RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 CSRNP1Q96S65 589 aa11.9□□□□□ -0.5
NUP43-202ENST00000367402 CRNKL1Q9BZJ0 848 aaKnown RBP11.9□□□□□ -0.5
NUP43-202ENST00000367402 PUS7LQ9H0K6 701 aaKnown RBP11.9□□□□□ -0.5
NUP43-202ENST00000367402 ARMT1Q9H993 441 aa11.9□□□□□ -0.5
NUP43-202ENST00000367402 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
NUP43-202ENST00000367402 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
NUP43-202ENST00000367402 DDTLA6NHG4 134 aaPredicted RBP11.89□□□□□ -0.51
NUP43-202ENST00000367402 RASSF10A6NK89 507 aa11.89□□□□□ -0.51
NUP43-202ENST00000367402 USP2O75604 605 aaPredicted RBP11.89□□□□□ -0.51
NUP43-202ENST00000367402 PSEN1P49768 467 aa11.89□□□□□ -0.51
NUP43-202ENST00000367402 ZNF157P51786 506 aaPredicted RBP11.89□□□□□ -0.51
NUP43-202ENST00000367402 DCAF15Q66K64 600 aa11.89□□□□□ -0.51
NUP43-202ENST00000367402 SH3BP5LQ7L8J4 393 aa11.89□□□□□ -0.51
NUP43-202ENST00000367402 APPBP2Q92624 585 aa11.89□□□□□ -0.51
NUP43-202ENST00000367402 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
NUP43-202ENST00000367402 OSBPL5Q9H0X9 879 aaPredicted RBP11.89□□□□□ -0.51
NUP43-202ENST00000367402 SAP30BPQ9UHR5 308 aaKnown RBP11.89□□□□□ -0.51
NUP43-202ENST00000367402 FLT1P17948 1338 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 MYH2Q9UKX2 1941 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 TTC22Q5TAA0 569 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 CYP4F22Q6NT55 531 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 RGMBQ6NW40 437 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 DNAJC5GQ8N7S2 189 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 OSBP2Q969R2 916 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 HHIPL1Q96JK4 782 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 DHX36Q9H2U1 1008 aaKnown RBP11.88□□□□□ -0.51
NUP43-202ENST00000367402 PALD1Q9ULE6 856 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 SLC4A4Q9Y6R1 1079 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 POLR2AP24928 1970 aaKnown RBP11.88□□□□□ -0.51
NUP43-202ENST00000367402 RFX7Q2KHR2 1363 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 RPAP1Q9BWH6 1393 aaPredicted RBP11.88□□□□□ -0.51
NUP43-202ENST00000367402 SSC5DA1L4H1 1573 aa11.88□□□□□ -0.51
NUP43-202ENST00000367402 MAST2Q6P0Q8 1798 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 PRKAB2O43741 272 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 ECE1P42892 770 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 VEGFBP49765 207 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 MAP3K11Q16584 847 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 SLC4A8Q2Y0W8 1093 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 SKAP1Q86WV1 359 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 SDR42E1Q8WUS8 393 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 CCDC102AQ96A19 550 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 KLRG1Q96E93 195 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 SLC10A4Q96EP9 437 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 CAPNS2Q96L46 248 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 SEC62Q99442 399 aaKnown RBP11.87□□□□□ -0.51
NUP43-202ENST00000367402 ZNF341Q9BYN7 854 aa11.87□□□□□ -0.51
NUP43-202ENST00000367402 M0R2C6 588 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 POLR3DP05423 398 aaPredicted RBP11.86□□□□□ -0.51
NUP43-202ENST00000367402 HLA-DOAP06340 250 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 ZMYM1Q5SVZ6 1142 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 LDLRAD1Q5T700 205 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 DDRGK1Q96HY6 314 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 CLMNQ96JQ2 1002 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 WRNIP1Q96S55 665 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 STRBPQ96SI9 672 aaKnown RBP11.86□□□□□ -0.51
NUP43-202ENST00000367402 TRIM34Q9BYJ4 488 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.86□□□□□ -0.51
NUP43-202ENST00000367402 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
NUP43-202ENST00000367402 ATP8A2Q9NTI2 1148 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 MCM9Q9NXL9 1143 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 PI4KBQ9UBF8 816 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 ECM29Q5VYK3 1845 aa11.86□□□□□ -0.51
NUP43-202ENST00000367402 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
NUP43-202ENST00000367402 ATRNL1Q5VV63 1379 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 GPAA1O43292 621 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 APPP05067 770 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 SLURP2P0DP57 97 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
NUP43-202ENST00000367402 SDSP20132 328 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 EMP3P54852 163 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 TTC6Q86TZ1 520 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 TICAM2Q86XR7 235 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 FOXP4Q8IVH2 680 aaPredicted RBP11.85□□□□□ -0.51
NUP43-202ENST00000367402 SPNS2Q8IVW8 549 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
NUP43-202ENST00000367402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.85□□□□□ -0.51
NUP43-202ENST00000367402 HELLSQ9NRZ9 838 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 CSADQ9Y600 493 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 DOCK2Q92608 1830 aa11.85□□□□□ -0.51
NUP43-202ENST00000367402 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
NUP43-202ENST00000367402 UNCXA6NJT0 531 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 TBC1D12O60347 775 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 GNAT2P19087 354 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 INPP5BP32019 993 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 NMIQ13287 307 aaPredicted RBP11.84□□□□□ -0.51
NUP43-202ENST00000367402 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
NUP43-202ENST00000367402 VGLL4Q14135 290 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 CCDC129Q6ZRS4 1044 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.84□□□□□ -0.51
NUP43-202ENST00000367402 AMOTL1Q8IY63 956 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 ZKSCAN4Q969J2 545 aaPredicted RBP11.84□□□□□ -0.51
NUP43-202ENST00000367402 FAM227BQ96M60 508 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 ELP3Q9H9T3 547 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 DIAPH3Q9NSV4 1193 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 PAPPA2Q9BXP8 1791 aa11.84□□□□□ -0.51
NUP43-202ENST00000367402 TRPM7Q96QT4 1865 aa11.83□□□□□ -0.52
NUP43-202ENST00000367402 A0A0D9SFI3 127 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms