RNA–Protein interactions for RNA: ENST00000366684.7

ACTA1-202, Transcript of actin, alpha 1, skeletal muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTA1, Length 1,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1-202ENST00000366684 OPTNQ96CV9 577 aa17.75■□□□□ 0.43
ACTA1-202ENST00000366684 IPO9Q96P70 1041 aaKnown RBP17.75■□□□□ 0.43
ACTA1-202ENST00000366684 MAGEB6P1A0A0J9YX57 407 aa17.74■□□□□ 0.43
ACTA1-202ENST00000366684 SPDYE5A6NIY4 337 aa17.74■□□□□ 0.43
ACTA1-202ENST00000366684 INPP5BP32019 993 aa17.74■□□□□ 0.43
ACTA1-202ENST00000366684 ADD2P35612 726 aa17.74■□□□□ 0.43
ACTA1-202ENST00000366684 TM4SF4P48230 202 aa17.74■□□□□ 0.43
ACTA1-202ENST00000366684 DHX36Q9H2U1 1008 aaKnown RBP17.74■□□□□ 0.43
ACTA1-202ENST00000366684 SAGE1Q9NXZ1 904 aa17.74■□□□□ 0.43
ACTA1-202ENST00000366684 SIPA1L1O43166 1804 aa17.73■□□□□ 0.43
ACTA1-202ENST00000366684 MANSC4A6NHS7 340 aaPredicted RBP17.73■□□□□ 0.43
ACTA1-202ENST00000366684 PHF20L1A8MW92 1017 aa17.73■□□□□ 0.43
ACTA1-202ENST00000366684 TBC1D12O60347 775 aa17.73■□□□□ 0.43
ACTA1-202ENST00000366684 CHMLP26374 656 aa17.73■□□□□ 0.43
ACTA1-202ENST00000366684 NOL9Q5SY16 702 aaKnown RBP17.73■□□□□ 0.43
ACTA1-202ENST00000366684 ERO1BQ86YB8 467 aa17.73■□□□□ 0.43
ACTA1-202ENST00000366684 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
ACTA1-202ENST00000366684 RNF186Q9NXI6 227 aa17.73■□□□□ 0.43
ACTA1-202ENST00000366684 MYH1P12882 1939 aa17.73■□□□□ 0.43
ACTA1-202ENST00000366684 SLURP2P0DP57 97 aa17.72■□□□□ 0.43
ACTA1-202ENST00000366684 LBX1P52954 281 aa17.72■□□□□ 0.43
ACTA1-202ENST00000366684 UBE3CQ15386 1083 aa17.72■□□□□ 0.43
ACTA1-202ENST00000366684 TICAM2Q86XR7 235 aa17.72■□□□□ 0.43
ACTA1-202ENST00000366684 KBTBD3Q8NAB2 608 aa17.72■□□□□ 0.43
ACTA1-202ENST00000366684 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
ACTA1-202ENST00000366684 OTUD5Q96G74 571 aa17.72■□□□□ 0.43
ACTA1-202ENST00000366684 TSKSQ9UJT2 592 aa17.72■□□□□ 0.43
ACTA1-202ENST00000366684 TRPA1O75762 1119 aa17.71■□□□□ 0.43
ACTA1-202ENST00000366684 USP5P45974 858 aa17.71■□□□□ 0.43
ACTA1-202ENST00000366684 RBM25P49756 843 aaKnown RBP17.71■□□□□ 0.43
ACTA1-202ENST00000366684 INHBEP58166 350 aa17.71■□□□□ 0.43
ACTA1-202ENST00000366684 SLFNL1Q499Z3 407 aa17.71■□□□□ 0.43
ACTA1-202ENST00000366684 ZSCAN25Q6NSZ9 544 aa17.71■□□□□ 0.43
ACTA1-202ENST00000366684 ESYT1Q9BSJ8 1104 aa17.71■□□□□ 0.43
ACTA1-202ENST00000366684 PRDM10Q9NQV6 1147 aa17.71■□□□□ 0.43
ACTA1-202ENST00000366684 DIAPH3Q9NSV4 1193 aa17.71■□□□□ 0.43
ACTA1-202ENST00000366684 PI4KBQ9UBF8 816 aa17.71■□□□□ 0.43
ACTA1-202ENST00000366684 DOCK1Q14185 1865 aa17.7■□□□□ 0.42
ACTA1-202ENST00000366684 DDX60LQ5H9U9 1706 aaKnown RBP17.7■□□□□ 0.42
ACTA1-202ENST00000366684 EPB41L2O43491 1005 aaKnown RBP17.7■□□□□ 0.42
ACTA1-202ENST00000366684 PPIL2Q13356 520 aa17.7■□□□□ 0.42
ACTA1-202ENST00000366684 CRNKL1Q9BZJ0 848 aaKnown RBP17.7■□□□□ 0.42
ACTA1-202ENST00000366684 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.7■□□□□ 0.42
ACTA1-202ENST00000366684 DAXXQ9UER7 740 aaPredicted RBP17.7■□□□□ 0.42
ACTA1-202ENST00000366684 SAP30BPQ9UHR5 308 aaKnown RBP17.7■□□□□ 0.42
ACTA1-202ENST00000366684 HERC5Q9UII4 1024 aaKnown RBP17.7■□□□□ 0.42
ACTA1-202ENST00000366684 PALD1Q9ULE6 856 aa17.7■□□□□ 0.42
ACTA1-202ENST00000366684 NAV1Q8NEY1 1877 aa17.7■□□□□ 0.42
ACTA1-202ENST00000366684 FAM196BA6NMK8 535 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 CHGBP05060 677 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 GTF2A2P52657 109 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 PPATQ06203 517 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 SCYL3Q8IZE3 742 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 LCORLQ8N3X6 602 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 MS4A4AQ96JQ5 239 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 TESPA1A2RU30 521 aaPredicted RBP17.69■□□□□ 0.42
ACTA1-202ENST00000366684 IRF6O14896 467 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 CTNND1O60716 968 aaKnown RBP17.69■□□□□ 0.42
ACTA1-202ENST00000366684 MBD4O95243 580 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 MCCP23508 829 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 BECN1Q14457 450 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 COL13A1Q5TAT6 717 aaPredicted RBP17.69■□□□□ 0.42
ACTA1-202ENST00000366684 METTL16Q86W50 562 aaKnown RBP17.69■□□□□ 0.42
ACTA1-202ENST00000366684 IFNL1Q8IU54 200 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 ARMT1Q9H993 441 aa17.69■□□□□ 0.42
ACTA1-202ENST00000366684 IGF2BP3O00425 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
ACTA1-202ENST00000366684 HLA-DOAP06340 250 aa17.68■□□□□ 0.42
ACTA1-202ENST00000366684 FOXP4Q8IVH2 680 aaPredicted RBP17.68■□□□□ 0.42
ACTA1-202ENST00000366684 FSD1Q9BTV5 496 aa17.68■□□□□ 0.42
ACTA1-202ENST00000366684 PICK1Q9NRD5 415 aa17.68■□□□□ 0.42
ACTA1-202ENST00000366684 RAD50Q92878 1312 aa17.68■□□□□ 0.42
ACTA1-202ENST00000366684 ATAD5Q96QE3 1844 aa17.67■□□□□ 0.42
ACTA1-202ENST00000366684 RNF113AO15541 343 aaKnown RBP17.67■□□□□ 0.42
ACTA1-202ENST00000366684 ALDH1A1P00352 501 aa17.67■□□□□ 0.42
ACTA1-202ENST00000366684 ZFYP08048 801 aaPredicted RBP17.67■□□□□ 0.42
ACTA1-202ENST00000366684 LRRFIP1Q32MZ4 808 aaKnown RBP17.67■□□□□ 0.42
ACTA1-202ENST00000366684 CRACR2BQ8N4Y2 399 aaPredicted RBP17.67■□□□□ 0.42
ACTA1-202ENST00000366684 BRI3BPQ8WY22 251 aa17.67■□□□□ 0.42
ACTA1-202ENST00000366684 PTPN18Q99952 460 aa17.67■□□□□ 0.42
ACTA1-202ENST00000366684 DNAJC18Q9H819 358 aa17.67■□□□□ 0.42
ACTA1-202ENST00000366684 CASP8AP2Q9UKL3 1982 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 CCL15-CCL14A0A0B4J2E2 113 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 CETPP11597 493 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 PTPRAP18433 802 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 SNAPC2Q13487 334 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 CCL15Q16663 113 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 SLC4A8Q2Y0W8 1093 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 OTUD7BQ6GQQ9 843 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 SDR42E1Q8WUS8 393 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 CFHR5Q9BXR6 569 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 PUS7LQ9H0K6 701 aaKnown RBP17.66■□□□□ 0.42
ACTA1-202ENST00000366684 EHD4Q9H223 541 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 DCP1AQ9NPI6 582 aaPredicted RBP17.66■□□□□ 0.42
ACTA1-202ENST00000366684 KCNH4Q9UQ05 1017 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 PHIPQ8WWQ0 1821 aa17.66■□□□□ 0.42
ACTA1-202ENST00000366684 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
ACTA1-202ENST00000366684 TTC6Q86TZ1 520 aa17.65■□□□□ 0.42
ACTA1-202ENST00000366684 APPBP2Q92624 585 aa17.65■□□□□ 0.42
ACTA1-202ENST00000366684 USP26Q9BXU7 913 aa17.65■□□□□ 0.42
ACTA1-202ENST00000366684 TRIM34Q9BYJ4 488 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms