RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 DOCK2Q92608 1830 aa9.08□□□□□ -0.96
CCL28-201ENST00000361115 SPDYE2BA6NHP3 402 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 TBC1D8O95759 1140 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 SPDYE6P0CI01 402 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 MAP3K9P80192 1104 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 SLC9C1Q4G0N8 1177 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 ERO1BQ86YB8 467 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 CSADQ9Y600 493 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 PDS5AQ29RF7 1337 aaKnown RBP9.07□□□□□ -0.96
CCL28-201ENST00000361115 TMEM265A0A087WTH1 108 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 GJB1P08034 283 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 SNAPC2Q13487 334 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 UBE4AQ14139 1066 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 GIMAP6Q6P9H5 292 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 FUCA2Q9BTY2 467 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 SRCIN1Q9C0H9 1055 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 CHPF2Q9P2E5 772 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 UBE2Q2LH0YL09 131 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 RAD21O60216 631 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 GJA8P48165 433 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 PIP4K2AP48426 406 aaPredicted RBP9.07□□□□□ -0.96
CCL28-201ENST00000361115 DCTN1Q14203 1278 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 CERS3Q8IU89 383 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 HS6ST3Q8IZP7 471 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 CCDC82Q8N4S0 544 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 ANGEL1Q9UNK9 670 aaKnown RBP9.07□□□□□ -0.96
CCL28-201ENST00000361115 KCNH4Q9UQ05 1017 aa9.07□□□□□ -0.96
CCL28-201ENST00000361115 RIMBP2O15034 1052 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 SEMA3EO15041 775 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 TLR2O60603 784 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 PTGS1P23219 599 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 TERF2Q15554 542 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 DEFB129Q9H1M3 183 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 PRDM16Q9HAZ2 1276 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 MORC2Q9Y6X9 1032 aaPredicted RBP9.06□□□□□ -0.96
CCL28-201ENST00000361115 CXCL11O14625 94 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 CLGNO14967 610 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 DOK7Q18PE1 504 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 TTLL11Q8NHH1 800 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 INTS4Q96HW7 963 aaKnown RBP9.06□□□□□ -0.96
CCL28-201ENST00000361115 TMOD2Q9NZR1 351 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 MTMR7Q9Y216 660 aa9.06□□□□□ -0.96
CCL28-201ENST00000361115 TTLL5Q6EMB2 1281 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 ANKRD44Q8N8A2 993 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 TMEM87AQ8NBN3 555 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 KIF18AQ8NI77 898 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 C16orf45Q96MC5 204 aaPredicted RBP9.05□□□□□ -0.96
CCL28-201ENST00000361115 PARK7Q99497 189 aaKnown RBP9.05□□□□□ -0.96
CCL28-201ENST00000361115 ARIH1Q9Y4X5 557 aaPredicted RBP9.05□□□□□ -0.96
CCL28-201ENST00000361115 DOCK1Q14185 1865 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 ANKRD18BA2A2Z9 1011 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 EIF2S2P20042 333 aaKnown RBP9.05□□□□□ -0.96
CCL28-201ENST00000361115 LRMPQ12912 555 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCL28-201ENST00000361115 STK31Q9BXU1 1019 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 UPF3BQ9BZI7 483 aaKnown RBP9.05□□□□□ -0.96
CCL28-201ENST00000361115 CD209Q9NNX6 404 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 HDAC5Q9UQL6 1122 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 MROH5Q6ZUA9 1318 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 MCM2P49736 904 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 SYCP1Q15431 976 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 KRT24Q2M2I5 525 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 PROSER3Q2NL68 480 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 LRIT3Q3SXY7 679 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 C8orf58Q8NAV2 365 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 MS4A4AQ96JQ5 239 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 ZNF341Q9BYN7 854 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 ZNF112Q9UJU3 913 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 STXBP5LQ9Y2K9 1186 aa9.05□□□□□ -0.96
CCL28-201ENST00000361115 ZNF236Q9UL36 1845 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 SMTNL1A8MU46 457 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 USP2O75604 605 aaPredicted RBP9.04□□□□□ -0.96
CCL28-201ENST00000361115 FCGRTP55899 365 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 CRHR2Q13324 411 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 OS9Q13438 667 aaPredicted RBP9.04□□□□□ -0.96
CCL28-201ENST00000361115 TSHZ3Q63HK5 1081 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 CEP85Q6P2H3 762 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 FASTKD5Q7L8L6 764 aaKnown RBP9.04□□□□□ -0.96
CCL28-201ENST00000361115 FAM89AQ96GI7 184 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 SRRDQ9UH36 339 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 ERICH4A6NGS2 130 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 ALDH1L1O75891 902 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 LACTBP83111 547 aaPredicted RBP9.04□□□□□ -0.96
CCL28-201ENST00000361115 HHIPL2Q6UWX4 724 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 LINS1Q8NG48 757 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 MPHOSPH8Q99549 860 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 MYH13Q9UKX3 1938 aa9.04□□□□□ -0.96
CCL28-201ENST00000361115 TPM3P06753 285 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 MCCP23508 829 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 IRX3P78415 501 aaPredicted RBP9.03□□□□□ -0.96
CCL28-201ENST00000361115 TAF1CQ15572 869 aaPredicted RBP9.03□□□□□ -0.96
CCL28-201ENST00000361115 TWISTNBQ3B726 338 aaPredicted RBP9.03□□□□□ -0.96
CCL28-201ENST00000361115 RBM26Q5T8P6 1007 aaKnown RBP9.03□□□□□ -0.96
CCL28-201ENST00000361115 CD99L2Q8TCZ2 262 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 API5Q9BZZ5 524 aaKnown RBP9.03□□□□□ -0.96
CCL28-201ENST00000361115 IGF2BP3O00425 579 aaKnown RBP eCLIP9.03□□□□□ -0.96
CCL28-201ENST00000361115 FIBPO43427 364 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 DTNBO60941 627 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms