RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 IMPG2Q9BZV3 1241 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 FEM1BQ9UK73 627 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 ADGRB1O14514 1584 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 PXDNQ92626 1479 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.48□□□□□ -0.89
SSR2-202ENST00000368311 PTPDC1A2A3K4 754 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 USP17L15C9J2P7 530 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 USP17L13C9JLJ4 530 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 USP17L11C9JVI0 530 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 USP17L18D6R9N7 530 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 USP17L22D6RA61 530 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 USP17L17D6RBQ6 530 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 USP17L19D6RCP7 530 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 USP17L20D6RJB6 530 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 CRKP46108 304 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 USP17L24Q0WX57 530 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 NOGQ13253 232 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 TFDP1Q14186 410 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 HHIPL2Q6UWX4 724 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 DCAF4Q8WV16 495 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 ZHX3Q9H4I2 956 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 SERPINA10Q9UK55 444 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 LRFN2Q9ULH4 789 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 PRC1O43663 620 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 PRKG1Q13976 671 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 KRT25Q7Z3Z0 450 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 BICD1Q96G01 975 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 ZNF277Q9NRM2 450 aaPredicted RBP9.48□□□□□ -0.89
SSR2-202ENST00000368311 A0A0G2JLW4 131 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 H7C1W4 665 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 GCOM1H8Y6P7 765 aaPredicted RBP9.47□□□□□ -0.89
SSR2-202ENST00000368311 POLR2MP0CAP2 368 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 NEK4P51957 841 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 KRT85P78386 507 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 SUCLG2Q96I99 432 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 IWS1Q96ST2 819 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 ISCA1Q9BUE6 129 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 ZNHIT6Q9NWK9 470 aaKnown RBP9.47□□□□□ -0.89
SSR2-202ENST00000368311 FLOT1O75955 427 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 SSBP05455 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
SSR2-202ENST00000368311 AOC3Q16853 763 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 SLC10A5Q5PT55 438 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 ARHGEF16Q5VV41 709 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 TEX2Q8IWB9 1127 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 STK11IPQ8N1F8 1099 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 KATNAL1Q9BW62 490 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 MLXIPQ9HAP2 919 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 DDAH1O94760 285 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 CAMTA2O94983 1202 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 CCND2P30279 289 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 KBTBD3Q8NAB2 608 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 TGFBRAP1Q8WUH2 860 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 IQSEC3Q9UPP2 1182 aaPredicted RBP9.47□□□□□ -0.89
SSR2-202ENST00000368311 MBD3O95983 291 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 SLC8A3P57103 927 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 BEND3Q5T5X7 828 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 SEZ6LQ9BYH1 1024 aa9.47□□□□□ -0.89
SSR2-202ENST00000368311 GNRH1P01148 92 aa9.46□□□□□ -0.89
SSR2-202ENST00000368311 NOP2P46087 812 aaKnown RBP9.46□□□□□ -0.89
SSR2-202ENST00000368311 SPOUT1Q5T280 376 aaKnown RBP9.46□□□□□ -0.89
SSR2-202ENST00000368311 ZNF34Q8IZ26 560 aa9.46□□□□□ -0.89
SSR2-202ENST00000368311 SAMD3Q8N6K7 520 aa9.46□□□□□ -0.89
SSR2-202ENST00000368311 FHDC1Q9C0D6 1143 aaPredicted RBP9.46□□□□□ -0.89
SSR2-202ENST00000368311 AATFQ9NY61 560 aaKnown RBP eCLIP9.46□□□□□ -0.89
SSR2-202ENST00000368311 FAM208AQ9UK61 1670 aaKnown RBP9.46□□□□□ -0.89
SSR2-202ENST00000368311 CCP110O43303 1012 aa9.46□□□□□ -0.89
SSR2-202ENST00000368311 ADCY7P51828 1080 aa9.46□□□□□ -0.89
SSR2-202ENST00000368311 BMP2KLQ5H9B9 411 aa9.46□□□□□ -0.89
SSR2-202ENST00000368311 HEATR3Q7Z4Q2 680 aa9.46□□□□□ -0.89
SSR2-202ENST00000368311 FAM193BQ96PV7 902 aaPredicted RBP9.46□□□□□ -0.89
SSR2-202ENST00000368311 DSCC1Q9BVC3 393 aa9.46□□□□□ -0.89
SSR2-202ENST00000368311 MED23Q9ULK4 1368 aa9.46□□□□□ -0.89
SSR2-202ENST00000368311 RBM25P49756 843 aaKnown RBP9.46□□□□□ -0.9
SSR2-202ENST00000368311 VPS36Q86VN1 386 aa9.46□□□□□ -0.9
SSR2-202ENST00000368311 LPAR1Q92633 364 aa9.46□□□□□ -0.9
SSR2-202ENST00000368311 POTEB2H3BUK9 544 aa9.46□□□□□ -0.9
SSR2-202ENST00000368311 TNPO2O14787 897 aaKnown RBP9.46□□□□□ -0.9
SSR2-202ENST00000368311 CBFA2T2O43439 604 aa9.46□□□□□ -0.9
SSR2-202ENST00000368311 TTLL1O95922 423 aa9.46□□□□□ -0.9
SSR2-202ENST00000368311 CCDC102BQ68D86 513 aa9.46□□□□□ -0.9
SSR2-202ENST00000368311 CEP85Q6P2H3 762 aa9.46□□□□□ -0.9
SSR2-202ENST00000368311 SAP30BPQ9UHR5 308 aaKnown RBP9.46□□□□□ -0.9
SSR2-202ENST00000368311 MEIS3Q99687 375 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 DCTPP1Q9H773 170 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 SLIT3O75094 1523 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 DCDC2CA8MYV0 355 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 KPNA6O60684 536 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 ATF7P17544 494 aaPredicted RBP9.45□□□□□ -0.9
SSR2-202ENST00000368311 TTC22Q5TAA0 569 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 NBPF15Q8N660 670 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 SERPINB13Q9UIV8 391 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 KRT79Q5XKE5 535 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 ANKRD23Q86SG2 305 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 FAM177A1Q8N128 213 aaPredicted RBP9.45□□□□□ -0.9
SSR2-202ENST00000368311 ARRDC4Q8NCT1 418 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 FAM167AQ96KS9 214 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 SASH1O94885 1247 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 KRT2P35908 639 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 TBC1D10BQ4KMP7 808 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms