RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SLC27A2O14975 620 aa13.46□□□□□ -0.25
USF1-201ENST00000368019 AP5Z1O43299 807 aa13.46□□□□□ -0.25
USF1-201ENST00000368019 ADCK5Q3MIX3 580 aa13.46□□□□□ -0.25
USF1-201ENST00000368019 TTLL5Q6EMB2 1281 aa13.46□□□□□ -0.25
USF1-201ENST00000368019 OGFOD1Q8N543 542 aa13.46□□□□□ -0.25
USF1-201ENST00000368019 LINS1Q8NG48 757 aa13.46□□□□□ -0.25
USF1-201ENST00000368019 ZNF830Q96NB3 372 aaPredicted RBP13.46□□□□□ -0.25
USF1-201ENST00000368019 KCND1Q9NSA2 647 aa13.46□□□□□ -0.25
USF1-201ENST00000368019 PYCARDQ9ULZ3 195 aa13.46□□□□□ -0.25
USF1-201ENST00000368019 VPS37CA5D8V6 355 aaPredicted RBP13.45□□□□□ -0.26
USF1-201ENST00000368019 RIOK3O14730 519 aaKnown RBP13.45□□□□□ -0.26
USF1-201ENST00000368019 SLC34A2O95436 690 aa13.45□□□□□ -0.26
USF1-201ENST00000368019 ZSCAN20P17040 1043 aaPredicted RBP13.45□□□□□ -0.26
USF1-201ENST00000368019 ZNF75DP51815 510 aa13.45□□□□□ -0.26
USF1-201ENST00000368019 FAM193AP78312 1265 aa13.45□□□□□ -0.26
USF1-201ENST00000368019 FOXD4L6Q3SYB3 417 aaPredicted RBP13.45□□□□□ -0.26
USF1-201ENST00000368019 FOXD4L3Q6VB84 417 aaPredicted RBP13.45□□□□□ -0.26
USF1-201ENST00000368019 LLPHQ9BRT6 129 aaKnown RBP13.45□□□□□ -0.26
USF1-201ENST00000368019 TPCN1Q9ULQ1 816 aa13.45□□□□□ -0.26
USF1-201ENST00000368019 LAMB1P07942 1786 aa13.45□□□□□ -0.26
USF1-201ENST00000368019 MAP4K4O95819 1239 aaPredicted RBP13.44□□□□□ -0.26
USF1-201ENST00000368019 TM4SF4P48230 202 aa13.44□□□□□ -0.26
USF1-201ENST00000368019 FOXO4P98177 505 aa13.44□□□□□ -0.26
USF1-201ENST00000368019 CHRNDQ07001 517 aa13.44□□□□□ -0.26
USF1-201ENST00000368019 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
USF1-201ENST00000368019 CTU1Q7Z7A3 348 aaKnown RBP13.44□□□□□ -0.26
USF1-201ENST00000368019 LEO1Q8WVC0 666 aaPredicted RBP13.44□□□□□ -0.26
USF1-201ENST00000368019 MRFAP1L1Q96HT8 127 aa13.44□□□□□ -0.26
USF1-201ENST00000368019 SPATA32Q96LK8 384 aa13.44□□□□□ -0.26
USF1-201ENST00000368019 MPHOSPH8Q99549 860 aa13.44□□□□□ -0.26
USF1-201ENST00000368019 CBX8Q9HC52 389 aa13.44□□□□□ -0.26
USF1-201ENST00000368019 CD209Q9NNX6 404 aa13.44□□□□□ -0.26
USF1-201ENST00000368019 GOLGA6L4A6NEF3 574 aa13.43□□□□□ -0.26
USF1-201ENST00000368019 KIF2AO00139 706 aaPredicted RBP13.43□□□□□ -0.26
USF1-201ENST00000368019 SASH1O94885 1247 aa13.43□□□□□ -0.26
USF1-201ENST00000368019 GTF2IP78347 998 aa13.43□□□□□ -0.26
USF1-201ENST00000368019 NMIQ13287 307 aaPredicted RBP13.43□□□□□ -0.26
USF1-201ENST00000368019 LDLRAD1Q5T700 205 aa13.43□□□□□ -0.26
USF1-201ENST00000368019 RGS22Q8NE09 1264 aa13.43□□□□□ -0.26
USF1-201ENST00000368019 FBXW7Q969H0 707 aa13.43□□□□□ -0.26
USF1-201ENST00000368019 C9orf78Q9NZ63 289 aaPredicted RBP13.43□□□□□ -0.26
USF1-201ENST00000368019 CGNQ9P2M7 1197 aaKnown RBP13.43□□□□□ -0.26
USF1-201ENST00000368019 CFAP45Q9UL16 551 aa13.43□□□□□ -0.26
USF1-201ENST00000368019 LAMA4Q16363 1823 aa13.43□□□□□ -0.26
USF1-201ENST00000368019 ANKRD18BA2A2Z9 1011 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 SNAP23O00161 211 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 TUBB4AP04350 444 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 LIG1P18858 919 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 KCNJ4P48050 445 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 PTPN12Q05209 780 aaKnown RBP13.42□□□□□ -0.26
USF1-201ENST00000368019 GABPB1Q06547 395 aaPredicted RBP13.42□□□□□ -0.26
USF1-201ENST00000368019 RESTQ13127 1097 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 G3BP1Q13283 466 aaKnown RBP eCLIP13.42□□□□□ -0.26
USF1-201ENST00000368019 NOM1Q5C9Z4 860 aaKnown RBP13.42□□□□□ -0.26
USF1-201ENST00000368019 PPP4R3BQ5MIZ7 849 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 NAA16Q6N069 864 aaPredicted RBP13.42□□□□□ -0.26
USF1-201ENST00000368019 AACSQ86V21 672 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 CREBRFQ8IUR6 639 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 APOBEC3FQ8IUX4 373 aaKnown RBP13.42□□□□□ -0.26
USF1-201ENST00000368019 KIAA0825Q8IV33 1275 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 CERS5Q8N5B7 392 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 MTMR14Q8NCE2 650 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 OGFRQ9NZT2 677 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 HDAC9Q9UKV0 1011 aa13.42□□□□□ -0.26
USF1-201ENST00000368019 GRM8O00222 908 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 TBC1D8O95759 1140 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 IL1R1P14778 569 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 PTGS1P23219 599 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 NF2P35240 595 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 TOB2Q14106 344 aaPredicted RBP13.41□□□□□ -0.26
USF1-201ENST00000368019 ANO6Q4KMQ2 910 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 TAF3Q5VWG9 929 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 GTF3C6Q969F1 213 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 CFHR5Q9BXR6 569 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 DACT1Q9NYF0 836 aa13.41□□□□□ -0.26
USF1-201ENST00000368019 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
USF1-201ENST00000368019 COL1A1P02452 1464 aaPredicted RBP13.41□□□□□ -0.26
USF1-201ENST00000368019 TAF5LO75529 589 aa13.4□□□□□ -0.26
USF1-201ENST00000368019 HMGB1P09429 215 aaKnown RBP13.4□□□□□ -0.26
USF1-201ENST00000368019 CPA1P15085 419 aa13.4□□□□□ -0.26
USF1-201ENST00000368019 KCNJ6P48051 423 aa13.4□□□□□ -0.26
USF1-201ENST00000368019 ZNF165P49910 485 aa13.4□□□□□ -0.26
USF1-201ENST00000368019 TTLL12Q14166 644 aaPredicted RBP13.4□□□□□ -0.26
USF1-201ENST00000368019 EPHA10Q5JZY3 1008 aa13.4□□□□□ -0.26
USF1-201ENST00000368019 CCDC186Q7Z3E2 898 aa13.4□□□□□ -0.26
USF1-201ENST00000368019 ARMC9Q7Z3E5 817 aa13.4□□□□□ -0.26
USF1-201ENST00000368019 HELBQ8NG08 1087 aaPredicted RBP13.4□□□□□ -0.26
USF1-201ENST00000368019 SMARCC2Q8TAQ2 1214 aa13.4□□□□□ -0.26
USF1-201ENST00000368019 ZNF296Q8WUU4 475 aaPredicted RBP13.4□□□□□ -0.26
USF1-201ENST00000368019 ATP5JP18859 108 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 SOX10P56693 466 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 FKBP1AP62942 108 aaKnown RBP13.39□□□□□ -0.27
USF1-201ENST00000368019 IFIT5Q13325 482 aaKnown RBP13.39□□□□□ -0.27
USF1-201ENST00000368019 DLGAP5Q15398 846 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 PKN2Q16513 984 aaKnown RBP13.39□□□□□ -0.27
USF1-201ENST00000368019 STX1AQ16623 288 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 SLFNL1Q499Z3 407 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 SPRYD7Q5W111 196 aa13.39□□□□□ -0.27
USF1-201ENST00000368019 C17orf53Q8N3J3 647 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms