RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GAKO14976 1311 aa12.08□□□□□ -0.48
TPM3-210ENST00000368530 SEMA3EO15041 775 aa12.08□□□□□ -0.48
TPM3-210ENST00000368530 RAB11FIP3O75154 756 aa12.08□□□□□ -0.48
TPM3-210ENST00000368530 CYP2C8P10632 490 aa12.08□□□□□ -0.48
TPM3-210ENST00000368530 ADORA1P30542 326 aa12.08□□□□□ -0.48
TPM3-210ENST00000368530 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.48
TPM3-210ENST00000368530 FAM163AQ96GL9 167 aaPredicted RBP12.08□□□□□ -0.48
TPM3-210ENST00000368530 IPO9Q96P70 1041 aaKnown RBP12.08□□□□□ -0.48
TPM3-210ENST00000368530 AFG3L2Q9Y4W6 797 aa12.08□□□□□ -0.48
TPM3-210ENST00000368530 A0A0G2JLL6 359 aaPredicted RBP12.07□□□□□ -0.48
TPM3-210ENST00000368530 ENTPD3O75355 529 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 GRK4P32298 578 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 PDE1AP54750 535 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 HSP90AB4PQ58FF6 505 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 CCDC102BQ68D86 513 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 PRRT2Q7Z6L0 340 aaPredicted RBP12.07□□□□□ -0.48
TPM3-210ENST00000368530 ZNF384Q8TF68 577 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 UPF2Q9HAU5 1272 aaKnown RBP12.07□□□□□ -0.48
TPM3-210ENST00000368530 COPRSQ9NQ92 184 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 DDX4Q9NQI0 724 aaKnown RBP12.07□□□□□ -0.48
TPM3-210ENST00000368530 DENND2AQ9ULE3 1009 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.07□□□□□ -0.48
TPM3-210ENST00000368530 ZHX2Q9Y6X8 837 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 CEP290O15078 2479 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 AK9Q5TCS8 1911 aa12.07□□□□□ -0.48
TPM3-210ENST00000368530 RANBP2P49792 3224 aaKnown RBP12.07□□□□□ -0.48
TPM3-210ENST00000368530 DDTLA6NHG4 134 aaPredicted RBP12.06□□□□□ -0.48
TPM3-210ENST00000368530 FMNL1O95466 1100 aaPredicted RBP12.06□□□□□ -0.48
TPM3-210ENST00000368530 GJB1P08034 283 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 PTPRAP18433 802 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 MX1P20591 662 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 IL15P40933 162 aaPredicted RBP12.06□□□□□ -0.48
TPM3-210ENST00000368530 GJA8P48165 433 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 TIMM10P62072 90 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 PRKCZQ05513 592 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 RASGRF1Q13972 1273 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 SCYL3Q8IZE3 742 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 KIF1BPQ96EK5 621 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
TPM3-210ENST00000368530 GABRQQ9UN88 632 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 MYPNQ86TC9 1320 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 SZT2Q5T011 3432 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 CDC45O75419 566 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 CCL5P13501 91 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 HOXD10P28358 340 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 TBC1D9Q6ZT07 1266 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 RAET1EQ8TD07 263 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 PARK7Q99497 189 aaKnown RBP12.06□□□□□ -0.48
TPM3-210ENST00000368530 PRO3102Q9H379 93 aa12.06□□□□□ -0.48
TPM3-210ENST00000368530 NOP58Q9Y2X3 529 aaKnown RBP12.06□□□□□ -0.48
TPM3-210ENST00000368530 PDS5AQ29RF7 1337 aaKnown RBP12.05□□□□□ -0.48
TPM3-210ENST00000368530 SALL3Q9BXA9 1300 aa12.05□□□□□ -0.48
TPM3-210ENST00000368530 SDSP20132 328 aa12.05□□□□□ -0.48
TPM3-210ENST00000368530 RHBDL3P58872 404 aa12.05□□□□□ -0.48
TPM3-210ENST00000368530 G3BP1Q13283 466 aaKnown RBP eCLIP12.05□□□□□ -0.488e-7■■□□□ 13.8
TPM3-210ENST00000368530 SLC45A1Q9Y2W3 748 aa12.05□□□□□ -0.48
TPM3-210ENST00000368530 CTNND1O60716 968 aaKnown RBP12.04□□□□□ -0.48
TPM3-210ENST00000368530 FASTKD5Q7L8L6 764 aaKnown RBP12.04□□□□□ -0.48
TPM3-210ENST00000368530 ERC1Q8IUD2 1116 aa12.04□□□□□ -0.48
TPM3-210ENST00000368530 NKX2-3Q8TAU0 364 aa12.04□□□□□ -0.48
TPM3-210ENST00000368530 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
TPM3-210ENST00000368530 OSBPL3Q9H4L5 887 aa12.04□□□□□ -0.48
TPM3-210ENST00000368530 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.04□□□□□ -0.48
TPM3-210ENST00000368530 TRIOBPQ9H2D6 2365 aa12.04□□□□□ -0.48
TPM3-210ENST00000368530 MYH13Q9UKX3 1938 aa12.03□□□□□ -0.48
TPM3-210ENST00000368530 GPR75-ASB3A0A0A6YYF3 556 aa12.03□□□□□ -0.48
TPM3-210ENST00000368530 FCGRTP55899 365 aa12.03□□□□□ -0.48
TPM3-210ENST00000368530 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
TPM3-210ENST00000368530 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
TPM3-210ENST00000368530 IFNLR1Q8IU57 520 aaPredicted RBP12.03□□□□□ -0.48
TPM3-210ENST00000368530 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
TPM3-210ENST00000368530 ZGPATQ8N5A5 531 aaKnown RBP12.03□□□□□ -0.48
TPM3-210ENST00000368530 U2AF1L4Q8WU68 220 aaKnown RBP12.03□□□□□ -0.48
TPM3-210ENST00000368530 TBC1D32Q96NH3 1257 aa12.03□□□□□ -0.48
TPM3-210ENST00000368530 RNF208Q9H0X6 261 aa12.03□□□□□ -0.48
TPM3-210ENST00000368530 UNC93B1Q9H1C4 597 aa12.03□□□□□ -0.48
TPM3-210ENST00000368530 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
TPM3-210ENST00000368530 A0A1B0GUL7 405 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 TBC1D12O60347 775 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 SGPL1O95470 568 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 BTDP43251 543 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 FLT3LGP49771 235 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 MECOMQ03112 1051 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 TFCP2Q12800 502 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 ERICH6Q7L0X2 663 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 CLASRPQ8N2M8 674 aaKnown RBP12.02□□□□□ -0.48
TPM3-210ENST00000368530 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 PXYLP1Q8TE99 480 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 XAGE2Q96GT9 111 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 C22orf23Q9BZE7 217 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 PICK1Q9NRD5 415 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 ABCF2Q9UG63 623 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 STAP2Q9UGK3 403 aa12.02□□□□□ -0.48
TPM3-210ENST00000368530 MROH7-TTC4A0A0A0MT08 1334 aa12.02□□□□□ -0.49
TPM3-210ENST00000368530 TRIM6-TRIM34B2RNG4 842 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 ADCY3O60266 1144 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
TPM3-210ENST00000368530 ELNP15502 786 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 UBXN2AP68543 259 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms