RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TRERF1Q96PN7 1200 aa12.2□□□□□ -0.46
SMC3-201ENST00000361804 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 MTF1Q14872 753 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 TRIM65Q6PJ69 517 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 CHMP4CQ96CF2 233 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 WDR24Q96S15 920 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 MAP3K14Q99558 947 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.19□□□□□ -0.462e-8■■■□□ 14.6
SMC3-201ENST00000361804 DDX60LQ5H9U9 1706 aaKnown RBP12.19□□□□□ -0.46
SMC3-201ENST00000361804 SH2B2O14492 632 aaPredicted RBP12.19□□□□□ -0.46
SMC3-201ENST00000361804 KCNQ2O43526 872 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 TRDNQ13061 729 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 TERF2Q15554 542 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 BRAPQ7Z569 592 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 DHX16O60231 1041 aaKnown RBP12.19□□□□□ -0.46
SMC3-201ENST00000361804 EIF5P55010 431 aaKnown RBP12.19□□□□□ -0.46
SMC3-201ENST00000361804 KARSQ15046 597 aaKnown RBP12.19□□□□□ -0.46
SMC3-201ENST00000361804 TOGARAM2Q6ZUX3 1019 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 CNNM3Q8NE01 707 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 ARMT1Q9H993 441 aa12.19□□□□□ -0.46
SMC3-201ENST00000361804 GOLGA8AA7E2F4 631 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 POLR3GO15318 223 aaPredicted RBP12.18□□□□□ -0.46
SMC3-201ENST00000361804 ADD2P35612 726 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 CCDC93Q567U6 631 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 CCDC150Q8NCX0 1101 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 OXER1Q8TDS5 423 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 ZNF384Q8TF68 577 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 EPB41L4AQ9HCS5 686 aaPredicted RBP12.18□□□□□ -0.46
SMC3-201ENST00000361804 ZMYM6O95789 1325 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 TMEM67Q5HYA8 995 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
SMC3-201ENST00000361804 ZSWIM5Q9P217 1185 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 IMPACTQ9P2X3 320 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 MYL5Q02045 173 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 NTRK3Q16288 839 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 REXO1L1PQ8IX06 675 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 MED15Q96RN5 788 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 L2HGDHQ9H9P8 463 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 KCNH3Q9ULD8 1083 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 HPSEQ9Y251 543 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 FHOD1Q9Y613 1164 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 MYH2Q9UKX2 1941 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 A0A0G2JS52 829 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 ZBTB43O43298 467 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 IARSP41252 1262 aaKnown RBP12.18□□□□□ -0.46
SMC3-201ENST00000361804 TOB1P50616 345 aaPredicted RBP12.18□□□□□ -0.46
SMC3-201ENST00000361804 MIGA1Q8NAN2 632 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMC3-201ENST00000361804 LY9Q9HBG7 655 aa12.18□□□□□ -0.46
SMC3-201ENST00000361804 SAMSN1Q9NSI8 373 aaKnown RBP12.18□□□□□ -0.46
SMC3-201ENST00000361804 POLR2DO15514 142 aaKnown RBP12.17□□□□□ -0.46
SMC3-201ENST00000361804 TOP1P11387 765 aaKnown RBP12.17□□□□□ -0.46
SMC3-201ENST00000361804 PDE6AP16499 860 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 STX17P56962 302 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 ETF1P62495 437 aaKnown RBP12.17□□□□□ -0.46
SMC3-201ENST00000361804 SMYD4Q8IYR2 804 aaPredicted RBP12.17□□□□□ -0.46
SMC3-201ENST00000361804 IGDCC4Q8TDY8 1250 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 CPLX3Q8WVH0 158 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 STAMQ92783 540 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 TBC1D2BQ9UPU7 963 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 PCDHB6Q9Y5E3 794 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 KLHL10Q6JEL2 608 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 SERTAD1Q9UHV2 236 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 TUBE1Q9UJT0 475 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 VWA3AA6NCI4 1184 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 IFIT3O14879 490 aaKnown RBP12.17□□□□□ -0.46
SMC3-201ENST00000361804 CAMTA2O94983 1202 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 KIF20AO95235 890 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 NOM1Q5C9Z4 860 aaKnown RBP12.17□□□□□ -0.46
SMC3-201ENST00000361804 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 BPIFA3Q9BQP9 254 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 AKAP2Q9Y2D5 859 aa12.17□□□□□ -0.46
SMC3-201ENST00000361804 BAZ2BQ9UIF8 2168 aaKnown RBP12.17□□□□□ -0.46
SMC3-201ENST00000361804 MBD4O95243 580 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 H2AFXP16104 143 aaPredicted RBP12.16□□□□□ -0.46
SMC3-201ENST00000361804 GYS2P54840 703 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 TPM4P67936 248 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 RESP18Q5W5W9 173 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 KRBA2Q6ZNG9 492 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 TMEM139Q8IV31 216 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 MAGEB6Q8N7X4 407 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMC3-201ENST00000361804 NUP133Q8WUM0 1156 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 SHISA4Q96DD7 197 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 SPATA31A5Q5VU36 1347 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 SPATA31A7Q8IWB4 1347 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 WNT7AO00755 349 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 SUSD4Q5VX71 490 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 VSTM4Q8IW00 320 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 IRS2Q9Y4H2 1338 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 ZFYP08048 801 aaPredicted RBP12.16□□□□□ -0.46
SMC3-201ENST00000361804 PLA2G4AP47712 749 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 FBXL16Q8N461 479 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 AIDAQ96BJ3 306 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 NFE2L3Q9Y4A8 694 aa12.16□□□□□ -0.46
SMC3-201ENST00000361804 PNMA6AP0CW24 399 aaPredicted RBP12.15□□□□□ -0.46
SMC3-201ENST00000361804 MAN1B1Q9UKM7 699 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms