RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 PAPPA2Q9BXP8 1791 aa16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 EPB41L2O43491 1005 aaKnown RBP16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 USP2O75604 605 aaPredicted RBP16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 FGAP02671 866 aa16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 PLCD1P51178 756 aa16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 GABPAQ06546 454 aa16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 DDX60LQ5H9U9 1706 aaKnown RBP16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 VPS53Q5VIR6 699 aa16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 CRACR2BQ8N4Y2 399 aaPredicted RBP16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 KLRG1Q96E93 195 aa16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 TRIM34Q9BYJ4 488 aa16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 ZNF408Q9H9D4 720 aa16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 GINM1Q9NU53 330 aa16.49■□□□□ 0.23
NSMCE1-201ENST00000361439 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 NT5C2P49902 561 aa16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 FMR1Q06787 632 aaKnown RBP eCLIP16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 TTLL12Q14166 644 aaPredicted RBP16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 LDLRAD1Q5T700 205 aa16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 SAPCD2Q86UD0 394 aa16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 IL25Q9H293 177 aa16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 ANAPC4Q9UJX5 808 aa16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 TLL2Q9Y6L7 1015 aa16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 ROBO3Q96MS0 1386 aa16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 NAV1Q8NEY1 1877 aa16.48■□□□□ 0.23
NSMCE1-201ENST00000361439 MYH1P12882 1939 aa16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 PHF20L1A8MW92 1017 aa16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 CTNND1O60716 968 aaKnown RBP16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 PCP11498 1178 aaKnown RBP16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 MAP3K9P80192 1104 aa16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 TATDN1Q6P1N9 297 aa16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 C16orf86Q6ZW13 317 aa16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 MIGA2Q7L4E1 593 aa16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 ANKRD13AQ8IZ07 590 aa16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 MAP4K1Q92918 833 aa16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 ANGEL1Q9UNK9 670 aaKnown RBP16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
NSMCE1-201ENST00000361439 REC8O95072 547 aa16.46■□□□□ 0.23
NSMCE1-201ENST00000361439 HSPA6P17066 643 aa16.46■□□□□ 0.23
NSMCE1-201ENST00000361439 PPARAQ07869 468 aa16.46■□□□□ 0.23
NSMCE1-201ENST00000361439 WRNIP1Q96S55 665 aa16.46■□□□□ 0.23
NSMCE1-201ENST00000361439 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
NSMCE1-201ENST00000361439 HUNKP57058 714 aa16.45■□□□□ 0.22
NSMCE1-201ENST00000361439 PDE4BQ07343 736 aa16.45■□□□□ 0.22
NSMCE1-201ENST00000361439 IMMTQ16891 758 aaKnown RBP16.45■□□□□ 0.22
NSMCE1-201ENST00000361439 NOL9Q5SY16 702 aaKnown RBP16.45■□□□□ 0.22
NSMCE1-201ENST00000361439 CCDC17Q96LX7 622 aa16.45■□□□□ 0.22
NSMCE1-201ENST00000361439 LSG1Q9H089 658 aaKnown RBP16.45■□□□□ 0.22
NSMCE1-201ENST00000361439 DNAJC18Q9H819 358 aa16.45■□□□□ 0.22
NSMCE1-201ENST00000361439 CSADQ9Y600 493 aa16.45■□□□□ 0.22
NSMCE1-201ENST00000361439 RASSF10A6NK89 507 aa16.44■□□□□ 0.22
NSMCE1-201ENST00000361439 FGRP09769 529 aa16.44■□□□□ 0.22
NSMCE1-201ENST00000361439 CYP2D6P10635 497 aa16.44■□□□□ 0.22
NSMCE1-201ENST00000361439 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.44■□□□□ 0.22
NSMCE1-201ENST00000361439 TBC1D2Q9BYX2 928 aa16.44■□□□□ 0.22
NSMCE1-201ENST00000361439 RNF41Q9H4P4 317 aaPredicted RBP16.44■□□□□ 0.22
NSMCE1-201ENST00000361439 ANO2Q9NQ90 1003 aa16.44■□□□□ 0.22
NSMCE1-201ENST00000361439 UBE2Q2LH0YL09 131 aa16.43■□□□□ 0.22
NSMCE1-201ENST00000361439 ZNF213O14771 459 aa16.43■□□□□ 0.22
NSMCE1-201ENST00000361439 SHMT1P34896 483 aa16.43■□□□□ 0.22
NSMCE1-201ENST00000361439 CAP2P40123 477 aa16.43■□□□□ 0.22
NSMCE1-201ENST00000361439 CDK8P49336 464 aa16.43■□□□□ 0.22
NSMCE1-201ENST00000361439 PTH1RQ03431 593 aa16.43■□□□□ 0.22
NSMCE1-201ENST00000361439 PRKG1Q13976 671 aa16.43■□□□□ 0.22
NSMCE1-201ENST00000361439 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
NSMCE1-201ENST00000361439 ABT1Q9ULW3 272 aaKnown RBP16.43■□□□□ 0.22
NSMCE1-201ENST00000361439 BAZ2AQ9UIF9 1905 aaKnown RBP16.43■□□□□ 0.22
NSMCE1-201ENST00000361439 CYP2D7A0A087X1C5 515 aa16.42■□□□□ 0.22
NSMCE1-201ENST00000361439 ASNSP08243 561 aa16.42■□□□□ 0.22
NSMCE1-201ENST00000361439 VGLL4Q14135 290 aa16.42■□□□□ 0.22
NSMCE1-201ENST00000361439 SLC4A8Q2Y0W8 1093 aa16.42■□□□□ 0.22
NSMCE1-201ENST00000361439 RGMBQ6NW40 437 aa16.42■□□□□ 0.22
NSMCE1-201ENST00000361439 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
NSMCE1-201ENST00000361439 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
NSMCE1-201ENST00000361439 SLC10A4Q96EP9 437 aa16.42■□□□□ 0.22
NSMCE1-201ENST00000361439 SIPA1L1O43166 1804 aa16.42■□□□□ 0.22
NSMCE1-201ENST00000361439 ORC4O43929 436 aa16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 INPP5BP32019 993 aa16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 RNF20Q5VTR2 975 aa16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 MOB2Q70IA6 237 aa16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 ERO1BQ86YB8 467 aa16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 STAG1Q8WVM7 1258 aa16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 DYNLL2Q96FJ2 89 aa16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 MKNK2Q9HBH9 465 aa16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 CABP5Q9NP86 173 aa16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 PICK1Q9NRD5 415 aa16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 RBM8AQ9Y5S9 174 aaKnown RBP16.41■□□□□ 0.22
NSMCE1-201ENST00000361439 FAM196BA6NMK8 535 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 ZBTB48P10074 688 aaPredicted RBP16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 PPATQ06203 517 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 NECTIN1Q15223 517 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 ABCB5Q2M3G0 1257 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 DEFB115Q30KQ5 88 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 PPP4R3BQ5MIZ7 849 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 AKNAD1Q5T1N1 836 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 MFSD6Q6ZSS7 791 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 ZNF444Q8N0Y2 327 aaPredicted RBP16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms