RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 MDFIQ99750 246 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 LIN7BQ9HAP6 207 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 FAM8A1Q9UBU6 413 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 QRICH2Q9H0J4 1663 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 TNS3Q68CZ2 1445 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 ALS2Q96Q42 1657 aa10.9□□□□□ -0.66
YBX3-204ENST00000366290 ADARB2-AS1A8MUL3 147 aa10.9□□□□□ -0.66
YBX3-204ENST00000366290 CTSHP09668 335 aa10.9□□□□□ -0.66
YBX3-204ENST00000366290 EIF2AK2P19525 551 aaKnown RBP10.9□□□□□ -0.66
YBX3-204ENST00000366290 FAM35AQ86V20 835 aa10.9□□□□□ -0.66
YBX3-204ENST00000366290 GALNT6Q8NCL4 622 aa10.9□□□□□ -0.66
YBX3-204ENST00000366290 TRPC5Q9UL62 973 aaPredicted RBP10.9□□□□□ -0.66
YBX3-204ENST00000366290 POLR3AO14802 1390 aaPredicted RBP10.9□□□□□ -0.67
YBX3-204ENST00000366290 ROCK2O75116 1388 aaKnown RBP10.9□□□□□ -0.67
YBX3-204ENST00000366290 CNTNAP5Q8WYK1 1306 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 RALGAPBQ86X10 1494 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 USP17L7P0C7H9 530 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 CPB1P15086 417 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 TCF3P15923 654 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 ATP11AP98196 1134 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 PRPF40BQ6NWY9 871 aaKnown RBP10.89□□□□□ -0.67
YBX3-204ENST00000366290 TMEM87AQ8NBN3 555 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 EDARADDQ8WWZ3 215 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 TCF12Q99081 682 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 CDK19Q9BWU1 502 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 RBSNQ9H1K0 784 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 RASSF4Q9H2L5 321 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 NAGPAQ9UK23 515 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 ARHGEF10O15013 1369 aa10.89□□□□□ -0.67
YBX3-204ENST00000366290 NFKBIEO00221 500 aa10.88□□□□□ -0.67
YBX3-204ENST00000366290 CCNJLQ8IV13 435 aa10.88□□□□□ -0.67
YBX3-204ENST00000366290 ABCA3Q99758 1704 aa10.88□□□□□ -0.67
YBX3-204ENST00000366290 PBX4Q9BYU1 374 aa10.88□□□□□ -0.67
YBX3-204ENST00000366290 PPP4R2Q9NY27 417 aa10.88□□□□□ -0.67
YBX3-204ENST00000366290 SBNO2Q9Y2G9 1366 aa10.88□□□□□ -0.67
YBX3-204ENST00000366290 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
YBX3-204ENST00000366290 ELOA3DA6NLF2 546 aaPredicted RBP10.87□□□□□ -0.67
YBX3-204ENST00000366290 SCAMP3O14828 347 aaKnown RBP10.87□□□□□ -0.67
YBX3-204ENST00000366290 GDF11O95390 407 aa10.87□□□□□ -0.67
YBX3-204ENST00000366290 HOXB4P17483 251 aaPredicted RBP10.87□□□□□ -0.67
YBX3-204ENST00000366290 SNRPNP63162 240 aaKnown RBP10.87□□□□□ -0.67
YBX3-204ENST00000366290 ELOA3BQ3SY89 546 aa10.87□□□□□ -0.67
YBX3-204ENST00000366290 ELOA3Q8NG57 546 aa10.87□□□□□ -0.67
YBX3-204ENST00000366290 PMFBP1Q8TBY8 1022 aa10.87□□□□□ -0.67
YBX3-204ENST00000366290 ABCB6Q9NP58 842 aa10.87□□□□□ -0.67
YBX3-204ENST00000366290 CRYBG1Q9Y4K1 1723 aa10.87□□□□□ -0.67
YBX3-204ENST00000366290 EPXP11678 715 aa10.86□□□□□ -0.67
YBX3-204ENST00000366290 GSTT1P30711 240 aa10.86□□□□□ -0.67
YBX3-204ENST00000366290 FCGRTP55899 365 aa10.86□□□□□ -0.67
YBX3-204ENST00000366290 PERM1Q5SV97 790 aa10.86□□□□□ -0.67
YBX3-204ENST00000366290 TMEM151AQ8N4L1 468 aa10.86□□□□□ -0.67
YBX3-204ENST00000366290 TMEM102Q8N9M5 508 aaPredicted RBP10.86□□□□□ -0.67
YBX3-204ENST00000366290 PLD4Q96BZ4 506 aa10.86□□□□□ -0.67
YBX3-204ENST00000366290 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.86□□□□□ -0.67
YBX3-204ENST00000366290 SLIT2O94813 1529 aa10.85□□□□□ -0.67
YBX3-204ENST00000366290 TMEM238LA0A1B0GVL6 79 aa10.85□□□□□ -0.67
YBX3-204ENST00000366290 PDE2AO00408 941 aaPredicted RBP10.85□□□□□ -0.67
YBX3-204ENST00000366290 KANK3Q6NY19 840 aa10.85□□□□□ -0.67
YBX3-204ENST00000366290 NXPE3Q969Y0 559 aa10.85□□□□□ -0.67
YBX3-204ENST00000366290 BHLHE41Q9C0J9 482 aaPredicted RBP10.85□□□□□ -0.67
YBX3-204ENST00000366290 GLI3P10071 1580 aa10.85□□□□□ -0.67
YBX3-204ENST00000366290 METTL12A8MUP2 240 aa10.84□□□□□ -0.67
YBX3-204ENST00000366290 SMNDC1O75940 238 aaKnown RBP eCLIP10.84□□□□□ -0.67
YBX3-204ENST00000366290 GRIA4P48058 902 aa10.84□□□□□ -0.67
YBX3-204ENST00000366290 MEI1Q5TIA1 1274 aa10.84□□□□□ -0.67
YBX3-204ENST00000366290 ELMSAN1Q6PJG2 1045 aa10.84□□□□□ -0.67
YBX3-204ENST00000366290 MICALL1Q8N3F8 863 aa10.84□□□□□ -0.67
YBX3-204ENST00000366290 C3orf58Q8NDZ4 430 aa10.84□□□□□ -0.67
YBX3-204ENST00000366290 NGDNQ8NEJ9 315 aaKnown RBP10.84□□□□□ -0.67
YBX3-204ENST00000366290 LPIN3Q9BQK8 851 aa10.84□□□□□ -0.67
YBX3-204ENST00000366290 SMG9Q9H0W8 520 aaKnown RBP10.84□□□□□ -0.67
YBX3-204ENST00000366290 BRD4O60885 1362 aaPredicted RBP10.84□□□□□ -0.67
YBX3-204ENST00000366290 NWD2Q9ULI1 1742 aa10.84□□□□□ -0.67
YBX3-204ENST00000366290 ACEP12821 1306 aa10.84□□□□□ -0.67
YBX3-204ENST00000366290 EVC2Q86UK5 1308 aa10.84□□□□□ -0.67
YBX3-204ENST00000366290 ALAS2P22557 587 aa10.83□□□□□ -0.68
YBX3-204ENST00000366290 CEP135Q66GS9 1140 aa10.83□□□□□ -0.68
YBX3-204ENST00000366290 PSAPL1Q6NUJ1 521 aa10.83□□□□□ -0.68
YBX3-204ENST00000366290 POP1Q99575 1024 aaKnown RBP10.83□□□□□ -0.68
YBX3-204ENST00000366290 FRRS1LQ9P0K9 344 aa10.83□□□□□ -0.68
YBX3-204ENST00000366290 PPIP5K1Q6PFW1 1433 aa10.83□□□□□ -0.68
YBX3-204ENST00000366290 USP31Q70CQ4 1352 aa10.82□□□□□ -0.68
YBX3-204ENST00000366290 XRCC5P13010 732 aaKnown RBP10.82□□□□□ -0.68
YBX3-204ENST00000366290 SPRED3Q2MJR0 410 aa10.82□□□□□ -0.68
YBX3-204ENST00000366290 DTHD1Q6ZMT9 781 aa10.82□□□□□ -0.68
YBX3-204ENST00000366290 UNC5CLQ8IV45 518 aa10.82□□□□□ -0.68
YBX3-204ENST00000366290 BEND7Q8N7W2 519 aaPredicted RBP10.82□□□□□ -0.68
YBX3-204ENST00000366290 ASAP3Q8TDY4 903 aa10.82□□□□□ -0.68
YBX3-204ENST00000366290 CARD11Q9BXL7 1154 aa10.82□□□□□ -0.68
YBX3-204ENST00000366290 METTL5Q9NRN9 209 aaKnown RBP10.82□□□□□ -0.68
YBX3-204ENST00000366290 BRWD3Q6RI45 1802 aa10.81□□□□□ -0.68
YBX3-204ENST00000366290 HDLBPQ00341 1268 aaKnown RBP10.81□□□□□ -0.68
YBX3-204ENST00000366290 FANCCQ00597 558 aa10.81□□□□□ -0.68
YBX3-204ENST00000366290 TAF1CQ15572 869 aaPredicted RBP10.81□□□□□ -0.68
YBX3-204ENST00000366290 PODNQ7Z5L7 613 aa10.81□□□□□ -0.68
YBX3-204ENST00000366290 STARD13Q9Y3M8 1113 aa10.81□□□□□ -0.68
YBX3-204ENST00000366290 SSH2Q76I76 1423 aa10.81□□□□□ -0.68
YBX3-204ENST00000366290 PLCH1Q4KWH8 1693 aa10.8□□□□□ -0.68
YBX3-204ENST00000366290 A0A096LPE4 126 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms