RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SMTNP53814 917 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 CAVIN1Q6NZI2 390 aaKnown RBP8.74□□□□□ -1.01
CLCN3-202ENST00000360642 ZNF790Q6PG37 636 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 ERC1Q8IUD2 1116 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 ZNF280CQ8ND82 737 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 PPP1R9BQ96SB3 815 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 COL18A1P39060 1754 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 RELBQ01201 579 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 DHX37Q8IY37 1157 aaKnown RBP8.74□□□□□ -1.01
CLCN3-202ENST00000360642 AIDAQ96BJ3 306 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 PHACTR1Q9C0D0 580 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 SLC52A2Q9HAB3 445 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 ECHDC1Q9NTX5 307 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 PLEKHG2Q9H7P9 1386 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 EML1O00423 815 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 DDX58O95786 925 aaKnown RBP8.73□□□□□ -1.01
CLCN3-202ENST00000360642 KCNB2Q92953 911 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 SUCLG2Q96I99 432 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 PA2G4Q9UQ80 394 aaKnown RBP8.73□□□□□ -1.01
CLCN3-202ENST00000360642 C5P01031 1676 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 NPHP3Q7Z494 1330 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 BACH1O14867 736 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 SASH1O94885 1247 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 IGKV5-2P06315 115 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 PHKG2P15735 406 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 NASPP49321 788 aaPredicted RBP8.73□□□□□ -1.01
CLCN3-202ENST00000360642 OS9Q13438 667 aaPredicted RBP8.73□□□□□ -1.01
CLCN3-202ENST00000360642 CWC27Q6UX04 472 aaKnown RBP8.73□□□□□ -1.01
CLCN3-202ENST00000360642 MCF2L2Q86YR7 1114 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 ZBTB24O43167 697 aaPredicted RBP8.73□□□□□ -1.01
CLCN3-202ENST00000360642 DTNBO60941 627 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 PSMA6P60900 246 aaKnown RBP8.73□□□□□ -1.01
CLCN3-202ENST00000360642 NOL8Q76FK4 1167 aaKnown RBP8.73□□□□□ -1.01
CLCN3-202ENST00000360642 LRP10Q7Z4F1 713 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 BICC1Q9H694 974 aaKnown RBP8.73□□□□□ -1.01
CLCN3-202ENST00000360642 NPHS2Q9NP85 383 aa8.73□□□□□ -1.01
CLCN3-202ENST00000360642 NSFL1CQ9UNZ2 370 aaKnown RBP8.73□□□□□ -1.01
CLCN3-202ENST00000360642 MEN1O00255 615 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 FOXK2Q01167 660 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 CCDC173Q0VFZ6 552 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 NXPE4Q6UWF7 544 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
CLCN3-202ENST00000360642 GJD3Q8N144 294 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 IFT43Q96FT9 208 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 TGIF2Q9GZN2 237 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 MRC1P22897 1456 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 MEGF6O75095 1541 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 M0R2N6 131 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 NCLP19338 710 aaKnown RBP8.72□□□□□ -1.01
CLCN3-202ENST00000360642 PHKA2P46019 1235 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 SLC39A6Q13433 755 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 RAPGEF4Q8WZA2 1011 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 EVI5LQ96CN4 794 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 TMEM63CQ9P1W3 806 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 SPG7Q9UQ90 795 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 ERBB4Q15303 1308 aa8.72□□□□□ -1.01
CLCN3-202ENST00000360642 RPAP1Q9BWH6 1393 aaPredicted RBP8.71□□□□□ -1.01
CLCN3-202ENST00000360642 IFIT2P09913 472 aaKnown RBP8.71□□□□□ -1.01
CLCN3-202ENST00000360642 KIAA1211Q6ZU35 1233 aa8.71□□□□□ -1.01
CLCN3-202ENST00000360642 RUFY2Q8WXA3 655 aa8.71□□□□□ -1.01
CLCN3-202ENST00000360642 EAF2Q96CJ1 260 aaPredicted RBP8.71□□□□□ -1.01
CLCN3-202ENST00000360642 DMRTB1Q96MA1 342 aa8.71□□□□□ -1.01
CLCN3-202ENST00000360642 NEURL1BA8MQ27 555 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 MBD3O95983 291 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 AK2P54819 239 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 PTH1RQ03431 593 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 AIMP1Q12904 312 aaKnown RBP8.71□□□□□ -1.02
CLCN3-202ENST00000360642 RUFY3Q7L099 469 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 CCDC116Q8IYX3 515 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 CRELD1Q96HD1 420 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 DCCP43146 1447 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 TATP17735 454 aaPredicted RBP8.71□□□□□ -1.02
CLCN3-202ENST00000360642 GCKRQ14397 625 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 NECTIN1Q15223 517 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 AACSQ86V21 672 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 TM6SF1Q9BZW5 370 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 RBSNQ9H1K0 784 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 DIAPH3Q9NSV4 1193 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 LIMCH1Q9UPQ0 1083 aa8.71□□□□□ -1.02
CLCN3-202ENST00000360642 WDR33Q9C0J8 1336 aaKnown RBP8.7□□□□□ -1.02
CLCN3-202ENST00000360642 TCEAL1Q15170 157 aa8.7□□□□□ -1.02
CLCN3-202ENST00000360642 IFNL2Q8IZJ0 200 aa8.7□□□□□ -1.02
CLCN3-202ENST00000360642 ZNF496Q96IT1 587 aaPredicted RBP8.7□□□□□ -1.02
CLCN3-202ENST00000360642 METTL22Q9BUU2 404 aaPredicted RBP8.7□□□□□ -1.02
CLCN3-202ENST00000360642 NLRP2Q9NX02 1062 aa8.7□□□□□ -1.02
CLCN3-202ENST00000360642 DDX41Q9UJV9 622 aaKnown RBP8.7□□□□□ -1.02
CLCN3-202ENST00000360642 BRD2P25440 801 aaKnown RBP8.7□□□□□ -1.02
CLCN3-202ENST00000360642 G3BP1Q13283 466 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLCN3-202ENST00000360642 TRIP4Q15650 581 aaPredicted RBP8.7□□□□□ -1.02
CLCN3-202ENST00000360642 RC3H1Q5TC82 1133 aaKnown RBP8.7□□□□□ -1.02
CLCN3-202ENST00000360642 LRSAM1Q6UWE0 723 aa8.7□□□□□ -1.02
CLCN3-202ENST00000360642 XAGE3Q8WTP9 111 aa8.7□□□□□ -1.02
CLCN3-202ENST00000360642 SRA1Q9HD15 236 aaKnown RBP8.7□□□□□ -1.02
CLCN3-202ENST00000360642 PKD1L3Q7Z443 1732 aa8.7□□□□□ -1.02
CLCN3-202ENST00000360642 COL15A1P39059 1388 aa8.7□□□□□ -1.02
CLCN3-202ENST00000360642 SERTM1A2A2V5 107 aa8.69□□□□□ -1.02
CLCN3-202ENST00000360642 NOS2P35228 1153 aa8.69□□□□□ -1.02
CLCN3-202ENST00000360642 VPS53Q5VIR6 699 aa8.69□□□□□ -1.02
CLCN3-202ENST00000360642 COPS6Q7L5N1 327 aa8.69□□□□□ -1.02
CLCN3-202ENST00000360642 ITPKCQ96DU7 683 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms