -0.37
CLRN3-201ENST00000368671 LDHCP07864 332 aa12.75□□□□□ -0.37
CLRN3-201ENST00000368671 HTTP42858 3142 aa12.75□□□□□ -0.37
CLRN3-201ENST00000368671 RHBDL3P58872 404 aa12.75□□□□□ -0.37
CLRN3-201ENST00000368671 GSTO1P78417 241 aa12.75□□□□□ -0.37
CLRN3-201ENST00000368671 MAP3K10Q02779 954 aa12.75□□□□□ -0.37
CLRN3-201ENST00000368671 G3BP1Q13283 466 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLRN3-201ENST00000368671 ATF7IPQ6VMQ6 1270 aa12.75□□□□□ -0.37
CLRN3-201ENST00000368671 ZNF384Q8TF68 577 aa12.75□□□□□ -0.37
CLRN3-201ENST00000368671 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLRN3-201ENST00000368671 GABRQQ9UN88 632 aa12.75□□□□□ -0.37
CLRN3-201ENST00000368671 CCL5P13501 91 aa12.74□□□□□ -0.37
CLRN3-201ENST00000368671 ARID4AP29374 1257 aaPredicted RBP12.74□□□□□ -0.37
CLRN3-201ENST00000368671 UBXN2AP68543 259 aa12.74□□□□□ -0.37
CLRN3-201ENST00000368671 SMCR8Q8TEV9 937 aaPredicted RBP12.74□□□□□ -0.37
CLRN3-201ENST00000368671 NSUN4Q96CB9 384 aaKnown RBP12.74□□□□□ -0.37
CLRN3-201ENST00000368671 SHISA4Q96DD7 197 aa12.74□□□□□ -0.37
CLRN3-201ENST00000368671 LOC285556D6RIA3 1793 aa12.74□□□□□ -0.37
CLRN3-201ENST00000368671 MCAMP43121 646 aa12.73□□□□□ -0.37
CLRN3-201ENST00000368671 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
CLRN3-201ENST00000368671 RNF208Q9H0X6 261 aa12.73□□□□□ -0.37
CLRN3-201ENST00000368671 OSBPL5Q9H0X9 879 aaPredicted RBP12.73□□□□□ -0.37
CLRN3-201ENST00000368671 LRP2BPQ9P2M1 347 aa12.73□□□□□ -0.37
CLRN3-201ENST00000368671 AGTPBP1Q9UPW5 1226 aa12.73□□□□□ -0.37
CLRN3-201ENST00000368671 SLC45A1Q9Y2W3 748 aa12.73□□□□□ -0.37
CLRN3-201ENST00000368671 COL2A1P02458 1487 aaPredicted RBP12.72□□□□□ -0.37
CLRN3-201ENST00000368671 TNPO2O14787 897 aaKnown RBP12.72□□□□□ -0.37
CLRN3-201ENST00000368671 TBC1D12O60347 775 aa12.72□□□□□ -0.37
CLRN3-201ENST00000368671 UQCRFS1P1P0C7P4 283 aa12.72□□□□□ -0.37
CLRN3-201ENST00000368671 OS9Q13438 667 aaPredicted RBP12.72□□□□□ -0.37
CLRN3-201ENST00000368671 TTC39AQ5SRH9 613 aa12.72□□□□□ -0.37
CLRN3-201ENST00000368671 TREML2Q5T2D2 321 aa12.72□□□□□ -0.37
CLRN3-201ENST00000368671 TEX11Q8IYF3 940 aa12.72□□□□□ -0.37
CLRN3-201ENST00000368671 SLAIN1Q8ND83 568 aa12.72□□□□□ -0.37
CLRN3-201ENST00000368671 NKX2-3Q8TAU0 364 aa12.72□□□□□ -0.37
CLRN3-201ENST00000368671 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
CLRN3-201ENST00000368671 SNRKQ9NRH2 765 aa12.72□□□□□ -0.37
CLRN3-201ENST00000368671 RYDENQ9NUL5 291 aaKnown RBP12.72□□□□□ -0.37
CLRN3-201ENST00000368671 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
CLRN3-201ENST00000368671 CDK5RAP2Q96SN8 1893 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms