RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 TTC6Q86TZ1 520 aa7.69□□□□□ -1.18
SUDS3-201ENST00000360286 FOXP4Q8IVH2 680 aaPredicted RBP7.69□□□□□ -1.18
SUDS3-201ENST00000360286 ZKSCAN4Q969J2 545 aaPredicted RBP7.69□□□□□ -1.18
SUDS3-201ENST00000360286 KLRG1Q96E93 195 aa7.69□□□□□ -1.18
SUDS3-201ENST00000360286 DYNLL2Q96FJ2 89 aa7.69□□□□□ -1.18
SUDS3-201ENST00000360286 CLMNQ96JQ2 1002 aa7.69□□□□□ -1.18
SUDS3-201ENST00000360286 ZNF341Q9BYN7 854 aa7.69□□□□□ -1.18
SUDS3-201ENST00000360286 DHX36Q9H2U1 1008 aaKnown RBP7.69□□□□□ -1.18
SUDS3-201ENST00000360286 CCDC171Q6TFL3 1326 aa7.69□□□□□ -1.18
SUDS3-201ENST00000360286 ATRNL1Q5VV63 1379 aa7.69□□□□□ -1.18
SUDS3-201ENST00000360286 RPAP1Q9BWH6 1393 aaPredicted RBP7.69□□□□□ -1.18
SUDS3-201ENST00000360286 SIPA1L1O43166 1804 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 TBC1D12O60347 775 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 FGAP02671 866 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 HLA-DOAP06340 250 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 IREB2P48200 963 aaKnown RBP7.68□□□□□ -1.18
SUDS3-201ENST00000360286 TDO2P48775 406 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 FKBP1BP68106 108 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 JAG1P78504 1218 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 GRM1Q13255 1194 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 SHROOM1Q2M3G4 852 aaPredicted RBP7.68□□□□□ -1.18
SUDS3-201ENST00000360286 SBK1Q52WX2 424 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 C12orf60Q5U649 245 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 DCAF15Q66K64 600 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 GIMAP6Q6P9H5 292 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.68□□□□□ -1.18
SUDS3-201ENST00000360286 METTL16Q86W50 562 aaKnown RBP7.68□□□□□ -1.18
SUDS3-201ENST00000360286 CRACR2BQ8N4Y2 399 aaPredicted RBP7.68□□□□□ -1.18
SUDS3-201ENST00000360286 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.68□□□□□ -1.18
SUDS3-201ENST00000360286 HOOK2Q96ED9 719 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 WRNIP1Q96S55 665 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 DNAJC18Q9H819 358 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 ELP3Q9H9T3 547 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 INCENPQ9NQS7 918 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 ZNF112Q9UJU3 913 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 NAV1Q8NEY1 1877 aa7.68□□□□□ -1.18
SUDS3-201ENST00000360286 SGSM2O43147 1006 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 CDC45O75419 566 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 GDF11O95390 407 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 ZNF157P51786 506 aaPredicted RBP7.67□□□□□ -1.18
SUDS3-201ENST00000360286 MFAP1P55081 439 aaKnown RBP7.67□□□□□ -1.18
SUDS3-201ENST00000360286 PTH1RQ03431 593 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 CTDSPL2Q05D32 466 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 GABPAQ06546 454 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 MKRN3Q13064 507 aaKnown RBP7.67□□□□□ -1.18
SUDS3-201ENST00000360286 VGLL4Q14135 290 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 ALX1Q15699 326 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 RGMBQ6NW40 437 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 PAXIP1Q6ZW49 1069 aaPredicted RBP7.67□□□□□ -1.18
SUDS3-201ENST00000360286 ANKRD13AQ8IZ07 590 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 DNAJC5GQ8N7S2 189 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 SLC44A5Q8NCS7 719 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 UBE2Q2Q8WVN8 375 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 RUFY2Q8WXA3 655 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 CNKSR2Q8WXI2 1034 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 SLC10A4Q96EP9 437 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 DDRGK1Q96HY6 314 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 ZIC5Q96T25 663 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 ESYT1Q9BSJ8 1104 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 TRIM34Q9BYJ4 488 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 NACAP1Q9BZK3 213 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 NAPBQ9H115 298 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.67□□□□□ -1.18
SUDS3-201ENST00000360286 HERC5Q9UII4 1024 aaKnown RBP7.67□□□□□ -1.18
SUDS3-201ENST00000360286 SERPINB13Q9UIV8 391 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 TACC3Q9Y6A5 838 aa7.67□□□□□ -1.18
SUDS3-201ENST00000360286 COL2A1P02458 1487 aaPredicted RBP7.67□□□□□ -1.18
SUDS3-201ENST00000360286 PAPPA2Q9BXP8 1791 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 RASSF10A6NK89 507 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 FAM155AB1AL88 458 aaPredicted RBP7.66□□□□□ -1.18
SUDS3-201ENST00000360286 AOC2O75106 756 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 SHMT1P34896 483 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 GJA5P36382 358 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 CAP2P40123 477 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 CDK8P49336 464 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 VEGFBP49765 207 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 HAND2P61296 217 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 PPARAQ07869 468 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 CERKLQ49MI3 558 aaPredicted RBP7.66□□□□□ -1.18
SUDS3-201ENST00000360286 TATDN1Q6P1N9 297 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 CCDC84Q86UT8 332 aaPredicted RBP7.66□□□□□ -1.18
SUDS3-201ENST00000360286 RASAL3Q86YV0 1011 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 AMOTL1Q8IY63 956 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 HHIPL1Q96JK4 782 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 CAPNS2Q96L46 248 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 DSCC1Q9BVC3 393 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 EHD4Q9H223 541 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 ARPP21Q9UBL0 812 aaPredicted RBP7.66□□□□□ -1.18
SUDS3-201ENST00000360286 CSADQ9Y600 493 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 SNCAIPQ9Y6H5 919 aa7.66□□□□□ -1.18
SUDS3-201ENST00000360286 DDX60LQ5H9U9 1706 aaKnown RBP7.66□□□□□ -1.18
SUDS3-201ENST00000360286 UNCXA6NJT0 531 aa7.65□□□□□ -1.18
SUDS3-201ENST00000360286 CTNND1O60716 968 aaKnown RBP7.65□□□□□ -1.18
SUDS3-201ENST00000360286 PRDM1O75626 825 aa7.65□□□□□ -1.18
SUDS3-201ENST00000360286 SLC10A3P09131 477 aa7.65□□□□□ -1.18
SUDS3-201ENST00000360286 AKR1B1P15121 316 aa7.65□□□□□ -1.18
SUDS3-201ENST00000360286 NOL9Q5SY16 702 aaKnown RBP7.65□□□□□ -1.18
SUDS3-201ENST00000360286 C16orf86Q6ZW13 317 aa7.65□□□□□ -1.18
SUDS3-201ENST00000360286 SCYL3Q8IZE3 742 aa7.65□□□□□ -1.18
SUDS3-201ENST00000360286 NKX2-3Q8TAU0 364 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms