RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 LAMB1P07942 1786 aa16.6■□□□□ 0.25
TPM3-211ENST00000368531 UBE2Q2LH0YL09 131 aa16.6■□□□□ 0.25
TPM3-211ENST00000368531 PPP1R12BO60237 982 aaPredicted RBP16.6■□□□□ 0.25
TPM3-211ENST00000368531 C1QTNF8P60827 252 aa16.6■□□□□ 0.25
TPM3-211ENST00000368531 DCAF15Q66K64 600 aa16.6■□□□□ 0.25
TPM3-211ENST00000368531 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
TPM3-211ENST00000368531 HOOK2Q96ED9 719 aa16.6■□□□□ 0.25
TPM3-211ENST00000368531 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.6■□□□□ 0.25
TPM3-211ENST00000368531 COL2A1P02458 1487 aaPredicted RBP16.6■□□□□ 0.25
TPM3-211ENST00000368531 USP2O75604 605 aaPredicted RBP16.59■□□□□ 0.25
TPM3-211ENST00000368531 PTH1RQ03431 593 aa16.59■□□□□ 0.25
TPM3-211ENST00000368531 C12orf60Q5U649 245 aa16.59■□□□□ 0.25
TPM3-211ENST00000368531 GIMAP6Q6P9H5 292 aa16.59■□□□□ 0.25
TPM3-211ENST00000368531 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
TPM3-211ENST00000368531 DYNLL2Q96FJ2 89 aa16.59■□□□□ 0.25
TPM3-211ENST00000368531 ABT1Q9ULW3 272 aaKnown RBP16.59■□□□□ 0.25
TPM3-211ENST00000368531 MYH8P13535 1937 aa16.58■□□□□ 0.25
TPM3-211ENST00000368531 TMEM88BA6NKF7 163 aa16.58■□□□□ 0.24
TPM3-211ENST00000368531 FGAP02671 866 aa16.58■□□□□ 0.24
TPM3-211ENST00000368531 APLP1P51693 650 aa16.58■□□□□ 0.24
TPM3-211ENST00000368531 FOXP4Q8IVH2 680 aaPredicted RBP16.58■□□□□ 0.24
TPM3-211ENST00000368531 ZNF341Q9BYN7 854 aa16.58■□□□□ 0.24
TPM3-211ENST00000368531 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
TPM3-211ENST00000368531 ARPP21Q9UBL0 812 aaPredicted RBP16.58■□□□□ 0.24
TPM3-211ENST00000368531 SERPINB13Q9UIV8 391 aa16.58■□□□□ 0.24
TPM3-211ENST00000368531 PAPPA2Q9BXP8 1791 aa16.58■□□□□ 0.24
TPM3-211ENST00000368531 IREB2P48200 963 aaKnown RBP16.57■□□□□ 0.24
TPM3-211ENST00000368531 HAND2P61296 217 aa16.57■□□□□ 0.24
TPM3-211ENST00000368531 HTRA3P83110 453 aa16.57■□□□□ 0.24
TPM3-211ENST00000368531 ALX1Q15699 326 aa16.57■□□□□ 0.24
TPM3-211ENST00000368531 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
TPM3-211ENST00000368531 SLC44A5Q8NCS7 719 aa16.57■□□□□ 0.24
TPM3-211ENST00000368531 WRNIP1Q96S55 665 aa16.57■□□□□ 0.24
TPM3-211ENST00000368531 DSCC1Q9BVC3 393 aa16.57■□□□□ 0.24
TPM3-211ENST00000368531 OTOFQ9HC10 1997 aa16.57■□□□□ 0.24
TPM3-211ENST00000368531 INPP5BP32019 993 aa16.56■□□□□ 0.24
TPM3-211ENST00000368531 CTDSPL2Q05D32 466 aa16.56■□□□□ 0.24
TPM3-211ENST00000368531 PPARAQ07869 468 aa16.56■□□□□ 0.24
TPM3-211ENST00000368531 KLRG1Q96E93 195 aa16.56■□□□□ 0.24
TPM3-211ENST00000368531 DNAJC18Q9H819 358 aa16.56■□□□□ 0.24
TPM3-211ENST00000368531 HERC5Q9UII4 1024 aaKnown RBP16.56■□□□□ 0.24
TPM3-211ENST00000368531 ATAD5Q96QE3 1844 aa16.55■□□□□ 0.24
TPM3-211ENST00000368531 TBC1D12O60347 775 aa16.55■□□□□ 0.24
TPM3-211ENST00000368531 HUNKP57058 714 aa16.55■□□□□ 0.24
TPM3-211ENST00000368531 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
TPM3-211ENST00000368531 ZKSCAN4Q969J2 545 aaPredicted RBP16.55■□□□□ 0.24
TPM3-211ENST00000368531 EHD4Q9H223 541 aa16.55■□□□□ 0.24
TPM3-211ENST00000368531 CDK8P49336 464 aa16.54■□□□□ 0.24
TPM3-211ENST00000368531 FKBP1BP68106 108 aa16.54■□□□□ 0.24
TPM3-211ENST00000368531 MAP3K10Q02779 954 aa16.54■□□□□ 0.24
TPM3-211ENST00000368531 RRP1BQ14684 758 aaKnown RBP16.54■□□□□ 0.24
TPM3-211ENST00000368531 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
TPM3-211ENST00000368531 CLMNQ96JQ2 1002 aa16.54■□□□□ 0.24
TPM3-211ENST00000368531 LSG1Q9H089 658 aaKnown RBP16.54■□□□□ 0.24
TPM3-211ENST00000368531 INCENPQ9NQS7 918 aa16.54■□□□□ 0.24
TPM3-211ENST00000368531 CTNNA3Q9UI47 895 aa16.54■□□□□ 0.24
TPM3-211ENST00000368531 TLL2Q9Y6L7 1015 aa16.54■□□□□ 0.24
TPM3-211ENST00000368531 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
TPM3-211ENST00000368531 PHF20L1A8MW92 1017 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 ZNF213O14771 459 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 GDF11O95390 407 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 SLC3A2P08195 630 aaKnown RBP16.53■□□□□ 0.24
TPM3-211ENST00000368531 SHMT1P34896 483 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 GABPAQ06546 454 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 GRM1Q13255 1194 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 MAP3K11Q16584 847 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.53■□□□□ 0.24
TPM3-211ENST00000368531 SAPCD2Q86UD0 394 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 METTL16Q86W50 562 aaKnown RBP16.53■□□□□ 0.24
TPM3-211ENST00000368531 ANKRD13AQ8IZ07 590 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.53■□□□□ 0.24
TPM3-211ENST00000368531 ELP3Q9H9T3 547 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 MKNK2Q9HBH9 465 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 CREBZFQ9NS37 354 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 ZNF112Q9UJU3 913 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
TPM3-211ENST00000368531 CSADQ9Y600 493 aa16.53■□□□□ 0.24
TPM3-211ENST00000368531 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
TPM3-211ENST00000368531 DOCK1Q14185 1865 aa16.52■□□□□ 0.24
TPM3-211ENST00000368531 PRDM1O75626 825 aa16.52■□□□□ 0.24
TPM3-211ENST00000368531 HSPA6P17066 643 aa16.52■□□□□ 0.24
TPM3-211ENST00000368531 VGLL4Q14135 290 aa16.52■□□□□ 0.24
TPM3-211ENST00000368531 IMMTQ16891 758 aaKnown RBP16.52■□□□□ 0.24
TPM3-211ENST00000368531 SHROOM1Q2M3G4 852 aaPredicted RBP16.52■□□□□ 0.24
TPM3-211ENST00000368531 CERKLQ49MI3 558 aaPredicted RBP16.52■□□□□ 0.24
TPM3-211ENST00000368531 LDLRAD1Q5T700 205 aa16.52■□□□□ 0.24
TPM3-211ENST00000368531 C16orf86Q6ZW13 317 aa16.52■□□□□ 0.24
TPM3-211ENST00000368531 MAP4K1Q92918 833 aa16.52■□□□□ 0.24
TPM3-211ENST00000368531 SLC10A4Q96EP9 437 aa16.52■□□□□ 0.24
TPM3-211ENST00000368531 TOMM22Q9NS69 142 aa16.52■□□□□ 0.24
TPM3-211ENST00000368531 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.52■□□□□ 0.24
TPM3-211ENST00000368531 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
TPM3-211ENST00000368531 ZMYM6O95789 1325 aa16.51■□□□□ 0.23
TPM3-211ENST00000368531 MPHOSPH10O00566 681 aaKnown RBP16.51■□□□□ 0.23
TPM3-211ENST00000368531 REC8O95072 547 aa16.51■□□□□ 0.23
TPM3-211ENST00000368531 ZNF157P51786 506 aaPredicted RBP16.51■□□□□ 0.23
TPM3-211ENST00000368531 JAG1P78504 1218 aa16.51■□□□□ 0.23
TPM3-211ENST00000368531 RRP12Q5JTH9 1297 aaKnown RBP16.51■□□□□ 0.23
TPM3-211ENST00000368531 TATDN1Q6P1N9 297 aa16.51■□□□□ 0.23
TPM3-211ENST00000368531 TACC3Q9Y6A5 838 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms