RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 GSC2O15499 205 aa3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 CILPO75339 1184 aa3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 VAMP1P23763 118 aa3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 SSTR4P31391 388 aa3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 CRKP46108 304 aa3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 LRP8Q14114 963 aa3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 MAP7Q14244 749 aa3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 FBXL19Q6PCT2 694 aa3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 METTL16Q86W50 562 aaKnown RBP3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 HEXIM2Q96MH2 286 aaKnown RBP3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 WNT10AQ9GZT5 417 aa3.36□□□□□ -1.87
RNU6-271P-201ENST00000363858 MINDY4BA8MYZ0 360 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 FANCGO15287 622 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 GREM1O60565 184 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 RNGTTO60942 597 aaKnown RBP3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 SLITRK5O94991 958 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 EOMESO95936 686 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 FAM87AP0C7U9 286 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 GRK4P32298 578 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 GBP2P32456 591 aaPredicted RBP3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 RACK1P63244 317 aaKnown RBP3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 RPL6Q02878 288 aaKnown RBP3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 ZNF394Q53GI3 561 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 OGFOD3Q6PK18 319 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 ARMCX6Q7L4S7 300 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 CCDC84Q86UT8 332 aaPredicted RBP3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 SLC51AQ86UW1 340 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 DTX1Q86Y01 620 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 TOP6BLQ8N6T0 577 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 FAM181AQ8N9Y4 354 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 JARID2Q92833 1246 aaPredicted RBP3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 ELMO3Q96BJ8 720 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 ACSF2Q96CM8 615 aaPredicted RBP3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 DUSP23Q9BVJ7 150 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 MIR1-1HGQ9H1L0 117 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 PIDD1Q9HB75 910 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 PIM2Q9P1W9 311 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 TJP2Q9UDY2 1190 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 PCOLCE2Q9UKZ9 415 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 SNCAIPQ9Y6H5 919 aa3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 COL17A1Q9UMD9 1497 aaPredicted RBP3.35□□□□□ -1.87
RNU6-271P-201ENST00000363858 FOSL1P15407 271 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 CAP2P40123 477 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 HDLBPQ00341 1268 aaKnown RBP3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 TSNAXIP1Q2TAA8 658 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 PRAMEF13Q5VWM6 474 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 FAM196AQ6ZSG2 479 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 HDXQ7Z353 690 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 GOLM1Q8NBJ4 401 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 TMEM87AQ8NBN3 555 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 RIN3Q8TB24 985 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 PPP1R13LQ8WUF5 828 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 GATAD2BQ8WXI9 593 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 MRRFQ96E11 262 aaKnown RBP3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 DPH2Q9BQC3 489 aaPredicted RBP3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 YIPF2Q9BWQ6 316 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 LRRC3Q9BY71 257 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 ZC3H7BQ9UGR2 993 aaKnown RBP3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 PLAGL2Q9UPG8 496 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 PCDHGB7Q9Y5F8 929 aa3.34□□□□□ -1.87
RNU6-271P-201ENST00000363858 TLR3O15455 904 aaKnown RBP3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 GRIN3BO60391 1043 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 COBLO75128 1261 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 CST3P01034 146 aaPredicted RBP3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 RLBP1P12271 317 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 EIF4A3P38919 411 aaKnown RBP3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 OXCT1P55809 520 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 RAD51AP2Q09MP3 1159 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 REC114Q7Z4M0 266 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 PLD6Q8N2A8 252 aaKnown RBP3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 DNAJB8Q8NHS0 232 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 ZNF507Q8TCN5 953 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 ZNF296Q8WUU4 475 aaPredicted RBP3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 EAF1Q96JC9 268 aaPredicted RBP3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 OSBPL1AQ9BXW6 950 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 ZFP64Q9NPA5 681 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 PRDM10Q9NQV6 1147 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 UBP1Q9NZI7 540 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 GGT7Q9UJ14 662 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 TACC3Q9Y6A5 838 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 PRR36Q9H6K5 1346 aa3.33□□□□□ -1.88
RNU6-271P-201ENST00000363858 SCO2A0A1W2PP80 73 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 PRR33A8MZF0 331 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 UPK3BL1B0FP48 263 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 UPK3BL2E5RIL1 263 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 LRIG2O94898 1065 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 PRNPP04156 253 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 ZNF76P36508 570 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 ETF1P62495 437 aaKnown RBP3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 CPSF6Q16630 551 aaKnown RBP eCLIP3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 TMEM201Q5SNT2 666 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 SNAP47Q5SQN1 464 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 C9orf131Q5VYM1 1079 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 ZNF574Q6ZN55 896 aaPredicted RBP3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 HS2ST1Q7LGA3 356 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 RELL1Q8IUW5 271 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 MRPL41Q8IXM3 137 aaKnown RBP3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 TMEM87BQ96K49 555 aa3.32□□□□□ -1.88
RNU6-271P-201ENST00000363858 FOXQ1Q9C009 403 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms