RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 AK2P54819 239 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 RHBDL3P58872 404 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 TOB2Q14106 344 aaPredicted RBP11.28□□□□□ -0.6
VTA1-201ENST00000367621 IMMTQ16891 758 aaKnown RBP11.28□□□□□ -0.6
VTA1-201ENST00000367621 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 USP17L1Q7RTZ2 530 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 MB21D2Q8IYB1 491 aaPredicted RBP11.28□□□□□ -0.6
VTA1-201ENST00000367621 SH3RF3Q8TEJ3 882 aaPredicted RBP11.28□□□□□ -0.6
VTA1-201ENST00000367621 TMX3Q96JJ7 454 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 DCP1AQ9NPI6 582 aaPredicted RBP11.28□□□□□ -0.6
VTA1-201ENST00000367621 PDRG1Q9NUG6 133 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 DAGLAQ9Y4D2 1042 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 ZNF213O14771 459 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 PTPREP23469 700 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 BTDP43251 543 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 PTPN5P54829 565 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 ANTXR2P58335 489 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 CUL4AQ13619 759 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 CTR9Q6PD62 1173 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 BLOC1S2Q6QNY1 142 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 TCEANC2Q96MN5 208 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 GMLQ99445 158 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 MRIQ9BWK5 157 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 NAPBQ9H115 298 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 INCENPQ9NQS7 918 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 ANAPC4Q9UJX5 808 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
VTA1-201ENST00000367621 CYP2D7A0A087X1C5 515 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 F8W031 263 aaPredicted RBP11.26□□□□□ -0.61
VTA1-201ENST00000367621 VIL1P09327 827 aaKnown RBP11.26□□□□□ -0.61
VTA1-201ENST00000367621 FGRP09769 529 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 IARSP41252 1262 aaKnown RBP11.26□□□□□ -0.61
VTA1-201ENST00000367621 MCM2P49736 904 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 CTDSPL2Q05D32 466 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 PPP1R15BQ5SWA1 713 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 APOBEC3HQ6NTF7 200 aaKnown RBP11.26□□□□□ -0.61
VTA1-201ENST00000367621 HHIPL2Q6UWX4 724 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 DHX32Q7L7V1 743 aaKnown RBP11.26□□□□□ -0.61
VTA1-201ENST00000367621 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 FBXL16Q8N461 479 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 FBXW7Q969H0 707 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 LARP6Q9BRS8 491 aaKnown RBP11.26□□□□□ -0.61
VTA1-201ENST00000367621 AGXT2Q9BYV1 514 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 CRNKL1Q9BZJ0 848 aaKnown RBP11.26□□□□□ -0.61
VTA1-201ENST00000367621 NACAP1Q9BZK3 213 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 FHDC1Q9C0D6 1143 aaPredicted RBP11.26□□□□□ -0.61
VTA1-201ENST00000367621 ATP8A2Q9NTI2 1148 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 TTF2Q9UNY4 1162 aaKnown RBP11.26□□□□□ -0.61
VTA1-201ENST00000367621 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
VTA1-201ENST00000367621 CHD4Q14839 1912 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 USP17L12C9JPN9 530 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 USP17L21D6R901 530 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 PSMD14O00487 310 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 LARGE1O95461 756 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 BAG3O95817 575 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 HMGB1P09429 215 aaKnown RBP11.25□□□□□ -0.61
VTA1-201ENST00000367621 CYP2D6P10635 497 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 TDO2P48775 406 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 SCNN1DP51172 638 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 HDLBPQ00341 1268 aaKnown RBP11.25□□□□□ -0.61
VTA1-201ENST00000367621 PPARAQ07869 468 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 ST3GAL1Q11201 340 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 SBK1Q52WX2 424 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 STAG1Q8WVM7 1258 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 TAOK3Q9H2K8 898 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 TPCN1Q9ULQ1 816 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 ZNRF3Q9ULT6 936 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 LIMCH1Q9UPQ0 1083 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 PCDHAC2Q9Y5I4 1007 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 NEDD4P46934 1319 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 MYH7P12883 1935 aa11.25□□□□□ -0.61
VTA1-201ENST00000367621 MAST2Q6P0Q8 1798 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 RAD17O75943 681 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 CRKP46108 304 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 ME3Q16798 604 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 AKNAD1Q5T1N1 836 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 RSBN1LQ6PCB5 846 aaPredicted RBP11.24□□□□□ -0.61
VTA1-201ENST00000367621 NOL8Q76FK4 1167 aaKnown RBP11.24□□□□□ -0.61
VTA1-201ENST00000367621 CYB5R4Q7L1T6 521 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 KIAA0825Q8IV33 1275 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 TGFBRAP1Q8WUH2 860 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 ZDHHC15Q96MV8 337 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 LRRC2Q9BYS8 371 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 WDR70Q9NW82 654 aa11.24□□□□□ -0.61
VTA1-201ENST00000367621 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
VTA1-201ENST00000367621 WDHD1O75717 1129 aaPredicted RBP11.23□□□□□ -0.61
VTA1-201ENST00000367621 USP17L8P0C7I0 530 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 EVCP57679 992 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 RASSF7Q02833 373 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 CXCL9Q07325 125 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 C12orf60Q5U649 245 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 CDC42EP5Q6NZY7 148 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 Q6ZUG5 572 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 CERS3Q8IU89 383 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 NCOA7Q8NI08 942 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms